RNA–Protein interactions for RNA: ENST00000533145.5

HIF3A-215, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-215ENST00000533145 LBX2Q6XYB7 198 aa16.26■□□□□ 0.19
HIF3A-215ENST00000533145 HOMER1Q86YM7 354 aa16.26■□□□□ 0.19
HIF3A-215ENST00000533145 KIFC2Q96AC6 838 aa16.26■□□□□ 0.19
HIF3A-215ENST00000533145 PHF20Q9BVI0 1012 aa16.26■□□□□ 0.19
HIF3A-215ENST00000533145 SLC38A10Q9HBR0 1119 aa16.26■□□□□ 0.19
HIF3A-215ENST00000533145 MTMR6Q9Y217 621 aa16.26■□□□□ 0.19
HIF3A-215ENST00000533145 WDR33Q9C0J8 1336 aaKnown RBP16.25■□□□□ 0.19
HIF3A-215ENST00000533145 ESYT2A0FGR8 921 aa16.25■□□□□ 0.19
HIF3A-215ENST00000533145 STXBP3O00186 592 aa16.25■□□□□ 0.19
HIF3A-215ENST00000533145 PPP1R11O60927 126 aaPredicted RBP16.25■□□□□ 0.19
HIF3A-215ENST00000533145 INHBEP58166 350 aa16.25■□□□□ 0.19
HIF3A-215ENST00000533145 TRIM29Q14134 588 aa16.25■□□□□ 0.19
HIF3A-215ENST00000533145 GALNT17Q6IS24 598 aa16.25■□□□□ 0.19
HIF3A-215ENST00000533145 PPP1R18Q6NYC8 613 aa16.25■□□□□ 0.19
HIF3A-215ENST00000533145 ANKRD23Q86SG2 305 aa16.25■□□□□ 0.19
HIF3A-215ENST00000533145 FBXO11Q86XK2 927 aa16.25■□□□□ 0.19
HIF3A-215ENST00000533145 CCDC12Q8WUD4 166 aaPredicted RBP16.25■□□□□ 0.19
HIF3A-215ENST00000533145 SHISA4Q96DD7 197 aa16.25■□□□□ 0.19
HIF3A-215ENST00000533145 AMNQ9BXJ7 453 aa16.25■□□□□ 0.19
HIF3A-215ENST00000533145 CREBZFQ9NS37 354 aa16.25■□□□□ 0.19
HIF3A-215ENST00000533145 ZDHHC9Q9Y397 364 aa16.25■□□□□ 0.19
HIF3A-215ENST00000533145 CCL15-CCL14A0A0B4J2E2 113 aa16.24■□□□□ 0.19
HIF3A-215ENST00000533145 MANSC4A6NHS7 340 aaPredicted RBP16.24■□□□□ 0.19
HIF3A-215ENST00000533145 FAM155AB1AL88 458 aaPredicted RBP16.24■□□□□ 0.19
HIF3A-215ENST00000533145 H3BQV1 296 aa16.24■□□□□ 0.19
HIF3A-215ENST00000533145 VWA5AO00534 786 aa16.24■□□□□ 0.19
HIF3A-215ENST00000533145 ATP2A1O14983 1001 aa16.24■□□□□ 0.19
HIF3A-215ENST00000533145 ZBED4O75132 1171 aa16.24■□□□□ 0.19
HIF3A-215ENST00000533145 MMP1P03956 469 aa16.24■□□□□ 0.19
HIF3A-215ENST00000533145 ZSCAN22P10073 491 aaPredicted RBP16.24■□□□□ 0.19
HIF3A-215ENST00000533145 OSBPP22059 807 aa16.24■□□□□ 0.19
HIF3A-215ENST00000533145 OAZ1P54368 228 aa16.24■□□□□ 0.19
HIF3A-215ENST00000533145 PKP1Q13835 747 aa16.24■□□□□ 0.19
HIF3A-215ENST00000533145 CCL15Q16663 113 aa16.24■□□□□ 0.19
HIF3A-215ENST00000533145 TEX2Q8IWB9 1127 aa16.24■□□□□ 0.19
HIF3A-215ENST00000533145 REPS2Q8NFH8 660 aa16.24■□□□□ 0.19
HIF3A-215ENST00000533145 CCDC148Q8NFR7 591 aa16.24■□□□□ 0.19
HIF3A-215ENST00000533145 PIBF1Q8WXW3 757 aa16.24■□□□□ 0.19
HIF3A-215ENST00000533145 BRI3BPQ8WY22 251 aa16.24■□□□□ 0.19
HIF3A-215ENST00000533145 ZMYND12Q9H0C1 365 aa16.24■□□□□ 0.19
HIF3A-215ENST00000533145 ZCCHC17Q9NP64 241 aaKnown RBP16.24■□□□□ 0.19
HIF3A-215ENST00000533145 VPS54Q9P1Q0 977 aa16.24■□□□□ 0.19
HIF3A-215ENST00000533145 ABT1Q9ULW3 272 aaKnown RBP16.24■□□□□ 0.19
HIF3A-215ENST00000533145 A0A0G2JMZ2 1700 aa16.24■□□□□ 0.19
HIF3A-215ENST00000533145 ZNF536O15090 1300 aa16.23■□□□□ 0.19
HIF3A-215ENST00000533145 RASSF10A6NK89 507 aa16.23■□□□□ 0.19
HIF3A-215ENST00000533145 SPDYE16A6NNV3 312 aaPredicted RBP16.23■□□□□ 0.19
HIF3A-215ENST00000533145 ICAM1P05362 532 aa16.23■□□□□ 0.19
HIF3A-215ENST00000533145 CALML3P27482 149 aa16.23■□□□□ 0.19
HIF3A-215ENST00000533145 NPY5RQ15761 445 aa16.23■□□□□ 0.19
HIF3A-215ENST00000533145 TYW1BQ6NUM6 668 aa16.23■□□□□ 0.19
HIF3A-215ENST00000533145 HEATR3Q7Z4Q2 680 aa16.23■□□□□ 0.19
HIF3A-215ENST00000533145 TNS4Q8IZW8 715 aa16.23■□□□□ 0.19
HIF3A-215ENST00000533145 MB21D1Q8N884 522 aa16.23■□□□□ 0.19
HIF3A-215ENST00000533145 DAGLBQ8NCG7 672 aa16.23■□□□□ 0.19
HIF3A-215ENST00000533145 GPKOWQ92917 476 aaPredicted RBP eCLIP16.23■□□□□ 0.19
HIF3A-215ENST00000533145 ATG4CQ96DT6 458 aa16.23■□□□□ 0.19
HIF3A-215ENST00000533145 ASCC2Q9H1I8 757 aaPredicted RBP16.23■□□□□ 0.19
HIF3A-215ENST00000533145 GJB4Q9NTQ9 266 aa16.23■□□□□ 0.19
HIF3A-215ENST00000533145 BTBD19C9JJ37 291 aa16.22■□□□□ 0.19
HIF3A-215ENST00000533145 IRX3P78415 501 aaPredicted RBP16.22■□□□□ 0.19
HIF3A-215ENST00000533145 OTUD7BQ6GQQ9 843 aa16.22■□□□□ 0.19
HIF3A-215ENST00000533145 GTF3C2Q8WUA4 911 aaPredicted RBP16.22■□□□□ 0.19
HIF3A-215ENST00000533145 COA7Q96BR5 231 aa16.22■□□□□ 0.19
HIF3A-215ENST00000533145 P2RX7Q99572 595 aaKnown RBP16.22■□□□□ 0.19
HIF3A-215ENST00000533145 GLT8D2Q9H1C3 349 aa16.22■□□□□ 0.19
HIF3A-215ENST00000533145 ZSCAN16Q9H4T2 348 aaPredicted RBP16.22■□□□□ 0.19
HIF3A-215ENST00000533145 PNMA3Q9UL41 463 aa16.22■□□□□ 0.19
HIF3A-215ENST00000533145 PCDHA1Q9Y5I3 950 aa16.22■□□□□ 0.19
HIF3A-215ENST00000533145 VPS37CA5D8V6 355 aaPredicted RBP16.21■□□□□ 0.19
HIF3A-215ENST00000533145 F13A1P00488 732 aa16.21■□□□□ 0.19
HIF3A-215ENST00000533145 U2AF2P26368 475 aaKnown RBP eCLIP16.21■□□□□ 0.19
HIF3A-215ENST00000533145 GNA11P29992 359 aa16.21■□□□□ 0.19
HIF3A-215ENST00000533145 NAPAP54920 295 aa16.21■□□□□ 0.19
HIF3A-215ENST00000533145 NLRP5P59047 1200 aa16.21■□□□□ 0.19
HIF3A-215ENST00000533145 SNAP25P60880 206 aa16.21■□□□□ 0.19
HIF3A-215ENST00000533145 GUCY1B3Q02153 619 aa16.21■□□□□ 0.19
HIF3A-215ENST00000533145 MKRN3Q13064 507 aaKnown RBP16.21■□□□□ 0.19
HIF3A-215ENST00000533145 SAFBQ15424 915 aaKnown RBP eCLIP16.21■□□□□ 0.19
HIF3A-215ENST00000533145 DEFB115Q30KQ5 88 aa16.21■□□□□ 0.19
HIF3A-215ENST00000533145 SAMD3Q8N6K7 520 aa16.21■□□□□ 0.19
HIF3A-215ENST00000533145 PTPN18Q99952 460 aa16.21■□□□□ 0.19
HIF3A-215ENST00000533145 MAF1Q9H063 256 aa16.21■□□□□ 0.19
HIF3A-215ENST00000533145 FOXP1Q9H334 677 aaPredicted RBP16.21■□□□□ 0.19
HIF3A-215ENST00000533145 PCDHA4Q9UN74 947 aa16.21■□□□□ 0.19
HIF3A-215ENST00000533145 KCNJ14Q9UNX9 436 aa16.21■□□□□ 0.19
HIF3A-215ENST00000533145 MYH15Q9Y2K3 1946 aa16.21■□□□□ 0.19
HIF3A-215ENST00000533145 ABCB11O95342 1321 aa16.2■□□□□ 0.18
HIF3A-215ENST00000533145 SMCO2A6NFE2 343 aa16.2■□□□□ 0.18
HIF3A-215ENST00000533145 M0R2N6 131 aa16.2■□□□□ 0.18
HIF3A-215ENST00000533145 PDHXO00330 501 aa16.2■□□□□ 0.18
HIF3A-215ENST00000533145 TM4SF4P48230 202 aa16.2■□□□□ 0.18
HIF3A-215ENST00000533145 HERVK_113P62684 666 aa16.2■□□□□ 0.18
HIF3A-215ENST00000533145 KIF23Q02241 960 aaPredicted RBP16.2■□□□□ 0.18
HIF3A-215ENST00000533145 RESTQ13127 1097 aa16.2■□□□□ 0.18
HIF3A-215ENST00000533145 POTEEQ6S8J3 1075 aa16.2■□□□□ 0.18
HIF3A-215ENST00000533145 BICD2Q8TD16 824 aa16.2■□□□□ 0.18
HIF3A-215ENST00000533145 C6orf50Q9HD87 102 aa16.2■□□□□ 0.18
HIF3A-215ENST00000533145 RIC8AQ9NPQ8 531 aa16.2■□□□□ 0.18
HIF3A-215ENST00000533145 ZNF214Q9UL59 606 aaPredicted RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms