RNA–Protein interactions for RNA: ENST00000533728.1

CHKA-207, Transcript of choline kinase alpha, humanhuman

TSL 2

Gene CHKA, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-207ENST00000533728 PLCB2Q00722 1185 aa11.03□□□□□ -0.64
CHKA-207ENST00000533728 NIM1KQ8IY84 436 aa11.03□□□□□ -0.64
CHKA-207ENST00000533728 DAGLBQ8NCG7 672 aa11.03□□□□□ -0.64
CHKA-207ENST00000533728 SUPT20HQ8NEM7 779 aa11.03□□□□□ -0.64
CHKA-207ENST00000533728 PRIMPOLQ96LW4 560 aa11.03□□□□□ -0.64
CHKA-207ENST00000533728 NAP1L5Q96NT1 182 aaPredicted RBP11.03□□□□□ -0.64
CHKA-207ENST00000533728 GDF15Q99988 308 aa11.03□□□□□ -0.64
CHKA-207ENST00000533728 COA1Q9GZY4 146 aa11.03□□□□□ -0.64
CHKA-207ENST00000533728 KAT14Q9H8E8 782 aa11.03□□□□□ -0.64
CHKA-207ENST00000533728 DACH1Q9UI36 760 aa11.03□□□□□ -0.64
CHKA-207ENST00000533728 KCNJ14Q9UNX9 436 aa11.03□□□□□ -0.64
CHKA-207ENST00000533728 EPG5Q9HCE0 2579 aa11.03□□□□□ -0.64
CHKA-207ENST00000533728 USP17L8P0C7I0 530 aa11.02□□□□□ -0.65
CHKA-207ENST00000533728 MDM2Q00987 491 aaPredicted RBP11.02□□□□□ -0.65
CHKA-207ENST00000533728 SEMA3FQ13275 785 aa11.02□□□□□ -0.65
CHKA-207ENST00000533728 FAM109BQ6ICB4 259 aaPredicted RBP11.02□□□□□ -0.65
CHKA-207ENST00000533728 C16orf86Q6ZW13 317 aa11.02□□□□□ -0.65
CHKA-207ENST00000533728 TDHQ8IZJ6 230 aa11.02□□□□□ -0.65
CHKA-207ENST00000533728 ZNF444Q8N0Y2 327 aaPredicted RBP11.02□□□□□ -0.65
CHKA-207ENST00000533728 CNNM3Q8NE01 707 aa11.02□□□□□ -0.65
CHKA-207ENST00000533728 TBC1D16Q8TBP0 767 aa11.02□□□□□ -0.65
CHKA-207ENST00000533728 SH3RF3Q8TEJ3 882 aaPredicted RBP11.02□□□□□ -0.65
CHKA-207ENST00000533728 OSBPL5Q9H0X9 879 aaPredicted RBP11.02□□□□□ -0.65
CHKA-207ENST00000533728 KCNF1Q9H3M0 494 aa11.02□□□□□ -0.65
CHKA-207ENST00000533728 TTC12Q9H892 705 aaPredicted RBP11.02□□□□□ -0.65
CHKA-207ENST00000533728 KCND1Q9NSA2 647 aa11.02□□□□□ -0.65
CHKA-207ENST00000533728 CLIP2Q9UDT6 1046 aa11.02□□□□□ -0.65
CHKA-207ENST00000533728 V9GY48 417 aaPredicted RBP11.02□□□□□ -0.65
CHKA-207ENST00000533728 ATRXP46100 2492 aa11.01□□□□□ -0.65
CHKA-207ENST00000533728 UNC79Q9P2D8 2635 aa11.01□□□□□ -0.65
CHKA-207ENST00000533728 PLEKHA8P1O95397 391 aa11.01□□□□□ -0.65
CHKA-207ENST00000533728 ALDH1A1P00352 501 aa11.01□□□□□ -0.65
CHKA-207ENST00000533728 KCNJ6P48051 423 aa11.01□□□□□ -0.65
CHKA-207ENST00000533728 SARSP49591 514 aaKnown RBP11.01□□□□□ -0.65
CHKA-207ENST00000533728 TFAP4Q01664 338 aa11.01□□□□□ -0.65
CHKA-207ENST00000533728 NR5A1Q13285 461 aa11.01□□□□□ -0.65
CHKA-207ENST00000533728 NCAPHQ15003 741 aa11.01□□□□□ -0.65
CHKA-207ENST00000533728 NPY5RQ15761 445 aa11.01□□□□□ -0.65
CHKA-207ENST00000533728 DPCR1Q3MIW9 517 aa11.01□□□□□ -0.65
CHKA-207ENST00000533728 ARL6IP4Q66PJ3 421 aaKnown RBP11.01□□□□□ -0.65
CHKA-207ENST00000533728 CCDC186Q7Z3E2 898 aa11.01□□□□□ -0.65
CHKA-207ENST00000533728 UBE2Q1Q7Z7E8 422 aa11.01□□□□□ -0.65
CHKA-207ENST00000533728 METTL16Q86W50 562 aaKnown RBP11.01□□□□□ -0.65
CHKA-207ENST00000533728 DRC7Q8IY82 874 aa11.01□□□□□ -0.65
CHKA-207ENST00000533728 SRBD1Q8N5C6 995 aaKnown RBP11.01□□□□□ -0.65
CHKA-207ENST00000533728 AOPEPQ8N6M6 819 aa11.01□□□□□ -0.65
CHKA-207ENST00000533728 MLKLQ8NB16 471 aa11.01□□□□□ -0.65
CHKA-207ENST00000533728 CCDC148Q8NFR7 591 aa11.01□□□□□ -0.65
CHKA-207ENST00000533728 NEDD1Q8NHV4 660 aa11.01□□□□□ -0.65
CHKA-207ENST00000533728 SPATA20Q8TB22 786 aa11.01□□□□□ -0.65
CHKA-207ENST00000533728 COL26A1Q96A83 441 aa11.01□□□□□ -0.65
CHKA-207ENST00000533728 MKNK2Q9HBH9 465 aa11.01□□□□□ -0.65
CHKA-207ENST00000533728 CABP5Q9NP86 173 aa11.01□□□□□ -0.65
CHKA-207ENST00000533728 ZBTB12Q9Y330 459 aaPredicted RBP11.01□□□□□ -0.65
CHKA-207ENST00000533728 PCDHB6Q9Y5E3 794 aa11.01□□□□□ -0.65
CHKA-207ENST00000533728 ALPK3Q96L96 1907 aa11□□□□□ -0.65
CHKA-207ENST00000533728 PALM3A6NDB9 673 aaPredicted RBP11□□□□□ -0.65
CHKA-207ENST00000533728 UBE2Q2LH0YL09 131 aa11□□□□□ -0.65
CHKA-207ENST00000533728 POTEB2H3BUK9 544 aa11□□□□□ -0.65
CHKA-207ENST00000533728 hCG_1984214I3L0E3 225 aa11□□□□□ -0.65
CHKA-207ENST00000533728 SMIM22K7EJ46 135 aa11□□□□□ -0.65
CHKA-207ENST00000533728 CBFA2T2O43439 604 aa11□□□□□ -0.65
CHKA-207ENST00000533728 PRDM1O75626 825 aa11□□□□□ -0.65
CHKA-207ENST00000533728 TSPY3P0CV98 308 aa11□□□□□ -0.65
CHKA-207ENST00000533728 TSPY8P0CW00 308 aa11□□□□□ -0.65
CHKA-207ENST00000533728 CYP2D6P10635 497 aa11□□□□□ -0.65
CHKA-207ENST00000533728 RASA1P20936 1047 aa11□□□□□ -0.65
CHKA-207ENST00000533728 BTDP43251 543 aa11□□□□□ -0.65
CHKA-207ENST00000533728 FKBP1AP62942 108 aaKnown RBP11□□□□□ -0.65
CHKA-207ENST00000533728 ATP2C1P98194 919 aaPredicted RBP11□□□□□ -0.65
CHKA-207ENST00000533728 MYL5Q02045 173 aa11□□□□□ -0.65
CHKA-207ENST00000533728 CXCL9Q07325 125 aa11□□□□□ -0.65
CHKA-207ENST00000533728 MKRN3Q13064 507 aaKnown RBP11□□□□□ -0.65
CHKA-207ENST00000533728 ORC2Q13416 577 aaPredicted RBP11□□□□□ -0.65
CHKA-207ENST00000533728 POSTNQ15063 836 aa11□□□□□ -0.65
CHKA-207ENST00000533728 PPP4R3BQ5MIZ7 849 aa11□□□□□ -0.65
CHKA-207ENST00000533728 TTC38Q5R3I4 469 aa11□□□□□ -0.65
CHKA-207ENST00000533728 DPP8Q6V1X1 898 aaPredicted RBP11□□□□□ -0.65
CHKA-207ENST00000533728 SLC51AQ86UW1 340 aa11□□□□□ -0.65
CHKA-207ENST00000533728 ZNF713Q8N859 430 aaPredicted RBP11□□□□□ -0.65
CHKA-207ENST00000533728 PNMA1Q8ND90 353 aa11□□□□□ -0.65
CHKA-207ENST00000533728 OXER1Q8TDS5 423 aa11□□□□□ -0.65
CHKA-207ENST00000533728 TGFBRAP1Q8WUH2 860 aa11□□□□□ -0.65
CHKA-207ENST00000533728 DCPSQ96C86 337 aaKnown RBP11□□□□□ -0.65
CHKA-207ENST00000533728 CLIC6Q96NY7 704 aa11□□□□□ -0.65
CHKA-207ENST00000533728 MRIQ9BWK5 157 aa11□□□□□ -0.65
CHKA-207ENST00000533728 SPZ1Q9BXG8 430 aa11□□□□□ -0.65
CHKA-207ENST00000533728 TMX4Q9H1E5 349 aaPredicted RBP11□□□□□ -0.65
CHKA-207ENST00000533728 IL17RBQ9NRM6 502 aa11□□□□□ -0.65
CHKA-207ENST00000533728 VPS54Q9P1Q0 977 aa11□□□□□ -0.65
CHKA-207ENST00000533728 POLLQ9UGP5 575 aa11□□□□□ -0.65
CHKA-207ENST00000533728 PTCH2Q9Y6C5 1203 aa11□□□□□ -0.65
CHKA-207ENST00000533728 CFAP54Q96N23 3096 aa11□□□□□ -0.65
CHKA-207ENST00000533728 H7C1D1 291 aa10.99□□□□□ -0.65
CHKA-207ENST00000533728 LAD1O00515 517 aa10.99□□□□□ -0.65
CHKA-207ENST00000533728 ACTN4O43707 911 aaKnown RBP10.99□□□□□ -0.65
CHKA-207ENST00000533728 SMC2O95347 1197 aa10.99□□□□□ -0.65
CHKA-207ENST00000533728 PTGS1P23219 599 aa10.99□□□□□ -0.65
CHKA-207ENST00000533728 RHBDL3P58872 404 aa10.99□□□□□ -0.65
CHKA-207ENST00000533728 FKBP1BP68106 108 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms