RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 CFAP45Q9UL16 551 aa21.26■□□□□ 0.99
SMPD1-208ENST00000533123 PTPRFP10586 1907 aa21.26■□□□□ 0.99
SMPD1-208ENST00000533123 FEM1BQ9UK73 627 aa21.25■□□□□ 0.99
SMPD1-208ENST00000533123 SYCE3A1L190 88 aa21.25■□□□□ 0.99
SMPD1-208ENST00000533123 CXCL11O14625 94 aa21.25■□□□□ 0.99
SMPD1-208ENST00000533123 ZNF445P59923 1031 aa21.25■□□□□ 0.99
SMPD1-208ENST00000533123 MKRN3Q13064 507 aaKnown RBP21.25■□□□□ 0.99
SMPD1-208ENST00000533123 HEATR3Q7Z4Q2 680 aa21.25■□□□□ 0.99
SMPD1-208ENST00000533123 MTMR8Q96EF0 704 aa21.25■□□□□ 0.99
SMPD1-208ENST00000533123 KCNJ14Q9UNX9 436 aa21.25■□□□□ 0.99
SMPD1-208ENST00000533123 KCNH4Q9UQ05 1017 aa21.25■□□□□ 0.99
SMPD1-208ENST00000533123 A0A0G2JLL6 359 aaPredicted RBP21.24■□□□□ 0.99
SMPD1-208ENST00000533123 TRIM29Q14134 588 aa21.24■□□□□ 0.99
SMPD1-208ENST00000533123 WWC2Q6AWC2 1192 aa21.24■□□□□ 0.99
SMPD1-208ENST00000533123 PRRT2Q7Z6L0 340 aaPredicted RBP21.24■□□□□ 0.99
SMPD1-208ENST00000533123 PGBD1Q96JS3 809 aa21.24■□□□□ 0.99
SMPD1-208ENST00000533123 PNMA6FA0A0J9YX94 578 aa21.24■□□□□ 0.99
SMPD1-208ENST00000533123 ZBTB5O15062 677 aa21.24■□□□□ 0.99
SMPD1-208ENST00000533123 FLOT1O75955 427 aa21.24■□□□□ 0.99
SMPD1-208ENST00000533123 CDC37Q16543 378 aaPredicted RBP21.24■□□□□ 0.99
SMPD1-208ENST00000533123 GADL1Q6ZQY3 521 aa21.24■□□□□ 0.99
SMPD1-208ENST00000533123 FAM160B2Q86V87 743 aa21.24■□□□□ 0.99
SMPD1-208ENST00000533123 PLA2G6O60733 806 aa21.23■□□□□ 0.99
SMPD1-208ENST00000533123 PPP1R11O60927 126 aaPredicted RBP21.23■□□□□ 0.99
SMPD1-208ENST00000533123 QRICH1Q2TAL8 776 aa21.23■□□□□ 0.99
SMPD1-208ENST00000533123 TREML2Q5T2D2 321 aa21.23■□□□□ 0.99
SMPD1-208ENST00000533123 TYW1BQ6NUM6 668 aa21.23■□□□□ 0.99
SMPD1-208ENST00000533123 SAPCD2Q86UD0 394 aa21.23■□□□□ 0.99
SMPD1-208ENST00000533123 ZNF396Q96N95 335 aaPredicted RBP21.23■□□□□ 0.99
SMPD1-208ENST00000533123 XBP1P17861 261 aa21.23■□□□□ 0.99
SMPD1-208ENST00000533123 RGS22Q8NE09 1264 aa21.23■□□□□ 0.99
SMPD1-208ENST00000533123 WNK4Q96J92 1243 aa21.23■□□□□ 0.99
SMPD1-208ENST00000533123 SLF1Q9BQI6 1058 aa21.23■□□□□ 0.99
SMPD1-208ENST00000533123 MYSM1Q5VVJ2 828 aa21.22■□□□□ 0.99
SMPD1-208ENST00000533123 BRAPQ7Z569 592 aa21.22■□□□□ 0.99
SMPD1-208ENST00000533123 PRPF38AQ8NAV1 312 aaKnown RBP21.22■□□□□ 0.99
SMPD1-208ENST00000533123 SYAP1Q96A49 352 aaPredicted RBP21.22■□□□□ 0.99
SMPD1-208ENST00000533123 COA7Q96BR5 231 aa21.22■□□□□ 0.99
SMPD1-208ENST00000533123 BARHL2Q9NY43 387 aa21.22■□□□□ 0.99
SMPD1-208ENST00000533123 STXBP3O00186 592 aa21.21■□□□□ 0.99
SMPD1-208ENST00000533123 LIG1P18858 919 aa21.21■□□□□ 0.99
SMPD1-208ENST00000533123 SNAPC2Q13487 334 aa21.21■□□□□ 0.99
SMPD1-208ENST00000533123 L1TD1Q5T7N2 865 aaKnown RBP21.21■□□□□ 0.99
SMPD1-208ENST00000533123 CATSPERGQ6ZRH7 1159 aa21.21■□□□□ 0.99
SMPD1-208ENST00000533123 RCOR1Q9UKL0 485 aa21.21■□□□□ 0.99
SMPD1-208ENST00000533123 CLIC4Q9Y696 253 aa21.21■□□□□ 0.99
SMPD1-208ENST00000533123 GOLGA6L4A6NEF3 574 aa21.2■□□□□ 0.98
SMPD1-208ENST00000533123 MMP1P03956 469 aa21.2■□□□□ 0.98
SMPD1-208ENST00000533123 MOGSQ13724 837 aa21.2■□□□□ 0.98
SMPD1-208ENST00000533123 ATL3Q6DD88 541 aa21.2■□□□□ 0.98
SMPD1-208ENST00000533123 PROCA1Q8NCQ7 364 aaPredicted RBP21.2■□□□□ 0.98
SMPD1-208ENST00000533123 PHF20Q9BVI0 1012 aa21.2■□□□□ 0.98
SMPD1-208ENST00000533123 PPP1R9AQ9ULJ8 1098 aa21.2■□□□□ 0.98
SMPD1-208ENST00000533123 USP17L15C9J2P7 530 aa21.2■□□□□ 0.98
SMPD1-208ENST00000533123 USP17L13C9JLJ4 530 aa21.2■□□□□ 0.98
SMPD1-208ENST00000533123 USP17L11C9JVI0 530 aa21.2■□□□□ 0.98
SMPD1-208ENST00000533123 USP17L18D6R9N7 530 aa21.2■□□□□ 0.98
SMPD1-208ENST00000533123 USP17L22D6RA61 530 aa21.2■□□□□ 0.98
SMPD1-208ENST00000533123 USP17L17D6RBQ6 530 aa21.2■□□□□ 0.98
SMPD1-208ENST00000533123 USP17L19D6RCP7 530 aa21.2■□□□□ 0.98
SMPD1-208ENST00000533123 USP17L20D6RJB6 530 aa21.2■□□□□ 0.98
SMPD1-208ENST00000533123 ZNF157P51786 506 aaPredicted RBP21.2■□□□□ 0.98
SMPD1-208ENST00000533123 NAPAP54920 295 aa21.2■□□□□ 0.98
SMPD1-208ENST00000533123 USP17L24Q0WX57 530 aa21.2■□□□□ 0.98
SMPD1-208ENST00000533123 GNL2Q13823 731 aaKnown RBP21.2■□□□□ 0.98
SMPD1-208ENST00000533123 CCDC183Q5T5S1 534 aa21.2■□□□□ 0.98
SMPD1-208ENST00000533123 SPRYD7Q5W111 196 aa21.2■□□□□ 0.98
SMPD1-208ENST00000533123 CCDC174Q6PII3 467 aa21.2■□□□□ 0.98
SMPD1-208ENST00000533123 GRPEL1Q9HAV7 217 aa21.2■□□□□ 0.98
SMPD1-208ENST00000533123 NLRP5P59047 1200 aa21.19■□□□□ 0.98
SMPD1-208ENST00000533123 RANBP17Q9H2T7 1088 aaKnown RBP21.19■□□□□ 0.98
SMPD1-208ENST00000533123 SH3GLB2Q9NR46 395 aa21.19■□□□□ 0.98
SMPD1-208ENST00000533123 RTEL1Q9NZ71 1219 aa21.19■□□□□ 0.98
SMPD1-208ENST00000533123 BTBD18B2RXH4 712 aa21.19■□□□□ 0.98
SMPD1-208ENST00000533123 XRCC6P12956 609 aaKnown RBP eCLIP21.19■□□□□ 0.98
SMPD1-208ENST00000533123 TAL1P17542 331 aaPredicted RBP21.19■□□□□ 0.98
SMPD1-208ENST00000533123 U2AF2P26368 475 aaKnown RBP eCLIP21.19■□□□□ 0.98
SMPD1-208ENST00000533123 COG2Q14746 738 aa21.19■□□□□ 0.98
SMPD1-208ENST00000533123 USH1GQ495M9 461 aa21.19■□□□□ 0.98
SMPD1-208ENST00000533123 MS4A4AQ96JQ5 239 aa21.19■□□□□ 0.98
SMPD1-208ENST00000533123 ABT1Q9ULW3 272 aaKnown RBP21.19■□□□□ 0.98
SMPD1-208ENST00000533123 PCDHA1Q9Y5I3 950 aa21.19■□□□□ 0.98
SMPD1-208ENST00000533123 FSTL1Q12841 308 aa21.18■□□□□ 0.98
SMPD1-208ENST00000533123 FASTKD5Q7L8L6 764 aaKnown RBP21.18■□□□□ 0.98
SMPD1-208ENST00000533123 FBXO11Q86XK2 927 aa21.18■□□□□ 0.98
SMPD1-208ENST00000533123 DIS3L2Q8IYB7 885 aaKnown RBP21.18■□□□□ 0.98
SMPD1-208ENST00000533123 BICD2Q8TD16 824 aa21.18■□□□□ 0.98
SMPD1-208ENST00000533123 ATG4CQ96DT6 458 aa21.18■□□□□ 0.98
SMPD1-208ENST00000533123 AMNQ9BXJ7 453 aa21.18■□□□□ 0.98
SMPD1-208ENST00000533123 TLL2Q9Y6L7 1015 aa21.18■□□□□ 0.98
SMPD1-208ENST00000533123 SMCHD1A6NHR9 2005 aa21.18■□□□□ 0.98
SMPD1-208ENST00000533123 TMEM88BA6NKF7 163 aa21.17■□□□□ 0.98
SMPD1-208ENST00000533123 ADAMTS3O15072 1205 aa21.17■□□□□ 0.98
SMPD1-208ENST00000533123 ZBTB48P10074 688 aaPredicted RBP21.17■□□□□ 0.98
SMPD1-208ENST00000533123 RGMBQ6NW40 437 aa21.17■□□□□ 0.98
SMPD1-208ENST00000533123 OXER1Q8TDS5 423 aa21.17■□□□□ 0.98
SMPD1-208ENST00000533123 AGTPBP1Q9UPW5 1226 aa21.17■□□□□ 0.98
SMPD1-208ENST00000533123 LOC285556D6RIA3 1793 aa21.17■□□□□ 0.98
SMPD1-208ENST00000533123 DSG3P32926 999 aa21.17■□□□□ 0.98
SMPD1-208ENST00000533123 GTF2A2P52657 109 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms