RNA–Protein interactions for RNA: ENST00000533110.5

CTSB-227, Transcript of cathepsin B, humanhuman

TSL 5

Gene CTSB, Length 399 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-227ENST00000533110 PHOSPHO2Q8TCD6 241 aa11.14□□□□□ -0.63
CTSB-227ENST00000533110 AP5M1Q9H0R1 490 aa11.14□□□□□ -0.63
CTSB-227ENST00000533110 UBE2ZQ9H832 354 aaPredicted RBP11.14□□□□□ -0.63
CTSB-227ENST00000533110 NAV1Q8NEY1 1877 aa11.13□□□□□ -0.63
CTSB-227ENST00000533110 DNAJC25-GNG10A0A024R161 153 aa11.13□□□□□ -0.63
CTSB-227ENST00000533110 PNMA6EA0A0J9YXQ4 647 aa11.13□□□□□ -0.63
CTSB-227ENST00000533110 DCXO43602 365 aa11.13□□□□□ -0.63
CTSB-227ENST00000533110 SUPT20HL2P0C7V6 817 aa11.13□□□□□ -0.63
CTSB-227ENST00000533110 AKR1B1P15121 316 aa11.13□□□□□ -0.63
CTSB-227ENST00000533110 KCNA5P22460 613 aa11.13□□□□□ -0.63
CTSB-227ENST00000533110 TNFAIP2Q03169 654 aa11.13□□□□□ -0.63
CTSB-227ENST00000533110 HERC6Q8IVU3 1022 aa11.13□□□□□ -0.63
CTSB-227ENST00000533110 FAM178BQ8IXR5 827 aa11.13□□□□□ -0.63
CTSB-227ENST00000533110 REPS2Q8NFH8 660 aa11.13□□□□□ -0.63
CTSB-227ENST00000533110 CCDC17Q96LX7 622 aa11.13□□□□□ -0.63
CTSB-227ENST00000533110 SLF1Q9BQI6 1058 aa11.13□□□□□ -0.63
CTSB-227ENST00000533110 RIOK1Q9BRS2 568 aaKnown RBP11.13□□□□□ -0.63
CTSB-227ENST00000533110 LMCD1Q9NZU5 365 aa11.13□□□□□ -0.63
CTSB-227ENST00000533110 CTAGE5O15320 804 aa11.12□□□□□ -0.63
CTSB-227ENST00000533110 EEF2P13639 858 aaKnown RBP11.12□□□□□ -0.63
CTSB-227ENST00000533110 KCNJ6P48051 423 aa11.12□□□□□ -0.63
CTSB-227ENST00000533110 NKX3-2P78367 333 aa11.12□□□□□ -0.63
CTSB-227ENST00000533110 EVX2Q03828 476 aa11.12□□□□□ -0.63
CTSB-227ENST00000533110 LEXMQ3ZCV2 418 aa11.12□□□□□ -0.63
CTSB-227ENST00000533110 SIAH1Q8IUQ4 282 aa11.12□□□□□ -0.63
CTSB-227ENST00000533110 AMOTL1Q8IY63 956 aa11.12□□□□□ -0.63
CTSB-227ENST00000533110 CCDC144CPQ8IYA2 1237 aa11.12□□□□□ -0.63
CTSB-227ENST00000533110 CPXCR1Q8N123 301 aa11.12□□□□□ -0.63
CTSB-227ENST00000533110 GDPD5Q8WTR4 605 aa11.12□□□□□ -0.63
CTSB-227ENST00000533110 DYNLL2Q96FJ2 89 aa11.12□□□□□ -0.63
CTSB-227ENST00000533110 AGBL1Q96MI9 1066 aa11.12□□□□□ -0.63
CTSB-227ENST00000533110 FTOQ9C0B1 505 aaKnown RBP eCLIP11.12□□□□□ -0.63
CTSB-227ENST00000533110 FBXO40Q9UH90 709 aa11.12□□□□□ -0.63
CTSB-227ENST00000533110 DBNLQ9UJU6 430 aaKnown RBP11.12□□□□□ -0.63
CTSB-227ENST00000533110 ZNFX1Q9P2E3 1918 aaKnown RBP11.11□□□□□ -0.63
CTSB-227ENST00000533110 LPXNO60711 386 aa11.11□□□□□ -0.63
CTSB-227ENST00000533110 ZBED4O75132 1171 aa11.11□□□□□ -0.63
CTSB-227ENST00000533110 ARHGEF15O94989 841 aa11.11□□□□□ -0.63
CTSB-227ENST00000533110 CYP2D6P10635 497 aa11.11□□□□□ -0.63
CTSB-227ENST00000533110 CYP2C9P11712 490 aa11.11□□□□□ -0.63
CTSB-227ENST00000533110 IL9P15248 144 aa11.11□□□□□ -0.63
CTSB-227ENST00000533110 RFC2P35250 354 aa11.11□□□□□ -0.63
CTSB-227ENST00000533110 PSMC6P62333 389 aa11.11□□□□□ -0.63
CTSB-227ENST00000533110 PUS10Q3MIT2 529 aaKnown RBP11.11□□□□□ -0.63
CTSB-227ENST00000533110 PTCRAQ6ISU1 281 aaPredicted RBP11.11□□□□□ -0.63
CTSB-227ENST00000533110 SDR42E1Q8WUS8 393 aa11.11□□□□□ -0.63
CTSB-227ENST00000533110 ALDH8A1Q9H2A2 487 aaPredicted RBP11.11□□□□□ -0.63
CTSB-227ENST00000533110 KANSL2Q9H9L4 492 aa11.11□□□□□ -0.63
CTSB-227ENST00000533110 DCP1AQ9NPI6 582 aaPredicted RBP11.11□□□□□ -0.63
CTSB-227ENST00000533110 TLR7Q9NYK1 1049 aaKnown RBP11.11□□□□□ -0.63
CTSB-227ENST00000533110 RIPK3Q9Y572 518 aa11.11□□□□□ -0.63
CTSB-227ENST00000533110 COL11A1P12107 1806 aaPredicted RBP11.11□□□□□ -0.63
CTSB-227ENST00000533110 TRANK1O15050 2925 aa11.11□□□□□ -0.63
CTSB-227ENST00000533110 GRIN2DO15399 1336 aa11.1□□□□□ -0.63
CTSB-227ENST00000533110 TNKSO95271 1327 aa11.1□□□□□ -0.63
CTSB-227ENST00000533110 PARP14Q460N5 1801 aa11.1□□□□□ -0.63
CTSB-227ENST00000533110 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.1□□□□□ -0.63
CTSB-227ENST00000533110 DYNC1LI2O43237 492 aaPredicted RBP11.1□□□□□ -0.63
CTSB-227ENST00000533110 ST18O60284 1047 aa11.1□□□□□ -0.63
CTSB-227ENST00000533110 RETREG2Q8NC44 543 aa11.1□□□□□ -0.63
CTSB-227ENST00000533110 MFSD14AQ96MC6 490 aa11.1□□□□□ -0.63
CTSB-227ENST00000533110 ZBED2Q9BTP6 218 aa11.1□□□□□ -0.63
CTSB-227ENST00000533110 CCDC8Q9H0W5 538 aaPredicted RBP11.1□□□□□ -0.63
CTSB-227ENST00000533110 ANTXR1Q9H6X2 564 aa11.1□□□□□ -0.63
CTSB-227ENST00000533110 TRMT13Q9NUP7 481 aaKnown RBP11.1□□□□□ -0.63
CTSB-227ENST00000533110 MTUS1Q9ULD2 1270 aa11.1□□□□□ -0.63
CTSB-227ENST00000533110 COL4A4P53420 1690 aaPredicted RBP11.1□□□□□ -0.63
CTSB-227ENST00000533110 ASTN1O14525 1302 aa11.09□□□□□ -0.63
CTSB-227ENST00000533110 ASB14A6NK59 587 aa11.09□□□□□ -0.63
CTSB-227ENST00000533110 ATP2A1O14983 1001 aa11.09□□□□□ -0.63
CTSB-227ENST00000533110 ANP32CO43423 234 aa11.09□□□□□ -0.63
CTSB-227ENST00000533110 SURF6O75683 361 aaKnown RBP11.09□□□□□ -0.63
CTSB-227ENST00000533110 BAIAP3O94812 1187 aa11.09□□□□□ -0.63
CTSB-227ENST00000533110 SLFN5Q08AF3 891 aa11.09□□□□□ -0.63
CTSB-227ENST00000533110 TTF1Q15361 905 aaPredicted RBP11.09□□□□□ -0.63
CTSB-227ENST00000533110 FAM47CQ5HY64 1035 aa11.09□□□□□ -0.63
CTSB-227ENST00000533110 SLC9C2Q5TAH2 1124 aa11.09□□□□□ -0.63
CTSB-227ENST00000533110 PRPF38AQ8NAV1 312 aaKnown RBP11.09□□□□□ -0.63
CTSB-227ENST00000533110 CHST13Q8NET6 341 aa11.09□□□□□ -0.63
CTSB-227ENST00000533110 VWCEQ96DN2 955 aa11.09□□□□□ -0.63
CTSB-227ENST00000533110 DDRGK1Q96HY6 314 aa11.09□□□□□ -0.63
CTSB-227ENST00000533110 FGD4Q96M96 766 aa11.09□□□□□ -0.63
CTSB-227ENST00000533110 CRBNQ96SW2 442 aa11.09□□□□□ -0.63
CTSB-227ENST00000533110 NUP88Q99567 741 aaPredicted RBP11.09□□□□□ -0.63
CTSB-227ENST00000533110 KATNBL1Q9H079 304 aa11.09□□□□□ -0.63
CTSB-227ENST00000533110 RAVER2Q9HCJ3 691 aaKnown RBP11.09□□□□□ -0.63
CTSB-227ENST00000533110 GNEQ9Y223 722 aaKnown RBP11.09□□□□□ -0.63
CTSB-227ENST00000533110 FAM50BQ9Y247 325 aa11.09□□□□□ -0.63
CTSB-227ENST00000533110 MYO5AQ9Y4I1 1855 aaKnown RBP11.08□□□□□ -0.64
CTSB-227ENST00000533110 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.08□□□□□ -0.64
CTSB-227ENST00000533110 CT47B1P0C2W7 299 aaPredicted RBP11.08□□□□□ -0.64
CTSB-227ENST00000533110 PDE6AP16499 860 aa11.08□□□□□ -0.64
CTSB-227ENST00000533110 SMPD1P17405 629 aa11.08□□□□□ -0.64
CTSB-227ENST00000533110 CDK8P49336 464 aa11.08□□□□□ -0.64
CTSB-227ENST00000533110 FOXK2Q01167 660 aa11.08□□□□□ -0.64
CTSB-227ENST00000533110 HFE2Q6ZVN8 426 aa11.08□□□□□ -0.64
CTSB-227ENST00000533110 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.08□□□□□ -0.64
CTSB-227ENST00000533110 SPRED2Q7Z698 418 aa11.08□□□□□ -0.64
CTSB-227ENST00000533110 LCORLQ8N3X6 602 aa11.08□□□□□ -0.64
CTSB-227ENST00000533110 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms