RNA–Protein interactions for RNA: ENST00000533063.5

GSDMD-212, Transcript of gasdermin D, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GSDMD, Length 1,800 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-212ENST00000533063 RCOR1Q9UKL0 485 aa23.32■■□□□ 1.32
GSDMD-212ENST00000533063 CSADQ9Y600 493 aa23.32■■□□□ 1.32
GSDMD-212ENST00000533063 NASPP49321 788 aaPredicted RBP23.31■■□□□ 1.32
GSDMD-212ENST00000533063 ANKRD13AQ8IZ07 590 aa23.31■■□□□ 1.32
GSDMD-212ENST00000533063 GPT2Q8TD30 523 aa23.31■■□□□ 1.32
GSDMD-212ENST00000533063 CHURC1Q8WUH1 139 aa23.31■■□□□ 1.32
GSDMD-212ENST00000533063 BRMS1Q9HCU9 246 aa23.31■■□□□ 1.32
GSDMD-212ENST00000533063 TRAK2O60296 914 aa23.31■■□□□ 1.32
GSDMD-212ENST00000533063 FAM160B2Q86V87 743 aa23.31■■□□□ 1.32
GSDMD-212ENST00000533063 CCDC12Q8WUD4 166 aaPredicted RBP23.31■■□□□ 1.32
GSDMD-212ENST00000533063 KIFC2Q96AC6 838 aa23.31■■□□□ 1.32
GSDMD-212ENST00000533063 RANBP17Q9H2T7 1088 aaKnown RBP23.31■■□□□ 1.32
GSDMD-212ENST00000533063 ELP3Q9H9T3 547 aa23.31■■□□□ 1.32
GSDMD-212ENST00000533063 PCDHA6Q9UN73 950 aa23.31■■□□□ 1.32
GSDMD-212ENST00000533063 PCDHA8Q9Y5H6 950 aa23.31■■□□□ 1.32
GSDMD-212ENST00000533063 C19orf81C9J6K1 198 aa23.3■■□□□ 1.32
GSDMD-212ENST00000533063 WNT7AO00755 349 aa23.3■■□□□ 1.32
GSDMD-212ENST00000533063 TAL1P17542 331 aaPredicted RBP23.3■■□□□ 1.32
GSDMD-212ENST00000533063 LDLRAD1Q5T700 205 aa23.3■■□□□ 1.32
GSDMD-212ENST00000533063 PPP1R18Q6NYC8 613 aa23.3■■□□□ 1.32
GSDMD-212ENST00000533063 LINC00301Q8NCQ3 95 aa23.3■■□□□ 1.32
GSDMD-212ENST00000533063 LOC285556D6RIA3 1793 aa23.3■■□□□ 1.32
GSDMD-212ENST00000533063 PTMSP20962 102 aa23.29■■□□□ 1.32
GSDMD-212ENST00000533063 TTLL12Q14166 644 aaPredicted RBP23.29■■□□□ 1.32
GSDMD-212ENST00000533063 SH3D19Q5HYK7 790 aa23.29■■□□□ 1.32
GSDMD-212ENST00000533063 ANO1Q5XXA6 986 aa23.29■■□□□ 1.32
GSDMD-212ENST00000533063 RPAP3Q9H6T3 665 aaPredicted RBP23.29■■□□□ 1.32
GSDMD-212ENST00000533063 PCDHA1Q9Y5I3 950 aa23.29■■□□□ 1.32
GSDMD-212ENST00000533063 PGBD1Q96JS3 809 aa23.29■■□□□ 1.32
GSDMD-212ENST00000533063 C6orf50Q9HD87 102 aa23.29■■□□□ 1.32
GSDMD-212ENST00000533063 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.29■■□□□ 1.32
GSDMD-212ENST00000533063 COL11A1P12107 1806 aaPredicted RBP23.28■■□□□ 1.32
GSDMD-212ENST00000533063 GNA11P29992 359 aa23.28■■□□□ 1.32
GSDMD-212ENST00000533063 PTPAQ15257 358 aa23.28■■□□□ 1.32
GSDMD-212ENST00000533063 SF3A1Q15459 793 aaKnown RBP23.28■■□□□ 1.32
GSDMD-212ENST00000533063 RILPL1Q5EBL4 403 aa23.28■■□□□ 1.32
GSDMD-212ENST00000533063 PIK3AP1Q6ZUJ8 805 aa23.28■■□□□ 1.32
GSDMD-212ENST00000533063 ARMC9Q7Z3E5 817 aa23.28■■□□□ 1.32
GSDMD-212ENST00000533063 SLF1Q9BQI6 1058 aa23.28■■□□□ 1.32
GSDMD-212ENST00000533063 AMNQ9BXJ7 453 aa23.28■■□□□ 1.32
GSDMD-212ENST00000533063 SPDYE5A6NIY4 337 aa23.27■■□□□ 1.32
GSDMD-212ENST00000533063 IRF6O14896 467 aa23.27■■□□□ 1.32
GSDMD-212ENST00000533063 CSPP1Q1MSJ5 1256 aa23.27■■□□□ 1.32
GSDMD-212ENST00000533063 FBXO11Q86XK2 927 aa23.27■■□□□ 1.32
GSDMD-212ENST00000533063 ERO1BQ86YB8 467 aa23.27■■□□□ 1.32
GSDMD-212ENST00000533063 TANGO6Q9C0B7 1094 aa23.27■■□□□ 1.32
GSDMD-212ENST00000533063 RIC8AQ9NPQ8 531 aa23.27■■□□□ 1.32
GSDMD-212ENST00000533063 PCDHB6Q9Y5E3 794 aa23.27■■□□□ 1.32
GSDMD-212ENST00000533063 OPLAHO14841 1288 aa23.26■■□□□ 1.31
GSDMD-212ENST00000533063 YEATS4O95619 227 aa23.26■■□□□ 1.31
GSDMD-212ENST00000533063 PPATQ06203 517 aa23.26■■□□□ 1.31
GSDMD-212ENST00000533063 PRPF38AQ8NAV1 312 aaKnown RBP23.26■■□□□ 1.31
GSDMD-212ENST00000533063 RBM46Q8TBY0 533 aaKnown RBP23.26■■□□□ 1.31
GSDMD-212ENST00000533063 ZNF408Q9H9D4 720 aa23.26■■□□□ 1.31
GSDMD-212ENST00000533063 ZNF536O15090 1300 aa23.26■■□□□ 1.31
GSDMD-212ENST00000533063 CLK2P49760 499 aaKnown RBP23.26■■□□□ 1.31
GSDMD-212ENST00000533063 ADCY7P51828 1080 aa23.26■■□□□ 1.31
GSDMD-212ENST00000533063 UBE2HP62256 183 aa23.26■■□□□ 1.31
GSDMD-212ENST00000533063 USH1GQ495M9 461 aa23.26■■□□□ 1.31
GSDMD-212ENST00000533063 OTUD5Q96G74 571 aa23.26■■□□□ 1.31
GSDMD-212ENST00000533063 ANP32EQ9BTT0 268 aa23.26■■□□□ 1.31
GSDMD-212ENST00000533063 PPP1R9AQ9ULJ8 1098 aa23.26■■□□□ 1.31
GSDMD-212ENST00000533063 DDX49Q9Y6V7 483 aaKnown RBP23.26■■□□□ 1.31
GSDMD-212ENST00000533063 FLOT1O75955 427 aa23.25■■□□□ 1.31
GSDMD-212ENST00000533063 ITGBL1O95965 494 aaPredicted RBP23.25■■□□□ 1.31
GSDMD-212ENST00000533063 SLC39A14Q15043 492 aa23.25■■□□□ 1.31
GSDMD-212ENST00000533063 KLHL40Q2TBA0 621 aa23.25■■□□□ 1.31
GSDMD-212ENST00000533063 SAMD1Q6SPF0 538 aaPredicted RBP23.25■■□□□ 1.31
GSDMD-212ENST00000533063 REXO1Q8N1G1 1221 aaKnown RBP23.25■■□□□ 1.31
GSDMD-212ENST00000533063 TMEM260Q9NX78 707 aa23.25■■□□□ 1.31
GSDMD-212ENST00000533063 TRPM7Q96QT4 1865 aa23.25■■□□□ 1.31
GSDMD-212ENST00000533063 CCDC174Q6PII3 467 aa23.24■■□□□ 1.31
GSDMD-212ENST00000533063 WNK4Q96J92 1243 aa23.24■■□□□ 1.31
GSDMD-212ENST00000533063 BIN2Q9UBW5 565 aaPredicted RBP23.24■■□□□ 1.31
GSDMD-212ENST00000533063 MYH7BA7E2Y1 1941 aa23.24■■□□□ 1.31
GSDMD-212ENST00000533063 GJA5P36382 358 aa23.24■■□□□ 1.31
GSDMD-212ENST00000533063 UBE2SQ16763 222 aa23.24■■□□□ 1.31
GSDMD-212ENST00000533063 SKOR2Q2VWA4 1001 aaPredicted RBP23.24■■□□□ 1.31
GSDMD-212ENST00000533063 OPTNQ96CV9 577 aa23.24■■□□□ 1.31
GSDMD-212ENST00000533063 PSTPIP2Q9H939 334 aa23.24■■□□□ 1.31
GSDMD-212ENST00000533063 SLC38A10Q9HBR0 1119 aa23.24■■□□□ 1.31
GSDMD-212ENST00000533063 KCNH4Q9UQ05 1017 aa23.24■■□□□ 1.31
GSDMD-212ENST00000533063 A0A0G2JLL6 359 aaPredicted RBP23.23■■□□□ 1.31
GSDMD-212ENST00000533063 SPTLC2O15270 562 aa23.23■■□□□ 1.31
GSDMD-212ENST00000533063 ATP2B1P20020 1258 aa23.23■■□□□ 1.31
GSDMD-212ENST00000533063 STK38Q15208 465 aa23.23■■□□□ 1.31
GSDMD-212ENST00000533063 TREML2Q5T2D2 321 aa23.23■■□□□ 1.31
GSDMD-212ENST00000533063 JAKMIP3Q5VZ66 844 aa23.23■■□□□ 1.31
GSDMD-212ENST00000533063 CATSPERGQ6ZRH7 1159 aa23.23■■□□□ 1.31
GSDMD-212ENST00000533063 PRRT2Q7Z6L0 340 aaPredicted RBP23.23■■□□□ 1.31
GSDMD-212ENST00000533063 BICD2Q8TD16 824 aa23.23■■□□□ 1.31
GSDMD-212ENST00000533063 CUL5Q93034 780 aa23.23■■□□□ 1.31
GSDMD-212ENST00000533063 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.23■■□□□ 1.31
GSDMD-212ENST00000533063 TMOD4Q9NZQ9 345 aa23.23■■□□□ 1.31
GSDMD-212ENST00000533063 PCDHA7Q9UN72 937 aa23.23■■□□□ 1.31
GSDMD-212ENST00000533063 MEIS2O14770 477 aa23.22■■□□□ 1.31
GSDMD-212ENST00000533063 PPIL2Q13356 520 aa23.22■■□□□ 1.31
GSDMD-212ENST00000533063 TPRNQ4KMQ1 711 aa23.22■■□□□ 1.31
GSDMD-212ENST00000533063 KCNG4Q8TDN1 519 aa23.22■■□□□ 1.31
GSDMD-212ENST00000533063 P2RX7Q99572 595 aaKnown RBP23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms