RNA–Protein interactions for RNA: ENST00000533189.1

CTNND1-235, Transcript of catenin delta 1, humanhuman

TSL 3

Gene CTNND1, Length 498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-235ENST00000533189 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.82□□□□□ -0.36
CTNND1-235ENST00000533189 BCL11AQ9H165 835 aa12.82□□□□□ -0.36
CTNND1-235ENST00000533189 HIPK3Q9H422 1215 aa12.82□□□□□ -0.36
CTNND1-235ENST00000533189 CXXC1Q9P0U4 656 aaPredicted RBP12.82□□□□□ -0.36
CTNND1-235ENST00000533189 RIPK3Q9Y572 518 aa12.82□□□□□ -0.36
CTNND1-235ENST00000533189 ATP2A1O14983 1001 aa12.81□□□□□ -0.36
CTNND1-235ENST00000533189 ADCY6O43306 1168 aa12.81□□□□□ -0.36
CTNND1-235ENST00000533189 CD4P01730 458 aa12.81□□□□□ -0.36
CTNND1-235ENST00000533189 PPP2R2DQ66LE6 453 aa12.81□□□□□ -0.36
CTNND1-235ENST00000533189 NOL8Q76FK4 1167 aaKnown RBP12.81□□□□□ -0.36
CTNND1-235ENST00000533189 ARMCX2Q7L311 632 aa12.81□□□□□ -0.36
CTNND1-235ENST00000533189 OTOP2Q7RTS6 562 aa12.81□□□□□ -0.36
CTNND1-235ENST00000533189 PAG1Q9NWQ8 432 aa12.81□□□□□ -0.36
CTNND1-235ENST00000533189 FBXO40Q9UH90 709 aa12.81□□□□□ -0.36
CTNND1-235ENST00000533189 YBX2Q9Y2T7 364 aaKnown RBP12.81□□□□□ -0.36
CTNND1-235ENST00000533189 SLC4A4Q9Y6R1 1079 aa12.81□□□□□ -0.36
CTNND1-235ENST00000533189 GREB1LQ9C091 1923 aaPredicted RBP12.81□□□□□ -0.36
CTNND1-235ENST00000533189 F5H6K3 240 aa12.8□□□□□ -0.36
CTNND1-235ENST00000533189 CABYRO75952 493 aa12.8□□□□□ -0.36
CTNND1-235ENST00000533189 BEX3Q00994 111 aa12.8□□□□□ -0.36
CTNND1-235ENST00000533189 KLRC3Q07444 240 aa12.8□□□□□ -0.36
CTNND1-235ENST00000533189 SKIV2LQ15477 1246 aaKnown RBP12.8□□□□□ -0.36
CTNND1-235ENST00000533189 SLFNL1Q499Z3 407 aa12.8□□□□□ -0.36
CTNND1-235ENST00000533189 RPUSD2Q8IZ73 545 aaKnown RBP12.8□□□□□ -0.36
CTNND1-235ENST00000533189 CHST13Q8NET6 341 aa12.8□□□□□ -0.36
CTNND1-235ENST00000533189 KIFC2Q96AC6 838 aa12.8□□□□□ -0.36
CTNND1-235ENST00000533189 KIF1BPQ96EK5 621 aa12.8□□□□□ -0.36
CTNND1-235ENST00000533189 NECAB3Q96P71 396 aaPredicted RBP12.8□□□□□ -0.36
CTNND1-235ENST00000533189 RAVER2Q9HCJ3 691 aaKnown RBP12.8□□□□□ -0.36
CTNND1-235ENST00000533189 SLC4A7Q9Y6M7 1214 aa12.8□□□□□ -0.36
CTNND1-235ENST00000533189 PRRC2BQ5JSZ5 2229 aaKnown RBP12.8□□□□□ -0.36
CTNND1-235ENST00000533189 XIRP2A4UGR9 3374 aa12.79□□□□□ -0.36
CTNND1-235ENST00000533189 ZBBXA8MT70 800 aa12.79□□□□□ -0.36
CTNND1-235ENST00000533189 NDUFB10O96000 172 aa12.79□□□□□ -0.36
CTNND1-235ENST00000533189 RLBP1P12271 317 aa12.79□□□□□ -0.36
CTNND1-235ENST00000533189 BMP1P13497 986 aa12.79□□□□□ -0.36
CTNND1-235ENST00000533189 RABGGTBP53611 331 aa12.79□□□□□ -0.36
CTNND1-235ENST00000533189 CCL23P55773 120 aa12.79□□□□□ -0.36
CTNND1-235ENST00000533189 TNFAIP2Q03169 654 aa12.79□□□□□ -0.36
CTNND1-235ENST00000533189 CTR9Q6PD62 1173 aa12.79□□□□□ -0.36
CTNND1-235ENST00000533189 CXCL17Q6UXB2 119 aa12.79□□□□□ -0.36
CTNND1-235ENST00000533189 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.79□□□□□ -0.36
CTNND1-235ENST00000533189 CCDC144CPQ8IYA2 1237 aa12.79□□□□□ -0.36
CTNND1-235ENST00000533189 BOLA2Q9H3K6 86 aa12.79□□□□□ -0.36
CTNND1-235ENST00000533189 MKNK2Q9HBH9 465 aa12.79□□□□□ -0.36
CTNND1-235ENST00000533189 NYAP2Q9P242 653 aa12.79□□□□□ -0.36
CTNND1-235ENST00000533189 ARPP21Q9UBL0 812 aaPredicted RBP12.79□□□□□ -0.36
CTNND1-235ENST00000533189 PCDHA11Q9Y5I1 949 aa12.79□□□□□ -0.36
CTNND1-235ENST00000533189 CTAGE5O15320 804 aa12.78□□□□□ -0.36
CTNND1-235ENST00000533189 GTPBP6O43824 516 aaPredicted RBP12.78□□□□□ -0.36
CTNND1-235ENST00000533189 ZEB2O60315 1214 aa12.78□□□□□ -0.36
CTNND1-235ENST00000533189 NKX3-2P78367 333 aa12.78□□□□□ -0.36
CTNND1-235ENST00000533189 TFF2Q03403 129 aa12.78□□□□□ -0.36
CTNND1-235ENST00000533189 ITGA7Q13683 1181 aa12.78□□□□□ -0.36
CTNND1-235ENST00000533189 ZSCAN25Q6NSZ9 544 aa12.78□□□□□ -0.36
CTNND1-235ENST00000533189 SLC43A3Q8NBI5 491 aa12.78□□□□□ -0.36
CTNND1-235ENST00000533189 FGD4Q96M96 766 aa12.78□□□□□ -0.36
CTNND1-235ENST00000533189 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.78□□□□□ -0.36
CTNND1-235ENST00000533189 SEZ6LQ9BYH1 1024 aa12.78□□□□□ -0.36
CTNND1-235ENST00000533189 AP5M1Q9H0R1 490 aa12.78□□□□□ -0.36
CTNND1-235ENST00000533189 SLC38A10Q9HBR0 1119 aa12.78□□□□□ -0.36
CTNND1-235ENST00000533189 HOMER2Q9NSB8 354 aa12.78□□□□□ -0.36
CTNND1-235ENST00000533189 FEM1BQ9UK73 627 aa12.78□□□□□ -0.36
CTNND1-235ENST00000533189 UMODL1Q5DID0 1318 aa12.78□□□□□ -0.36
CTNND1-235ENST00000533189 ZBED9Q6R2W3 1325 aa12.78□□□□□ -0.36
CTNND1-235ENST00000533189 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.77□□□□□ -0.37
CTNND1-235ENST00000533189 RASA1P20936 1047 aa12.77□□□□□ -0.37
CTNND1-235ENST00000533189 OAZ1P54368 228 aa12.77□□□□□ -0.37
CTNND1-235ENST00000533189 UBE3CQ15386 1083 aa12.77□□□□□ -0.37
CTNND1-235ENST00000533189 FSCN1Q16658 493 aaKnown RBP12.77□□□□□ -0.37
CTNND1-235ENST00000533189 TLK2Q86UE8 772 aa12.77□□□□□ -0.37
CTNND1-235ENST00000533189 STK11IPQ8N1F8 1099 aa12.77□□□□□ -0.37
CTNND1-235ENST00000533189 NOC4LQ9BVI4 516 aaKnown RBP12.77□□□□□ -0.37
CTNND1-235ENST00000533189 KATNBL1Q9H079 304 aa12.77□□□□□ -0.37
CTNND1-235ENST00000533189 CLIP2Q9UDT6 1046 aa12.77□□□□□ -0.37
CTNND1-235ENST00000533189 HCN4Q9Y3Q4 1203 aa12.77□□□□□ -0.37
CTNND1-235ENST00000533189 ASB14A6NK59 587 aa12.76□□□□□ -0.37
CTNND1-235ENST00000533189 ERC2O15083 957 aa12.76□□□□□ -0.37
CTNND1-235ENST00000533189 B4GALT4O60513 344 aa12.76□□□□□ -0.37
CTNND1-235ENST00000533189 HMMRO75330 724 aa12.76□□□□□ -0.37
CTNND1-235ENST00000533189 FDX1P10109 184 aa12.76□□□□□ -0.37
CTNND1-235ENST00000533189 MYOGP15173 224 aa12.76□□□□□ -0.37
CTNND1-235ENST00000533189 ATP2A2P16615 1042 aaKnown RBP12.76□□□□□ -0.37
CTNND1-235ENST00000533189 ATP5JP18859 108 aa12.76□□□□□ -0.37
CTNND1-235ENST00000533189 HOXD11P31277 338 aaPredicted RBP12.76□□□□□ -0.37
CTNND1-235ENST00000533189 KCNQ1P51787 676 aa12.76□□□□□ -0.37
CTNND1-235ENST00000533189 CNTN2Q02246 1040 aa12.76□□□□□ -0.37
CTNND1-235ENST00000533189 HAUS7Q99871 368 aa12.76□□□□□ -0.37
CTNND1-235ENST00000533189 TRPV6Q9H1D0 765 aa12.76□□□□□ -0.37
CTNND1-235ENST00000533189 WNT8AQ9H1J5 351 aa12.76□□□□□ -0.37
CTNND1-235ENST00000533189 ACAD9Q9H845 621 aa12.76□□□□□ -0.37
CTNND1-235ENST00000533189 ISY1Q9ULR0 285 aaKnown RBP12.76□□□□□ -0.37
CTNND1-235ENST00000533189 ASTN1O14525 1302 aa12.76□□□□□ -0.37
CTNND1-235ENST00000533189 LRRC37A2A6NM11 1700 aa12.75□□□□□ -0.37
CTNND1-235ENST00000533189 MINDY4BA8MYZ0 360 aa12.75□□□□□ -0.37
CTNND1-235ENST00000533189 DYNC1LI2O43237 492 aaPredicted RBP12.75□□□□□ -0.37
CTNND1-235ENST00000533189 RAB11FIP3O75154 756 aa12.75□□□□□ -0.37
CTNND1-235ENST00000533189 CHGBP05060 677 aa12.75□□□□□ -0.37
CTNND1-235ENST00000533189 SBK1Q52WX2 424 aa12.75□□□□□ -0.37
CTNND1-235ENST00000533189 TMEM67Q5HYA8 995 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms