RNA–Protein interactions for RNA: ENST00000533064.1

TRIM3-212, Transcript of tripartite motif containing 3, humanhuman

TSL 1 (best)

Gene TRIM3, Length 1,654 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-212ENST00000533064 HOXC10Q9NYD6 342 aa16.39■□□□□ 0.21
TRIM3-212ENST00000533064 MYPNQ86TC9 1320 aa16.39■□□□□ 0.21
TRIM3-212ENST00000533064 CCL15-CCL14A0A0B4J2E2 113 aa16.38■□□□□ 0.21
TRIM3-212ENST00000533064 ZBED4O75132 1171 aa16.38■□□□□ 0.21
TRIM3-212ENST00000533064 BRD1O95696 1058 aa16.38■□□□□ 0.21
TRIM3-212ENST00000533064 HOXA7P31268 230 aaPredicted RBP16.38■□□□□ 0.21
TRIM3-212ENST00000533064 GUCY1B3Q02153 619 aa16.38■□□□□ 0.21
TRIM3-212ENST00000533064 SAFBQ15424 915 aaKnown RBP eCLIP16.38■□□□□ 0.21
TRIM3-212ENST00000533064 CCL15Q16663 113 aa16.38■□□□□ 0.21
TRIM3-212ENST00000533064 TREML2Q5T2D2 321 aa16.38■□□□□ 0.21
TRIM3-212ENST00000533064 FBXO11Q86XK2 927 aa16.38■□□□□ 0.21
TRIM3-212ENST00000533064 RASAL3Q86YV0 1011 aa16.38■□□□□ 0.21
TRIM3-212ENST00000533064 CCDC102AQ96A19 550 aa16.38■□□□□ 0.21
TRIM3-212ENST00000533064 RANBP17Q9H2T7 1088 aaKnown RBP16.38■□□□□ 0.21
TRIM3-212ENST00000533064 BRMS1Q9HCU9 246 aa16.38■□□□□ 0.21
TRIM3-212ENST00000533064 BARHL2Q9NY43 387 aa16.38■□□□□ 0.21
TRIM3-212ENST00000533064 VPS54Q9P1Q0 977 aa16.38■□□□□ 0.21
TRIM3-212ENST00000533064 ZDHHC9Q9Y397 364 aa16.38■□□□□ 0.21
TRIM3-212ENST00000533064 ZNFX1Q9P2E3 1918 aaKnown RBP16.38■□□□□ 0.21
TRIM3-212ENST00000533064 A0A0G2JMZ2 1700 aa16.38■□□□□ 0.21
TRIM3-212ENST00000533064 OSBPP22059 807 aa16.37■□□□□ 0.21
TRIM3-212ENST00000533064 DSG3P32926 999 aa16.37■□□□□ 0.21
TRIM3-212ENST00000533064 NAPAP54920 295 aa16.37■□□□□ 0.21
TRIM3-212ENST00000533064 GNL2Q13823 731 aaKnown RBP16.37■□□□□ 0.21
TRIM3-212ENST00000533064 KRT40Q6A162 431 aa16.37■□□□□ 0.21
TRIM3-212ENST00000533064 WWC2Q6AWC2 1192 aa16.37■□□□□ 0.21
TRIM3-212ENST00000533064 PAXIP1Q6ZW49 1069 aaPredicted RBP16.37■□□□□ 0.21
TRIM3-212ENST00000533064 AMNQ9BXJ7 453 aa16.37■□□□□ 0.21
TRIM3-212ENST00000533064 PNMA3Q9UL41 463 aa16.37■□□□□ 0.21
TRIM3-212ENST00000533064 PNMA2Q9UL42 364 aa16.37■□□□□ 0.21
TRIM3-212ENST00000533064 SLC10A3P09131 477 aa16.37■□□□□ 0.21
TRIM3-212ENST00000533064 ZSCAN22P10073 491 aaPredicted RBP16.37■□□□□ 0.21
TRIM3-212ENST00000533064 CALML3P27482 149 aa16.37■□□□□ 0.21
TRIM3-212ENST00000533064 APLP1P51693 650 aa16.37■□□□□ 0.21
TRIM3-212ENST00000533064 NLRP5P59047 1200 aa16.37■□□□□ 0.21
TRIM3-212ENST00000533064 MCTP1Q6DN14 999 aa16.37■□□□□ 0.21
TRIM3-212ENST00000533064 CCDC174Q6PII3 467 aa16.37■□□□□ 0.21
TRIM3-212ENST00000533064 MS4A4AQ96JQ5 239 aa16.37■□□□□ 0.21
TRIM3-212ENST00000533064 PCDHA1Q9Y5I3 950 aa16.37■□□□□ 0.21
TRIM3-212ENST00000533064 MYH7BA7E2Y1 1941 aa16.36■□□□□ 0.21
TRIM3-212ENST00000533064 MANSC4A6NHS7 340 aaPredicted RBP16.36■□□□□ 0.21
TRIM3-212ENST00000533064 DDX11L8A8MPP1 907 aa16.36■□□□□ 0.21
TRIM3-212ENST00000533064 STXBP3O00186 592 aa16.36■□□□□ 0.21
TRIM3-212ENST00000533064 SNAP25P60880 206 aa16.36■□□□□ 0.21
TRIM3-212ENST00000533064 OTUD7BQ6GQQ9 843 aa16.36■□□□□ 0.21
TRIM3-212ENST00000533064 PPP1R18Q6NYC8 613 aa16.36■□□□□ 0.21
TRIM3-212ENST00000533064 SLC38A10Q9HBR0 1119 aa16.36■□□□□ 0.21
TRIM3-212ENST00000533064 CREBZFQ9NS37 354 aa16.36■□□□□ 0.21
TRIM3-212ENST00000533064 MTMR6Q9Y217 621 aa16.36■□□□□ 0.21
TRIM3-212ENST00000533064 VWA5AO00534 786 aa16.35■□□□□ 0.21
TRIM3-212ENST00000533064 MMP1P03956 469 aa16.35■□□□□ 0.21
TRIM3-212ENST00000533064 MOGSQ13724 837 aa16.35■□□□□ 0.21
TRIM3-212ENST00000533064 USH1GQ495M9 461 aa16.35■□□□□ 0.21
TRIM3-212ENST00000533064 FOXD4L5Q5VV16 416 aaPredicted RBP16.35■□□□□ 0.21
TRIM3-212ENST00000533064 FOXD4L4Q8WXT5 416 aaPredicted RBP16.35■□□□□ 0.21
TRIM3-212ENST00000533064 COA7Q96BR5 231 aa16.35■□□□□ 0.21
TRIM3-212ENST00000533064 ATG4CQ96DT6 458 aa16.35■□□□□ 0.21
TRIM3-212ENST00000533064 PHF20Q9BVI0 1012 aa16.35■□□□□ 0.21
TRIM3-212ENST00000533064 C6orf50Q9HD87 102 aa16.35■□□□□ 0.21
TRIM3-212ENST00000533064 GJB4Q9NTQ9 266 aa16.35■□□□□ 0.21
TRIM3-212ENST00000533064 KCNJ14Q9UNX9 436 aa16.35■□□□□ 0.21
TRIM3-212ENST00000533064 SLC45A1Q9Y2W3 748 aa16.35■□□□□ 0.21
TRIM3-212ENST00000533064 SPDYE16A6NNV3 312 aaPredicted RBP16.34■□□□□ 0.21
TRIM3-212ENST00000533064 GNA11P29992 359 aa16.34■□□□□ 0.21
TRIM3-212ENST00000533064 GALNT17Q6IS24 598 aa16.34■□□□□ 0.21
TRIM3-212ENST00000533064 GPAT2Q6NUI2 795 aa16.34■□□□□ 0.21
TRIM3-212ENST00000533064 ANKRD23Q86SG2 305 aa16.34■□□□□ 0.21
TRIM3-212ENST00000533064 MB21D1Q8N884 522 aa16.34■□□□□ 0.21
TRIM3-212ENST00000533064 BRI3BPQ8WY22 251 aa16.34■□□□□ 0.21
TRIM3-212ENST00000533064 GLT8D2Q9H1C3 349 aa16.34■□□□□ 0.21
TRIM3-212ENST00000533064 ASCC2Q9H1I8 757 aaPredicted RBP16.34■□□□□ 0.21
TRIM3-212ENST00000533064 CCPG1Q9ULG6 757 aa16.34■□□□□ 0.21
TRIM3-212ENST00000533064 ATP6V1DQ9Y5K8 247 aa16.34■□□□□ 0.21
TRIM3-212ENST00000533064 PPP1R11O60927 126 aaPredicted RBP16.34■□□□□ 0.21
TRIM3-212ENST00000533064 BAG4O95429 457 aaKnown RBP16.34■□□□□ 0.21
TRIM3-212ENST00000533064 F13A1P00488 732 aa16.34■□□□□ 0.21
TRIM3-212ENST00000533064 ICAM1P05362 532 aa16.34■□□□□ 0.21
TRIM3-212ENST00000533064 KRT2P35908 639 aa16.34■□□□□ 0.21
TRIM3-212ENST00000533064 INHBEP58166 350 aa16.34■□□□□ 0.21
TRIM3-212ENST00000533064 CPXCR1Q8N123 301 aa16.34■□□□□ 0.21
TRIM3-212ENST00000533064 BICD2Q8TD16 824 aa16.34■□□□□ 0.21
TRIM3-212ENST00000533064 ZSCAN16Q9H4T2 348 aaPredicted RBP16.34■□□□□ 0.21
TRIM3-212ENST00000533064 ADAMTS5Q9UNA0 930 aa16.34■□□□□ 0.21
TRIM3-212ENST00000533064 ESYT2A0FGR8 921 aa16.33■□□□□ 0.2
TRIM3-212ENST00000533064 SMCO2A6NFE2 343 aa16.33■□□□□ 0.2
TRIM3-212ENST00000533064 BTBD19C9JJ37 291 aa16.33■□□□□ 0.2
TRIM3-212ENST00000533064 PDHXO00330 501 aa16.33■□□□□ 0.2
TRIM3-212ENST00000533064 PTMSP20962 102 aa16.33■□□□□ 0.2
TRIM3-212ENST00000533064 OAZ1P54368 228 aa16.33■□□□□ 0.2
TRIM3-212ENST00000533064 HERVK_113P62684 666 aa16.33■□□□□ 0.2
TRIM3-212ENST00000533064 SREBF2Q12772 1141 aa16.33■□□□□ 0.2
TRIM3-212ENST00000533064 GRM1Q13255 1194 aa16.33■□□□□ 0.2
TRIM3-212ENST00000533064 DEFB115Q30KQ5 88 aa16.33■□□□□ 0.2
TRIM3-212ENST00000533064 FERMT3Q86UX7 667 aa16.33■□□□□ 0.2
TRIM3-212ENST00000533064 DIS3L2Q8IYB7 885 aaKnown RBP16.33■□□□□ 0.2
TRIM3-212ENST00000533064 GTF3C2Q8WUA4 911 aaPredicted RBP16.33■□□□□ 0.2
TRIM3-212ENST00000533064 P2RX7Q99572 595 aaKnown RBP16.33■□□□□ 0.2
TRIM3-212ENST00000533064 ZMYND12Q9H0C1 365 aa16.33■□□□□ 0.2
TRIM3-212ENST00000533064 MRPL11Q9Y3B7 192 aaKnown RBP16.33■□□□□ 0.2
TRIM3-212ENST00000533064 ABCB11O95342 1321 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms