RNA–Protein interactions for RNA: ENST00000532997.5

BDNF-216, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-216ENST00000532997 FAM217BQ9NTX9 383 aaPredicted RBP10.47□□□□□ -0.73
BDNF-216ENST00000532997 ARPP21Q9UBL0 812 aaPredicted RBP10.47□□□□□ -0.73
BDNF-216ENST00000532997 TTC26A0AVF1 554 aa10.47□□□□□ -0.73
BDNF-216ENST00000532997 BAG3O95817 575 aa10.47□□□□□ -0.73
BDNF-216ENST00000532997 LDHCP07864 332 aa10.47□□□□□ -0.73
BDNF-216ENST00000532997 TSPY3P0CV98 308 aa10.47□□□□□ -0.73
BDNF-216ENST00000532997 TSPY8P0CW00 308 aa10.47□□□□□ -0.73
BDNF-216ENST00000532997 KCNB1Q14721 858 aa10.47□□□□□ -0.73
BDNF-216ENST00000532997 ICE2Q659A1 982 aa10.47□□□□□ -0.73
BDNF-216ENST00000532997 CNOT6LQ96LI5 555 aaKnown RBP10.47□□□□□ -0.73
BDNF-216ENST00000532997 BRIP1Q9BX63 1249 aa10.47□□□□□ -0.73
BDNF-216ENST00000532997 NHEJ1Q9H9Q4 299 aaPredicted RBP10.47□□□□□ -0.73
BDNF-216ENST00000532997 NIP7Q9Y221 180 aaKnown RBP eCLIP10.47□□□□□ -0.73
BDNF-216ENST00000532997 B4DLN1 442 aa10.46□□□□□ -0.73
BDNF-216ENST00000532997 IL6STP40189 918 aaPredicted RBP10.46□□□□□ -0.73
BDNF-216ENST00000532997 GDAP1L1Q96MZ0 367 aa10.46□□□□□ -0.73
BDNF-216ENST00000532997 PLIN2Q99541 437 aa10.46□□□□□ -0.73
BDNF-216ENST00000532997 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.46□□□□□ -0.73
BDNF-216ENST00000532997 SOS2Q07890 1332 aaPredicted RBP10.46□□□□□ -0.73
BDNF-216ENST00000532997 SSBP05455 408 aaKnown RBP eCLIP10.46□□□□□ -0.73
BDNF-216ENST00000532997 PRCPP42785 496 aa10.46□□□□□ -0.73
BDNF-216ENST00000532997 SLC9C1Q4G0N8 1177 aa10.46□□□□□ -0.73
BDNF-216ENST00000532997 TADA2BQ86TJ2 420 aa10.46□□□□□ -0.73
BDNF-216ENST00000532997 C2CD5Q86YS7 1000 aa10.46□□□□□ -0.73
BDNF-216ENST00000532997 GIMAP7Q8NHV1 300 aa10.46□□□□□ -0.73
BDNF-216ENST00000532997 DDX17Q92841 729 aaKnown RBP10.46□□□□□ -0.73
BDNF-216ENST00000532997 PCDHA4Q9UN74 947 aa10.46□□□□□ -0.73
BDNF-216ENST00000532997 USP17L12C9JPN9 530 aa10.46□□□□□ -0.74
BDNF-216ENST00000532997 USP17L21D6R901 530 aa10.46□□□□□ -0.74
BDNF-216ENST00000532997 RPS6KA5O75582 802 aa10.46□□□□□ -0.74
BDNF-216ENST00000532997 CCT5P48643 541 aa10.46□□□□□ -0.74
BDNF-216ENST00000532997 ENAHQ8N8S7 591 aaPredicted RBP10.46□□□□□ -0.74
BDNF-216ENST00000532997 SH3GLB2Q9NR46 395 aa10.46□□□□□ -0.74
BDNF-216ENST00000532997 MCM9Q9NXL9 1143 aa10.46□□□□□ -0.74
BDNF-216ENST00000532997 GDAQ9Y2T3 454 aa10.46□□□□□ -0.74
BDNF-216ENST00000532997 ZEB2O60315 1214 aa10.45□□□□□ -0.74
BDNF-216ENST00000532997 COBLO75128 1261 aa10.45□□□□□ -0.74
BDNF-216ENST00000532997 PLEKHA8P1O95397 391 aa10.45□□□□□ -0.74
BDNF-216ENST00000532997 CD44P16070 742 aaKnown RBP10.45□□□□□ -0.74
BDNF-216ENST00000532997 ERVK-24P63145 666 aa10.45□□□□□ -0.74
BDNF-216ENST00000532997 GSTO1P78417 241 aa10.45□□□□□ -0.74
BDNF-216ENST00000532997 NONOQ15233 471 aaKnown RBP eCLIP10.45□□□□□ -0.74
BDNF-216ENST00000532997 TYW1BQ6NUM6 668 aa10.45□□□□□ -0.74
BDNF-216ENST00000532997 TRAPPC11Q7Z392 1133 aa10.45□□□□□ -0.74
BDNF-216ENST00000532997 NOA1Q8NC60 698 aaKnown RBP10.45□□□□□ -0.74
BDNF-216ENST00000532997 SPATA20Q8TB22 786 aa10.45□□□□□ -0.74
BDNF-216ENST00000532997 ATRIPQ8WXE1 791 aa10.45□□□□□ -0.74
BDNF-216ENST00000532997 STX8Q9UNK0 236 aa10.45□□□□□ -0.74
BDNF-216ENST00000532997 SPATA31A3Q5VYP0 1347 aa10.45□□□□□ -0.74
BDNF-216ENST00000532997 LAMA4Q16363 1823 aa10.45□□□□□ -0.74
BDNF-216ENST00000532997 DNA2P51530 1060 aa10.45□□□□□ -0.74
BDNF-216ENST00000532997 KRT79Q5XKE5 535 aa10.45□□□□□ -0.74
BDNF-216ENST00000532997 ARFGEF2Q9Y6D5 1785 aa10.45□□□□□ -0.74
BDNF-216ENST00000532997 TRIM66O15016 1216 aa10.45□□□□□ -0.74
BDNF-216ENST00000532997 NKX1-1Q15270 411 aaPredicted RBP10.45□□□□□ -0.74
BDNF-216ENST00000532997 VWA3BQ502W6 1294 aa10.45□□□□□ -0.74
BDNF-216ENST00000532997 GLE1Q53GS7 698 aaKnown RBP10.45□□□□□ -0.74
BDNF-216ENST00000532997 SH3RF1Q7Z6J0 888 aa10.45□□□□□ -0.74
BDNF-216ENST00000532997 IFT81Q8WYA0 676 aa10.45□□□□□ -0.74
BDNF-216ENST00000532997 RRP36Q96EU6 259 aaKnown RBP10.45□□□□□ -0.74
BDNF-216ENST00000532997 CEP89Q96ST8 783 aa10.45□□□□□ -0.74
BDNF-216ENST00000532997 NBPF3Q9H094 633 aa10.45□□□□□ -0.74
BDNF-216ENST00000532997 ATP8A2Q9NTI2 1148 aa10.45□□□□□ -0.74
BDNF-216ENST00000532997 ASAP1Q9ULH1 1129 aa10.45□□□□□ -0.74
BDNF-216ENST00000532997 HPCAL4Q9UM19 191 aa10.45□□□□□ -0.74
BDNF-216ENST00000532997 ATP1A1P05023 1023 aaKnown RBP10.44□□□□□ -0.74
BDNF-216ENST00000532997 OR52Z1P0C646 297 aa10.44□□□□□ -0.74
BDNF-216ENST00000532997 UBE4AQ14139 1066 aa10.44□□□□□ -0.74
BDNF-216ENST00000532997 PFKFB3Q16875 520 aaPredicted RBP10.44□□□□□ -0.74
BDNF-216ENST00000532997 LETM2Q2VYF4 491 aa10.44□□□□□ -0.74
BDNF-216ENST00000532997 ADSSL1Q8N142 457 aa10.44□□□□□ -0.74
BDNF-216ENST00000532997 LRRC45Q96CN5 670 aa10.44□□□□□ -0.74
BDNF-216ENST00000532997 CHP1Q99653 195 aa10.44□□□□□ -0.74
BDNF-216ENST00000532997 UBXN6Q9BZV1 441 aa10.44□□□□□ -0.74
BDNF-216ENST00000532997 PHRF1Q9P1Y6 1649 aaKnown RBP10.44□□□□□ -0.74
BDNF-216ENST00000532997 SCN11AQ9UI33 1791 aa10.44□□□□□ -0.74
BDNF-216ENST00000532997 FOXP2O15409 715 aa10.44□□□□□ -0.74
BDNF-216ENST00000532997 CDC25AP30304 524 aa10.44□□□□□ -0.74
BDNF-216ENST00000532997 GGCXP38435 758 aa10.44□□□□□ -0.74
BDNF-216ENST00000532997 CORO7P57737 925 aa10.44□□□□□ -0.74
BDNF-216ENST00000532997 CHRNDQ07001 517 aa10.44□□□□□ -0.74
BDNF-216ENST00000532997 C2orf54Q08AI8 447 aa10.44□□□□□ -0.74
BDNF-216ENST00000532997 HLFQ16534 295 aa10.44□□□□□ -0.74
BDNF-216ENST00000532997 LMBR1Q8WVP7 490 aa10.44□□□□□ -0.74
BDNF-216ENST00000532997 TCRBV5S4A2TA0A5A2 114 aa10.44□□□□□ -0.74
BDNF-216ENST00000532997 LRRC10BA6NIK2 292 aa10.44□□□□□ -0.74
BDNF-216ENST00000532997 MMS22LQ6ZRQ5 1243 aa10.44□□□□□ -0.74
BDNF-216ENST00000532997 CCDC121Q6ZUS5 278 aa10.44□□□□□ -0.74
BDNF-216ENST00000532997 RRAGAQ7L523 313 aa10.44□□□□□ -0.74
BDNF-216ENST00000532997 MMS19Q96T76 1030 aa10.44□□□□□ -0.74
BDNF-216ENST00000532997 ANAPC4Q9UJX5 808 aa10.44□□□□□ -0.74
BDNF-216ENST00000532997 TMEM94Q12767 1356 aa10.43□□□□□ -0.74
BDNF-216ENST00000532997 FAM205CA6NFA0 338 aa10.43□□□□□ -0.74
BDNF-216ENST00000532997 N4BP1O75113 896 aaKnown RBP10.43□□□□□ -0.74
BDNF-216ENST00000532997 PBX1P40424 430 aa10.43□□□□□ -0.74
BDNF-216ENST00000532997 NOP2P46087 812 aaKnown RBP10.43□□□□□ -0.74
BDNF-216ENST00000532997 IFFO1Q0D2I5 559 aa10.43□□□□□ -0.74
BDNF-216ENST00000532997 MAN2A1Q16706 1144 aa10.43□□□□□ -0.74
BDNF-216ENST00000532997 PAPD7Q5XG87 772 aaKnown RBP10.43□□□□□ -0.74
BDNF-216ENST00000532997 CCNI2Q6ZMN8 369 aaPredicted RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms