RNA–Protein interactions for RNA: ENST00000533402.5

CSRP1-218, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 8,475 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-218ENST00000533402 ZMYND10O75800 440 aa8.59□□□□□ -1.03
CSRP1-218ENST00000533402 KCNA4P22459 653 aa8.59□□□□□ -1.03
CSRP1-218ENST00000533402 STAMBPL1Q96FJ0 436 aa8.59□□□□□ -1.03
CSRP1-218ENST00000533402 ABCB6Q9NP58 842 aa8.59□□□□□ -1.03
CSRP1-218ENST00000533402 EPS15L1Q9UBC2 864 aa8.59□□□□□ -1.03
CSRP1-218ENST00000533402 KRT14P02533 472 aa8.59□□□□□ -1.03
CSRP1-218ENST00000533402 PMS1P54277 932 aaKnown RBP8.59□□□□□ -1.03
CSRP1-218ENST00000533402 ZNF653Q96CK0 615 aa8.59□□□□□ -1.03
CSRP1-218ENST00000533402 DDX28Q9NUL7 540 aaKnown RBP8.59□□□□□ -1.03
CSRP1-218ENST00000533402 GIMAP4Q9NUV9 329 aa8.59□□□□□ -1.03
CSRP1-218ENST00000533402 FBXO2Q9UK22 296 aaPredicted RBP8.59□□□□□ -1.03
CSRP1-218ENST00000533402 RANBP6O60518 1105 aaKnown RBP8.59□□□□□ -1.04
CSRP1-218ENST00000533402 ZNF202O95125 648 aa8.59□□□□□ -1.04
CSRP1-218ENST00000533402 EEF1B2P24534 225 aaKnown RBP8.59□□□□□ -1.04
CSRP1-218ENST00000533402 PEX26Q7Z412 305 aa8.59□□□□□ -1.04
CSRP1-218ENST00000533402 IQUBQ8NA54 791 aa8.59□□□□□ -1.04
CSRP1-218ENST00000533402 IP6K1Q92551 441 aa8.59□□□□□ -1.04
CSRP1-218ENST00000533402 CCDC138Q96M89 665 aa8.59□□□□□ -1.04
CSRP1-218ENST00000533402 TUBB6Q9BUF5 446 aa8.59□□□□□ -1.04
CSRP1-218ENST00000533402 ZC3H12CQ9C0D7 883 aaKnown RBP8.59□□□□□ -1.04
CSRP1-218ENST00000533402 TCP1P17987 556 aaKnown RBP8.58□□□□□ -1.04
CSRP1-218ENST00000533402 HAND2P61296 217 aa8.58□□□□□ -1.04
CSRP1-218ENST00000533402 FLCNQ8NFG4 579 aa8.58□□□□□ -1.04
CSRP1-218ENST00000533402 CCT6BQ92526 530 aa8.58□□□□□ -1.04
CSRP1-218ENST00000533402 SH3GL2Q99962 352 aa8.58□□□□□ -1.04
CSRP1-218ENST00000533402 SPINK5Q9NQ38 1064 aaPredicted RBP8.58□□□□□ -1.04
CSRP1-218ENST00000533402 ETAA1Q9NY74 926 aa8.58□□□□□ -1.04
CSRP1-218ENST00000533402 ZNF219Q9P2Y4 722 aaPredicted RBP8.58□□□□□ -1.04
CSRP1-218ENST00000533402 RCN2Q14257 317 aa8.58□□□□□ -1.04
CSRP1-218ENST00000533402 BEND3Q5T5X7 828 aa8.58□□□□□ -1.04
CSRP1-218ENST00000533402 CACTINQ8WUQ7 758 aaKnown RBP8.58□□□□□ -1.04
CSRP1-218ENST00000533402 SDCCAG3Q96C92 435 aa8.58□□□□□ -1.04
CSRP1-218ENST00000533402 DBNLQ9UJU6 430 aaKnown RBP8.58□□□□□ -1.04
CSRP1-218ENST00000533402 TEX9Q8N6V9 391 aa8.58□□□□□ -1.04
CSRP1-218ENST00000533402 PTPDC1A2A3K4 754 aa8.58□□□□□ -1.04
CSRP1-218ENST00000533402 CRCPO75575 148 aa8.58□□□□□ -1.04
CSRP1-218ENST00000533402 TPP2P29144 1249 aaPredicted RBP8.58□□□□□ -1.04
CSRP1-218ENST00000533402 NMIQ13287 307 aaPredicted RBP8.58□□□□□ -1.04
CSRP1-218ENST00000533402 RRS1Q15050 365 aaKnown RBP8.58□□□□□ -1.04
CSRP1-218ENST00000533402 PPP2R5EQ16537 467 aa8.58□□□□□ -1.04
CSRP1-218ENST00000533402 GRAMD1BQ3KR37 738 aa8.58□□□□□ -1.04
CSRP1-218ENST00000533402 CC2D1AQ6P1N0 951 aaPredicted RBP8.58□□□□□ -1.04
CSRP1-218ENST00000533402 CCDC89Q8N998 374 aa8.58□□□□□ -1.04
CSRP1-218ENST00000533402 TTLL11Q8NHH1 800 aa8.58□□□□□ -1.04
CSRP1-218ENST00000533402 PPWD1Q96BP3 646 aaKnown RBP8.58□□□□□ -1.04
CSRP1-218ENST00000533402 PNMA2Q9UL42 364 aa8.58□□□□□ -1.04
CSRP1-218ENST00000533402 MROH2AA6NES4 1674 aa8.58□□□□□ -1.04
CSRP1-218ENST00000533402 ZBTB43O43298 467 aa8.58□□□□□ -1.04
CSRP1-218ENST00000533402 PDCLQ13371 301 aa8.58□□□□□ -1.04
CSRP1-218ENST00000533402 PRDM4Q9UKN5 801 aa8.58□□□□□ -1.04
CSRP1-218ENST00000533402 KDM2BQ8NHM5 1336 aa8.58□□□□□ -1.04
CSRP1-218ENST00000533402 KRIT1O00522 736 aa8.58□□□□□ -1.04
CSRP1-218ENST00000533402 FOXO3O43524 673 aa8.58□□□□□ -1.04
CSRP1-218ENST00000533402 BRD1O95696 1058 aa8.58□□□□□ -1.04
CSRP1-218ENST00000533402 ARHGAP4P98171 946 aa8.58□□□□□ -1.04
CSRP1-218ENST00000533402 USP32Q8NFA0 1604 aa8.58□□□□□ -1.04
CSRP1-218ENST00000533402 STX10O60499 249 aa8.58□□□□□ -1.04
CSRP1-218ENST00000533402 MCF2P10911 925 aa8.58□□□□□ -1.04
CSRP1-218ENST00000533402 TNFAIP1Q13829 316 aa8.58□□□□□ -1.04
CSRP1-218ENST00000533402 NME9Q86XW9 330 aa8.58□□□□□ -1.04
CSRP1-218ENST00000533402 KSR1Q8IVT5 923 aa8.58□□□□□ -1.04
CSRP1-218ENST00000533402 ANKRD2Q9GZV1 360 aa8.58□□□□□ -1.04
CSRP1-218ENST00000533402 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.58□□□□□ -1.04
CSRP1-218ENST00000533402 SCHIP1Q9P0W5 487 aaPredicted RBP8.58□□□□□ -1.04
CSRP1-218ENST00000533402 KCNH3Q9ULD8 1083 aa8.58□□□□□ -1.04
CSRP1-218ENST00000533402 PPRC1Q5VV67 1664 aaKnown RBP8.57□□□□□ -1.04
CSRP1-218ENST00000533402 CDK12Q9NYV4 1490 aaPredicted RBP8.57□□□□□ -1.04
CSRP1-218ENST00000533402 UQCRFS1P1P0C7P4 283 aa8.57□□□□□ -1.04
CSRP1-218ENST00000533402 IL2RBP14784 551 aa8.57□□□□□ -1.04
CSRP1-218ENST00000533402 RBM17Q96I25 401 aaKnown RBP8.57□□□□□ -1.04
CSRP1-218ENST00000533402 CYTH2Q99418 400 aa8.57□□□□□ -1.04
CSRP1-218ENST00000533402 PTCH1Q13635 1447 aa8.57□□□□□ -1.04
CSRP1-218ENST00000533402 PPLO60437 1756 aa8.57□□□□□ -1.04
CSRP1-218ENST00000533402 GNAQP50148 359 aa8.57□□□□□ -1.04
CSRP1-218ENST00000533402 TMTC3Q6ZXV5 915 aa8.57□□□□□ -1.04
CSRP1-218ENST00000533402 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.57□□□□□ -1.04
CSRP1-218ENST00000533402 HAUS4Q9H6D7 363 aa8.57□□□□□ -1.04
CSRP1-218ENST00000533402 RAP1GDS1P52306 607 aa8.57□□□□□ -1.04
CSRP1-218ENST00000533402 KLC1Q07866 573 aa8.57□□□□□ -1.04
CSRP1-218ENST00000533402 RILPL1Q5EBL4 403 aa8.57□□□□□ -1.04
CSRP1-218ENST00000533402 VPS37BQ9H9H4 285 aa8.57□□□□□ -1.04
CSRP1-218ENST00000533402 F6X3S4 739 aa8.57□□□□□ -1.04
CSRP1-218ENST00000533402 FNBP4Q8N3X1 1017 aaPredicted RBP8.57□□□□□ -1.04
CSRP1-218ENST00000533402 CARD10Q9BWT7 1032 aa8.57□□□□□ -1.04
CSRP1-218ENST00000533402 TPCN1Q9ULQ1 816 aa8.57□□□□□ -1.04
CSRP1-218ENST00000533402 CFAP73A6NFT4 308 aa8.57□□□□□ -1.04
CSRP1-218ENST00000533402 BLMP54132 1417 aaPredicted RBP8.57□□□□□ -1.04
CSRP1-218ENST00000533402 CYLC2Q14093 348 aaPredicted RBP8.57□□□□□ -1.04
CSRP1-218ENST00000533402 ZNF354CQ86Y25 554 aa8.57□□□□□ -1.04
CSRP1-218ENST00000533402 ARL10Q8N8L6 244 aa8.57□□□□□ -1.04
CSRP1-218ENST00000533402 CASP10Q92851 521 aa8.57□□□□□ -1.04
CSRP1-218ENST00000533402 THUMPD2Q9BTF0 503 aaKnown RBP8.57□□□□□ -1.04
CSRP1-218ENST00000533402 ABCA6Q8N139 1617 aa8.57□□□□□ -1.04
CSRP1-218ENST00000533402 HELLSQ9NRZ9 838 aa8.57□□□□□ -1.04
CSRP1-218ENST00000533402 NCAPD2Q15021 1401 aa8.57□□□□□ -1.04
CSRP1-218ENST00000533402 PALM3A6NDB9 673 aaPredicted RBP8.56□□□□□ -1.04
CSRP1-218ENST00000533402 PTCD1O75127 700 aaKnown RBP8.56□□□□□ -1.04
CSRP1-218ENST00000533402 SPAG7O75391 227 aa8.56□□□□□ -1.04
CSRP1-218ENST00000533402 CALM1P0DP23 149 aa8.56□□□□□ -1.04
CSRP1-218ENST00000533402 CALM2P0DP24 149 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms