RNA–Protein interactions for RNA: ENST00000533309.5

TRIM3-213, Transcript of tripartite motif containing 3, humanhuman

TSL 2

Gene TRIM3, Length 1,647 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-213ENST00000533309 GBA2Q9HCG7 927 aaPredicted RBP18.34■□□□□ 0.53
TRIM3-213ENST00000533309 TFIP11Q9UBB9 837 aaKnown RBP18.34■□□□□ 0.53
TRIM3-213ENST00000533309 FAM205CA6NFA0 338 aa18.34■□□□□ 0.53
TRIM3-213ENST00000533309 UNCXA6NJT0 531 aa18.34■□□□□ 0.53
TRIM3-213ENST00000533309 DDX11L8A8MPP1 907 aa18.34■□□□□ 0.53
TRIM3-213ENST00000533309 FIBPO43427 364 aa18.34■□□□□ 0.53
TRIM3-213ENST00000533309 NCLP19338 710 aaKnown RBP18.34■□□□□ 0.53
TRIM3-213ENST00000533309 NOM1Q5C9Z4 860 aaKnown RBP18.34■□□□□ 0.53
TRIM3-213ENST00000533309 GALNT17Q6IS24 598 aa18.34■□□□□ 0.53
TRIM3-213ENST00000533309 BLIDQ8IZY5 108 aa18.34■□□□□ 0.53
TRIM3-213ENST00000533309 TMEM87AQ8NBN3 555 aa18.34■□□□□ 0.53
TRIM3-213ENST00000533309 USP28Q96RU2 1077 aa18.34■□□□□ 0.53
TRIM3-213ENST00000533309 SLF1Q9BQI6 1058 aa18.34■□□□□ 0.53
TRIM3-213ENST00000533309 TANGO6Q9C0B7 1094 aa18.34■□□□□ 0.53
TRIM3-213ENST00000533309 BRMS1Q9HCU9 246 aa18.34■□□□□ 0.53
TRIM3-213ENST00000533309 KCNH4Q9UQ05 1017 aa18.34■□□□□ 0.53
TRIM3-213ENST00000533309 SMCO2A6NFE2 343 aa18.33■□□□□ 0.52
TRIM3-213ENST00000533309 CELF2O95319 508 aaKnown RBP18.33■□□□□ 0.52
TRIM3-213ENST00000533309 PPIL2Q13356 520 aa18.33■□□□□ 0.52
TRIM3-213ENST00000533309 OPTNQ96CV9 577 aa18.33■□□□□ 0.52
TRIM3-213ENST00000533309 AMNQ9BXJ7 453 aa18.33■□□□□ 0.52
TRIM3-213ENST00000533309 LMBRD1Q9NUN5 540 aa18.33■□□□□ 0.52
TRIM3-213ENST00000533309 PPP1R9AQ9ULJ8 1098 aa18.33■□□□□ 0.52
TRIM3-213ENST00000533309 A0A0G2JLL6 359 aaPredicted RBP18.32■□□□□ 0.52
TRIM3-213ENST00000533309 GOLGA6L22H0YM25 854 aa18.32■□□□□ 0.52
TRIM3-213ENST00000533309 FLOT1O75955 427 aa18.32■□□□□ 0.52
TRIM3-213ENST00000533309 TAL1P17542 331 aaPredicted RBP18.32■□□□□ 0.52
TRIM3-213ENST00000533309 GJA5P36382 358 aa18.32■□□□□ 0.52
TRIM3-213ENST00000533309 CST9Q5W186 159 aa18.32■□□□□ 0.52
TRIM3-213ENST00000533309 ATL3Q6DD88 541 aa18.32■□□□□ 0.52
TRIM3-213ENST00000533309 PRRT2Q7Z6L0 340 aaPredicted RBP18.32■□□□□ 0.52
TRIM3-213ENST00000533309 FBXO11Q86XK2 927 aa18.32■□□□□ 0.52
TRIM3-213ENST00000533309 PRPF38AQ8NAV1 312 aaKnown RBP18.32■□□□□ 0.52
TRIM3-213ENST00000533309 RASGRP4Q8TDF6 673 aa18.32■□□□□ 0.52
TRIM3-213ENST00000533309 C6orf50Q9HD87 102 aa18.32■□□□□ 0.52
TRIM3-213ENST00000533309 TMOD4Q9NZQ9 345 aa18.32■□□□□ 0.52
TRIM3-213ENST00000533309 PCDHA1Q9Y5I3 950 aa18.32■□□□□ 0.52
TRIM3-213ENST00000533309 A0A0G2JMZ2 1700 aa18.32■□□□□ 0.52
TRIM3-213ENST00000533309 TOB1P50616 345 aaPredicted RBP18.31■□□□□ 0.52
TRIM3-213ENST00000533309 ZNF396Q96N95 335 aaPredicted RBP18.31■□□□□ 0.52
TRIM3-213ENST00000533309 GPBP1L1Q9HC44 474 aaPredicted RBP18.31■□□□□ 0.52
TRIM3-213ENST00000533309 PCDHA6Q9UN73 950 aa18.31■□□□□ 0.52
TRIM3-213ENST00000533309 PCDHA8Q9Y5H6 950 aa18.31■□□□□ 0.52
TRIM3-213ENST00000533309 ZNF536O15090 1300 aa18.31■□□□□ 0.52
TRIM3-213ENST00000533309 RBBP6Q7Z6E9 1792 aaKnown RBP18.31■□□□□ 0.52
TRIM3-213ENST00000533309 CXCL11O14625 94 aa18.31■□□□□ 0.52
TRIM3-213ENST00000533309 GNA11P29992 359 aa18.31■□□□□ 0.52
TRIM3-213ENST00000533309 TREML2Q5T2D2 321 aa18.31■□□□□ 0.52
TRIM3-213ENST00000533309 SAMD1Q6SPF0 538 aaPredicted RBP18.31■□□□□ 0.52
TRIM3-213ENST00000533309 LEO1Q8WVC0 666 aaPredicted RBP18.31■□□□□ 0.52
TRIM3-213ENST00000533309 SCAND2PQ9GZW5 306 aaPredicted RBP18.31■□□□□ 0.52
TRIM3-213ENST00000533309 RIC8AQ9NPQ8 531 aa18.31■□□□□ 0.52
TRIM3-213ENST00000533309 CFAP45Q9UL16 551 aa18.31■□□□□ 0.52
TRIM3-213ENST00000533309 MYH7BA7E2Y1 1941 aa18.3■□□□□ 0.52
TRIM3-213ENST00000533309 KIF3CO14782 793 aa18.3■□□□□ 0.52
TRIM3-213ENST00000533309 PRPF40AO75400 957 aaKnown RBP18.3■□□□□ 0.52
TRIM3-213ENST00000533309 ADCY7P51828 1080 aa18.3■□□□□ 0.52
TRIM3-213ENST00000533309 CEBPZQ03701 1054 aaKnown RBP18.3■□□□□ 0.52
TRIM3-213ENST00000533309 MOGSQ13724 837 aa18.3■□□□□ 0.52
TRIM3-213ENST00000533309 NBR1Q14596 966 aa18.3■□□□□ 0.52
TRIM3-213ENST00000533309 USH1GQ495M9 461 aa18.3■□□□□ 0.52
TRIM3-213ENST00000533309 CCDC174Q6PII3 467 aa18.3■□□□□ 0.52
TRIM3-213ENST00000533309 CATSPERGQ6ZRH7 1159 aa18.3■□□□□ 0.52
TRIM3-213ENST00000533309 C2orf69Q8N8R5 385 aa18.3■□□□□ 0.52
TRIM3-213ENST00000533309 SLC10A4Q96EP9 437 aa18.3■□□□□ 0.52
TRIM3-213ENST00000533309 SLC38A10Q9HBR0 1119 aa18.3■□□□□ 0.52
TRIM3-213ENST00000533309 POLR3EQ9NVU0 708 aa18.3■□□□□ 0.52
TRIM3-213ENST00000533309 RTEL1Q9NZ71 1219 aa18.3■□□□□ 0.52
TRIM3-213ENST00000533309 CLIC4Q9Y696 253 aa18.3■□□□□ 0.52
TRIM3-213ENST00000533309 ELP1O95163 1332 aa18.29■□□□□ 0.52
TRIM3-213ENST00000533309 OPLAHO14841 1288 aa18.29■□□□□ 0.52
TRIM3-213ENST00000533309 NASPP49321 788 aaPredicted RBP18.29■□□□□ 0.52
TRIM3-213ENST00000533309 PIK3AP1Q6ZUJ8 805 aa18.29■□□□□ 0.52
TRIM3-213ENST00000533309 REXO1Q8N1G1 1221 aaKnown RBP18.29■□□□□ 0.52
TRIM3-213ENST00000533309 PROCA1Q8NCQ7 364 aaPredicted RBP18.29■□□□□ 0.52
TRIM3-213ENST00000533309 ATG4CQ96DT6 458 aa18.29■□□□□ 0.52
TRIM3-213ENST00000533309 WNK4Q96J92 1243 aa18.29■□□□□ 0.52
TRIM3-213ENST00000533309 SPATA32Q96LK8 384 aa18.29■□□□□ 0.52
TRIM3-213ENST00000533309 RCOR1Q9UKL0 485 aa18.29■□□□□ 0.52
TRIM3-213ENST00000533309 USP17L15C9J2P7 530 aa18.28■□□□□ 0.52
TRIM3-213ENST00000533309 USP17L13C9JLJ4 530 aa18.28■□□□□ 0.52
TRIM3-213ENST00000533309 USP17L11C9JVI0 530 aa18.28■□□□□ 0.52
TRIM3-213ENST00000533309 USP17L18D6R9N7 530 aa18.28■□□□□ 0.52
TRIM3-213ENST00000533309 USP17L22D6RA61 530 aa18.28■□□□□ 0.52
TRIM3-213ENST00000533309 USP17L17D6RBQ6 530 aa18.28■□□□□ 0.52
TRIM3-213ENST00000533309 USP17L19D6RCP7 530 aa18.28■□□□□ 0.52
TRIM3-213ENST00000533309 USP17L20D6RJB6 530 aa18.28■□□□□ 0.52
TRIM3-213ENST00000533309 WNT7AO00755 349 aa18.28■□□□□ 0.52
TRIM3-213ENST00000533309 CLK2P49760 499 aaKnown RBP18.28■□□□□ 0.52
TRIM3-213ENST00000533309 USP17L24Q0WX57 530 aa18.28■□□□□ 0.52
TRIM3-213ENST00000533309 RILPL1Q5EBL4 403 aa18.28■□□□□ 0.52
TRIM3-213ENST00000533309 ANO1Q5XXA6 986 aa18.28■□□□□ 0.52
TRIM3-213ENST00000533309 BICD2Q8TD16 824 aa18.28■□□□□ 0.52
TRIM3-213ENST00000533309 CUL5Q93034 780 aa18.28■□□□□ 0.52
TRIM3-213ENST00000533309 ADAMTS5Q9UNA0 930 aa18.28■□□□□ 0.52
TRIM3-213ENST00000533309 PASKQ96RG2 1323 aa18.28■□□□□ 0.52
TRIM3-213ENST00000533309 VWA5AO00534 786 aa18.27■□□□□ 0.52
TRIM3-213ENST00000533309 GADD45BO75293 160 aaPredicted RBP18.27■□□□□ 0.52
TRIM3-213ENST00000533309 ICAM1P05362 532 aa18.27■□□□□ 0.52
TRIM3-213ENST00000533309 DSG3P32926 999 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms