RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 CCDC50Q8IVM0 306 aa13.55□□□□□ -0.24
BDNF-218ENST00000533246 TBC1D22AQ8WUA7 517 aa13.55□□□□□ -0.24
BDNF-218ENST00000533246 ADGRB3O60242 1522 aa13.54□□□□□ -0.24
BDNF-218ENST00000533246 PPIP5K2O43314 1243 aa13.54□□□□□ -0.24
BDNF-218ENST00000533246 CAND2O75155 1236 aa13.54□□□□□ -0.24
BDNF-218ENST00000533246 ABCB4P21439 1286 aa13.54□□□□□ -0.24
BDNF-218ENST00000533246 LIFRP42702 1097 aa13.54□□□□□ -0.24
BDNF-218ENST00000533246 LLGL1Q15334 1064 aa13.54□□□□□ -0.24
BDNF-218ENST00000533246 TMEM87AQ8NBN3 555 aa13.54□□□□□ -0.24
BDNF-218ENST00000533246 N4BP2L2Q92802 583 aaPredicted RBP13.54□□□□□ -0.24
BDNF-218ENST00000533246 PIGSQ96S52 555 aa13.54□□□□□ -0.24
BDNF-218ENST00000533246 TMEM232C9JQI7 657 aa13.54□□□□□ -0.24
BDNF-218ENST00000533246 GTPBP6O43824 516 aaPredicted RBP13.54□□□□□ -0.24
BDNF-218ENST00000533246 SEC31AO94979 1220 aaKnown RBP13.54□□□□□ -0.24
BDNF-218ENST00000533246 RBL2Q08999 1139 aa13.54□□□□□ -0.24
BDNF-218ENST00000533246 ATP6V0A2Q9Y487 856 aa13.54□□□□□ -0.24
BDNF-218ENST00000533246 EPN1Q9Y6I3 576 aaPredicted RBP13.54□□□□□ -0.24
BDNF-218ENST00000533246 CLRN2A0PK11 232 aa13.54□□□□□ -0.24
BDNF-218ENST00000533246 KRT5P13647 590 aa13.54□□□□□ -0.24
BDNF-218ENST00000533246 GUCY1A2P33402 732 aa13.54□□□□□ -0.24
BDNF-218ENST00000533246 DBN1Q16643 649 aa13.54□□□□□ -0.24
BDNF-218ENST00000533246 ADAT2Q7Z6V5 191 aaKnown RBP13.54□□□□□ -0.24
BDNF-218ENST00000533246 ACRBPQ8NEB7 543 aa13.54□□□□□ -0.24
BDNF-218ENST00000533246 UBLCP1Q8WVY7 318 aaPredicted RBP13.54□□□□□ -0.24
BDNF-218ENST00000533246 GJA10Q969M2 543 aa13.54□□□□□ -0.24
BDNF-218ENST00000533246 THRAP3Q9Y2W1 955 aaKnown RBP13.54□□□□□ -0.24
BDNF-218ENST00000533246 SOWAHDA6NJG2 315 aa13.53□□□□□ -0.24
BDNF-218ENST00000533246 CYP2J2P51589 502 aa13.53□□□□□ -0.24
BDNF-218ENST00000533246 CYP27A1Q02318 531 aa13.53□□□□□ -0.24
BDNF-218ENST00000533246 GRM1Q13255 1194 aa13.53□□□□□ -0.24
BDNF-218ENST00000533246 TRIM14Q14142 442 aa13.53□□□□□ -0.24
BDNF-218ENST00000533246 NBPF9Q3BBW0 867 aa13.53□□□□□ -0.24
BDNF-218ENST00000533246 CCDC84Q86UT8 332 aaPredicted RBP13.53□□□□□ -0.24
BDNF-218ENST00000533246 TBCKQ8TEA7 893 aa13.53□□□□□ -0.24
BDNF-218ENST00000533246 KAZALD1Q96I82 304 aa13.53□□□□□ -0.24
BDNF-218ENST00000533246 MORC2Q9Y6X9 1032 aaPredicted RBP13.53□□□□□ -0.24
BDNF-218ENST00000533246 CROCC2H7BZ55 1655 aa13.53□□□□□ -0.24
BDNF-218ENST00000533246 CEP152O94986 1710 aa13.53□□□□□ -0.24
BDNF-218ENST00000533246 TNFAIP3P21580 790 aa13.53□□□□□ -0.24
BDNF-218ENST00000533246 COPB1P53618 953 aaKnown RBP13.53□□□□□ -0.24
BDNF-218ENST00000533246 SLC35F6Q8N357 371 aa13.53□□□□□ -0.24
BDNF-218ENST00000533246 MRRFQ96E11 262 aaKnown RBP13.53□□□□□ -0.24
BDNF-218ENST00000533246 SELENOSQ9BQE4 189 aa13.53□□□□□ -0.24
BDNF-218ENST00000533246 ISCA1Q9BUE6 129 aa13.53□□□□□ -0.24
BDNF-218ENST00000533246 GDAQ9Y2T3 454 aa13.53□□□□□ -0.24
BDNF-218ENST00000533246 SAR1BQ9Y6B6 198 aa13.53□□□□□ -0.24
BDNF-218ENST00000533246 ARAP3Q8WWN8 1544 aa13.53□□□□□ -0.24
BDNF-218ENST00000533246 FAM196BA6NMK8 535 aa13.53□□□□□ -0.24
BDNF-218ENST00000533246 ERVV-1B6SEH8 477 aa13.53□□□□□ -0.24
BDNF-218ENST00000533246 KIF28PB7ZC32 967 aa13.53□□□□□ -0.24
BDNF-218ENST00000533246 GCOM1H8Y6P7 765 aaPredicted RBP13.53□□□□□ -0.24
BDNF-218ENST00000533246 SERPINB2P05120 415 aa13.53□□□□□ -0.24
BDNF-218ENST00000533246 MYZAPP0CAP1 466 aa13.53□□□□□ -0.24
BDNF-218ENST00000533246 CYP19A1P11511 503 aaPredicted RBP13.53□□□□□ -0.24
BDNF-218ENST00000533246 PABPC4Q13310 644 aaKnown RBP eCLIP13.53□□□□□ -0.24
BDNF-218ENST00000533246 NAIF1Q69YI7 327 aaPredicted RBP13.53□□□□□ -0.24
BDNF-218ENST00000533246 GSTA5Q7RTV2 222 aa13.53□□□□□ -0.24
BDNF-218ENST00000533246 TUBGCP2Q9BSJ2 902 aa13.53□□□□□ -0.24
BDNF-218ENST00000533246 SENP2Q9HC62 589 aa13.53□□□□□ -0.24
BDNF-218ENST00000533246 KIAA1024Q9UPX6 916 aa13.53□□□□□ -0.24
BDNF-218ENST00000533246 MRPS25P82663 173 aaKnown RBP13.52□□□□□ -0.24
BDNF-218ENST00000533246 SMC1AQ14683 1233 aaKnown RBP13.52□□□□□ -0.24
BDNF-218ENST00000533246 ASIC2Q16515 512 aa13.52□□□□□ -0.24
BDNF-218ENST00000533246 CERKLQ49MI3 558 aaPredicted RBP13.52□□□□□ -0.24
BDNF-218ENST00000533246 LMBR1Q8WVP7 490 aa13.52□□□□□ -0.24
BDNF-218ENST00000533246 PDLIM2Q96JY6 352 aa13.52□□□□□ -0.24
BDNF-218ENST00000533246 NOX5Q96PH1 765 aa13.52□□□□□ -0.24
BDNF-218ENST00000533246 GSDMAQ96QA5 445 aa13.52□□□□□ -0.24
BDNF-218ENST00000533246 MINPP1Q9UNW1 487 aa13.52□□□□□ -0.24
BDNF-218ENST00000533246 QRICH2Q9H0J4 1663 aa13.52□□□□□ -0.24
BDNF-218ENST00000533246 USP27XA6NNY8 438 aa13.52□□□□□ -0.25
BDNF-218ENST00000533246 H7C1D1 291 aa13.52□□□□□ -0.25
BDNF-218ENST00000533246 SPOPO43791 374 aa13.52□□□□□ -0.25
BDNF-218ENST00000533246 OPA1O60313 960 aa13.52□□□□□ -0.25
BDNF-218ENST00000533246 PDIA6Q15084 440 aa13.52□□□□□ -0.25
BDNF-218ENST00000533246 MB21D2Q8IYB1 491 aaPredicted RBP13.52□□□□□ -0.25
BDNF-218ENST00000533246 MYOCDQ8IZQ8 938 aa13.52□□□□□ -0.25
BDNF-218ENST00000533246 FMR1NBQ8N0W7 255 aaPredicted RBP13.52□□□□□ -0.25
BDNF-218ENST00000533246 LZTS2Q9BRK4 669 aa13.52□□□□□ -0.25
BDNF-218ENST00000533246 ARHGEF10LQ9HCE6 1279 aa13.52□□□□□ -0.25
BDNF-218ENST00000533246 GDF11O95390 407 aa13.52□□□□□ -0.25
BDNF-218ENST00000533246 SNAP25P60880 206 aa13.52□□□□□ -0.25
BDNF-218ENST00000533246 POLR2FP61218 127 aaKnown RBP13.52□□□□□ -0.25
BDNF-218ENST00000533246 DLGAP5Q15398 846 aa13.52□□□□□ -0.25
BDNF-218ENST00000533246 CLEC17AQ6ZS10 378 aa13.52□□□□□ -0.25
BDNF-218ENST00000533246 USP31Q70CQ4 1352 aa13.51□□□□□ -0.25
BDNF-218ENST00000533246 GSG1L2A8MUP6 293 aa13.51□□□□□ -0.25
BDNF-218ENST00000533246 MEIS1O00470 390 aa13.51□□□□□ -0.25
BDNF-218ENST00000533246 DDAH1O94760 285 aa13.51□□□□□ -0.25
BDNF-218ENST00000533246 CYP2C19P33261 490 aa13.51□□□□□ -0.25
BDNF-218ENST00000533246 SLFN13Q68D06 897 aa13.51□□□□□ -0.25
BDNF-218ENST00000533246 TRIML1Q8N9V2 468 aa13.51□□□□□ -0.25
BDNF-218ENST00000533246 STX10O60499 249 aa13.51□□□□□ -0.25
BDNF-218ENST00000533246 DESP17661 470 aa13.51□□□□□ -0.25
BDNF-218ENST00000533246 DNM2P50570 870 aa13.51□□□□□ -0.25
BDNF-218ENST00000533246 NEDD9Q14511 834 aa13.51□□□□□ -0.25
BDNF-218ENST00000533246 OTUD6BQ8N6M0 293 aa13.51□□□□□ -0.25
BDNF-218ENST00000533246 NUP58Q9BVL2 599 aa13.51□□□□□ -0.25
BDNF-218ENST00000533246 LSM14BQ9BX40 385 aaKnown RBP13.51□□□□□ -0.25
BDNF-218ENST00000533246 ATP2B4P23634 1241 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms