RNA–Protein interactions for RNA: ENST00000533632.5

TRAPPC4-214, Transcript of trafficking protein particle complex 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC4, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-214ENST00000533632 NOM1Q5C9Z4 860 aaKnown RBP15.53■□□□□ 0.08
TRAPPC4-214ENST00000533632 SYDE2Q5VT97 1194 aa15.53■□□□□ 0.08
TRAPPC4-214ENST00000533632 SAMD1Q6SPF0 538 aaPredicted RBP15.53■□□□□ 0.08
TRAPPC4-214ENST00000533632 C17orf99Q6UX52 265 aa15.53■□□□□ 0.08
TRAPPC4-214ENST00000533632 MTMR8Q96EF0 704 aa15.53■□□□□ 0.08
TRAPPC4-214ENST00000533632 AIFM3Q96NN9 605 aa15.53■□□□□ 0.08
TRAPPC4-214ENST00000533632 LZTS2Q9BRK4 669 aa15.53■□□□□ 0.08
TRAPPC4-214ENST00000533632 ZFYVE28Q9HCC9 887 aa15.53■□□□□ 0.08
TRAPPC4-214ENST00000533632 VAT1LQ9HCJ6 419 aa15.53■□□□□ 0.08
TRAPPC4-214ENST00000533632 FEM1BQ9UK73 627 aa15.53■□□□□ 0.08
TRAPPC4-214ENST00000533632 V9GY48 417 aaPredicted RBP15.53■□□□□ 0.08
TRAPPC4-214ENST00000533632 HTTP42858 3142 aa15.52■□□□□ 0.08
TRAPPC4-214ENST00000533632 GPR25O00155 361 aa15.52■□□□□ 0.08
TRAPPC4-214ENST00000533632 BCRP11274 1271 aa15.52■□□□□ 0.08
TRAPPC4-214ENST00000533632 SMARCA1P28370 1054 aa15.52■□□□□ 0.08
TRAPPC4-214ENST00000533632 IKQ13123 557 aaPredicted RBP15.52■□□□□ 0.08
TRAPPC4-214ENST00000533632 KIFC2Q96AC6 838 aa15.52■□□□□ 0.08
TRAPPC4-214ENST00000533632 SHISA4Q96DD7 197 aa15.52■□□□□ 0.08
TRAPPC4-214ENST00000533632 PIGSQ96S52 555 aa15.52■□□□□ 0.08
TRAPPC4-214ENST00000533632 PARK7Q99497 189 aaKnown RBP15.52■□□□□ 0.08
TRAPPC4-214ENST00000533632 P2RX7Q99572 595 aaKnown RBP15.52■□□□□ 0.08
TRAPPC4-214ENST00000533632 SLF1Q9BQI6 1058 aa15.52■□□□□ 0.08
TRAPPC4-214ENST00000533632 PPP1R9AQ9ULJ8 1098 aa15.52■□□□□ 0.08
TRAPPC4-214ENST00000533632 DOCK3Q8IZD9 2030 aa15.52■□□□□ 0.08
TRAPPC4-214ENST00000533632 USP17L15C9J2P7 530 aa15.52■□□□□ 0.07
TRAPPC4-214ENST00000533632 USP17L13C9JLJ4 530 aa15.52■□□□□ 0.07
TRAPPC4-214ENST00000533632 USP17L11C9JVI0 530 aa15.52■□□□□ 0.07
TRAPPC4-214ENST00000533632 USP17L18D6R9N7 530 aa15.52■□□□□ 0.07
TRAPPC4-214ENST00000533632 USP17L22D6RA61 530 aa15.52■□□□□ 0.07
TRAPPC4-214ENST00000533632 USP17L17D6RBQ6 530 aa15.52■□□□□ 0.07
TRAPPC4-214ENST00000533632 USP17L19D6RCP7 530 aa15.52■□□□□ 0.07
TRAPPC4-214ENST00000533632 USP17L20D6RJB6 530 aa15.52■□□□□ 0.07
TRAPPC4-214ENST00000533632 PEX10O60683 326 aa15.52■□□□□ 0.07
TRAPPC4-214ENST00000533632 PPP1R11O60927 126 aaPredicted RBP15.52■□□□□ 0.07
TRAPPC4-214ENST00000533632 BRD1O95696 1058 aa15.52■□□□□ 0.07
TRAPPC4-214ENST00000533632 TAL1P17542 331 aaPredicted RBP15.52■□□□□ 0.07
TRAPPC4-214ENST00000533632 PDCP20941 246 aa15.52■□□□□ 0.07
TRAPPC4-214ENST00000533632 USP17L24Q0WX57 530 aa15.52■□□□□ 0.07
TRAPPC4-214ENST00000533632 FAM160B2Q86V87 743 aa15.52■□□□□ 0.07
TRAPPC4-214ENST00000533632 HOMER1Q86YM7 354 aa15.52■□□□□ 0.07
TRAPPC4-214ENST00000533632 ATG4CQ96DT6 458 aa15.52■□□□□ 0.07
TRAPPC4-214ENST00000533632 RNF26Q9BY78 433 aaPredicted RBP15.52■□□□□ 0.07
TRAPPC4-214ENST00000533632 ORC3Q9UBD5 711 aaPredicted RBP15.52■□□□□ 0.07
TRAPPC4-214ENST00000533632 STK36Q9NRP7 1315 aa15.51■□□□□ 0.07
TRAPPC4-214ENST00000533632 SPDYE16A6NNV3 312 aaPredicted RBP15.51■□□□□ 0.07
TRAPPC4-214ENST00000533632 GOLGA6L22H0YM25 854 aa15.51■□□□□ 0.07
TRAPPC4-214ENST00000533632 PRPF3O43395 683 aaKnown RBP15.51■□□□□ 0.07
TRAPPC4-214ENST00000533632 CDKL5O76039 1030 aa15.51■□□□□ 0.07
TRAPPC4-214ENST00000533632 GJB2P29033 226 aa15.51■□□□□ 0.07
TRAPPC4-214ENST00000533632 SSRP1Q08945 709 aaKnown RBP15.51■□□□□ 0.07
TRAPPC4-214ENST00000533632 CPLX2Q6PUV4 134 aaKnown RBP15.51■□□□□ 0.07
TRAPPC4-214ENST00000533632 CHURC1Q8WUH1 139 aa15.51■□□□□ 0.07
TRAPPC4-214ENST00000533632 ZNF296Q8WUU4 475 aaPredicted RBP15.51■□□□□ 0.07
TRAPPC4-214ENST00000533632 CPA4Q9UI42 421 aa15.51■□□□□ 0.07
TRAPPC4-214ENST00000533632 ADAMTS5Q9UNA0 930 aa15.51■□□□□ 0.07
TRAPPC4-214ENST00000533632 DSG3P32926 999 aa15.5■□□□□ 0.07
TRAPPC4-214ENST00000533632 HERVK_113P62684 666 aa15.5■□□□□ 0.07
TRAPPC4-214ENST00000533632 PABPC4Q13310 644 aaKnown RBP eCLIP15.5■□□□□ 0.078e-8■■■■□ 23
TRAPPC4-214ENST00000533632 CDC37Q16543 378 aaPredicted RBP15.5■□□□□ 0.07
TRAPPC4-214ENST00000533632 QRICH1Q2TAL8 776 aa15.5■□□□□ 0.07
TRAPPC4-214ENST00000533632 PRPF38AQ8NAV1 312 aaKnown RBP15.5■□□□□ 0.07
TRAPPC4-214ENST00000533632 RANBP17Q9H2T7 1088 aaKnown RBP15.5■□□□□ 0.07
TRAPPC4-214ENST00000533632 TXNRD2Q9NNW7 524 aa15.5■□□□□ 0.07
TRAPPC4-214ENST00000533632 GJB4Q9NTQ9 266 aa15.5■□□□□ 0.07
TRAPPC4-214ENST00000533632 PNMA3Q9UL41 463 aa15.5■□□□□ 0.07
TRAPPC4-214ENST00000533632 VWA5AO00534 786 aa15.49■□□□□ 0.07
TRAPPC4-214ENST00000533632 CNMDO75829 334 aa15.49■□□□□ 0.07
TRAPPC4-214ENST00000533632 OSBPP22059 807 aa15.49■□□□□ 0.07
TRAPPC4-214ENST00000533632 CTGFP29279 349 aa15.49■□□□□ 0.07
TRAPPC4-214ENST00000533632 IRX3P78415 501 aaPredicted RBP15.49■□□□□ 0.07
TRAPPC4-214ENST00000533632 COG2Q14746 738 aa15.49■□□□□ 0.07
TRAPPC4-214ENST00000533632 TYW1BQ6NUM6 668 aa15.49■□□□□ 0.07
TRAPPC4-214ENST00000533632 TRIM22Q8IYM9 498 aa15.49■□□□□ 0.07
TRAPPC4-214ENST00000533632 REPS2Q8NFH8 660 aa15.49■□□□□ 0.07
TRAPPC4-214ENST00000533632 GPKOWQ92917 476 aaPredicted RBP eCLIP15.49■□□□□ 0.07
TRAPPC4-214ENST00000533632 RBPJLQ9UBG7 517 aa15.49■□□□□ 0.07
TRAPPC4-214ENST00000533632 KIF3AQ9Y496 699 aa15.49■□□□□ 0.07
TRAPPC4-214ENST00000533632 ZNF536O15090 1300 aa15.49■□□□□ 0.07
TRAPPC4-214ENST00000533632 ZBTB5O15062 677 aa15.49■□□□□ 0.07
TRAPPC4-214ENST00000533632 HMGN5P82970 282 aaKnown RBP15.49■□□□□ 0.07
TRAPPC4-214ENST00000533632 PFKFB3Q16875 520 aaPredicted RBP15.49■□□□□ 0.07
TRAPPC4-214ENST00000533632 LBX2Q6XYB7 198 aa15.49■□□□□ 0.07
TRAPPC4-214ENST00000533632 RRP36Q96EU6 259 aaKnown RBP15.49■□□□□ 0.07
TRAPPC4-214ENST00000533632 SLC38A10Q9HBR0 1119 aa15.49■□□□□ 0.07
TRAPPC4-214ENST00000533632 ZDHHC9Q9Y397 364 aa15.49■□□□□ 0.07
TRAPPC4-214ENST00000533632 MYPNQ86TC9 1320 aa15.48■□□□□ 0.07
TRAPPC4-214ENST00000533632 CENPFP49454 3210 aa15.48■□□□□ 0.07
TRAPPC4-214ENST00000533632 STX6O43752 255 aa15.48■□□□□ 0.07
TRAPPC4-214ENST00000533632 DEXIO95424 95 aa15.48■□□□□ 0.07
TRAPPC4-214ENST00000533632 SCG2P13521 617 aa15.48■□□□□ 0.07
TRAPPC4-214ENST00000533632 SYT1P21579 422 aa15.48■□□□□ 0.07
TRAPPC4-214ENST00000533632 FOSBP53539 338 aa15.48■□□□□ 0.07
TRAPPC4-214ENST00000533632 PKP1Q13835 747 aa15.48■□□□□ 0.07
TRAPPC4-214ENST00000533632 WWC2Q6AWC2 1192 aa15.48■□□□□ 0.07
TRAPPC4-214ENST00000533632 CCDC174Q6PII3 467 aa15.48■□□□□ 0.07
TRAPPC4-214ENST00000533632 SMCR8Q8TEV9 937 aaPredicted RBP15.48■□□□□ 0.07
TRAPPC4-214ENST00000533632 PRDM10Q9NQV6 1147 aa15.48■□□□□ 0.07
TRAPPC4-214ENST00000533632 PLXNB2O15031 1838 aa15.48■□□□□ 0.07
TRAPPC4-214ENST00000533632 PNMA6FA0A0J9YX94 578 aa15.47■□□□□ 0.07
TRAPPC4-214ENST00000533632 BAG4O95429 457 aaKnown RBP15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 442.1 ms