RNA–Protein interactions for RNA: ENST00000532932.5

LTBP3-221, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2 BASIC

Gene LTBP3, Length 3,327 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-221ENST00000532932 PCDH11XQ9BZA7 1347 aa16.53■□□□□ 0.24
LTBP3-221ENST00000532932 PCDH11YQ9BZA8 1340 aa16.53■□□□□ 0.24
LTBP3-221ENST00000532932 GNAT2P19087 354 aa16.53■□□□□ 0.24
LTBP3-221ENST00000532932 ERCC3P19447 782 aa16.53■□□□□ 0.24
LTBP3-221ENST00000532932 NAP1L1P55209 391 aaKnown RBP16.53■□□□□ 0.24
LTBP3-221ENST00000532932 TRIM28Q13263 835 aaKnown RBP16.53■□□□□ 0.24
LTBP3-221ENST00000532932 SH2D3CQ8N5H7 860 aa16.53■□□□□ 0.24
LTBP3-221ENST00000532932 CSGALNACT2Q8N6G5 542 aa16.53■□□□□ 0.24
LTBP3-221ENST00000532932 TUBGCP2Q9BSJ2 902 aa16.53■□□□□ 0.24
LTBP3-221ENST00000532932 ASAP1Q9ULH1 1129 aa16.53■□□□□ 0.24
LTBP3-221ENST00000532932 MYO5AQ9Y4I1 1855 aaKnown RBP16.53■□□□□ 0.24
LTBP3-221ENST00000532932 ERVV-2B6SEH9 535 aa16.53■□□□□ 0.24
LTBP3-221ENST00000532932 NDUFAB1O14561 156 aa16.53■□□□□ 0.24
LTBP3-221ENST00000532932 PSMA7O14818 248 aa16.53■□□□□ 0.24
LTBP3-221ENST00000532932 PLEKP08567 350 aaPredicted RBP16.53■□□□□ 0.24
LTBP3-221ENST00000532932 SLC4A8Q2Y0W8 1093 aa16.53■□□□□ 0.24
LTBP3-221ENST00000532932 TYW1BQ6NUM6 668 aa16.53■□□□□ 0.24
LTBP3-221ENST00000532932 GIGYF2Q6Y7W6 1299 aaKnown RBP16.53■□□□□ 0.24
LTBP3-221ENST00000532932 TMOD3Q9NYL9 352 aa16.53■□□□□ 0.24
LTBP3-221ENST00000532932 TJP1Q07157 1748 aa16.52■□□□□ 0.24
LTBP3-221ENST00000532932 MOCS3O95396 460 aa16.52■□□□□ 0.24
LTBP3-221ENST00000532932 SEC23AQ15436 765 aa16.52■□□□□ 0.24
LTBP3-221ENST00000532932 MCTP2Q6DN12 878 aa16.52■□□□□ 0.24
LTBP3-221ENST00000532932 EXOC1Q9NV70 894 aa16.52■□□□□ 0.24
LTBP3-221ENST00000532932 DNM2P50570 870 aa16.52■□□□□ 0.24
LTBP3-221ENST00000532932 NFRKBQ6P4R8 1299 aa16.52■□□□□ 0.24
LTBP3-221ENST00000532932 IQCA1Q86XH1 822 aa16.52■□□□□ 0.24
LTBP3-221ENST00000532932 ADSSL1Q8N142 457 aa16.52■□□□□ 0.24
LTBP3-221ENST00000532932 CAPN7Q9Y6W3 813 aa16.52■□□□□ 0.24
LTBP3-221ENST00000532932 HSF2BPO75031 334 aa16.52■□□□□ 0.23
LTBP3-221ENST00000532932 ZPR1O75312 459 aa16.52■□□□□ 0.23
LTBP3-221ENST00000532932 SPATA31A3Q5VYP0 1347 aa16.51■□□□□ 0.23
LTBP3-221ENST00000532932 EIF3HO15372 352 aaKnown RBP eCLIP16.51■□□□□ 0.233e-9■■□□□ 12.9
LTBP3-221ENST00000532932 NCK2O43639 380 aa16.51■□□□□ 0.23
LTBP3-221ENST00000532932 NMT2O60551 498 aa16.51■□□□□ 0.23
LTBP3-221ENST00000532932 TACC1O75410 805 aa16.51■□□□□ 0.23
LTBP3-221ENST00000532932 CCDC178Q5BJE1 867 aa16.51■□□□□ 0.23
LTBP3-221ENST00000532932 CAPN6Q9Y6Q1 641 aa16.51■□□□□ 0.23
LTBP3-221ENST00000532932 OPA1O60313 960 aa16.51■□□□□ 0.23
LTBP3-221ENST00000532932 AMOTL1Q8IY63 956 aa16.51■□□□□ 0.23
LTBP3-221ENST00000532932 TSEN2Q8NCE0 465 aaKnown RBP16.51■□□□□ 0.23
LTBP3-221ENST00000532932 AENQ8WTP8 325 aaKnown RBP16.51■□□□□ 0.23
LTBP3-221ENST00000532932 MYH7P12883 1935 aa16.51■□□□□ 0.23
LTBP3-221ENST00000532932 NUTM2BA6NNL0 878 aaPredicted RBP16.5■□□□□ 0.23
LTBP3-221ENST00000532932 NUTM2EB1AL46 878 aaPredicted RBP16.5■□□□□ 0.23
LTBP3-221ENST00000532932 USO1O60763 962 aaKnown RBP16.5■□□□□ 0.23
LTBP3-221ENST00000532932 KIAA0754O94854 1291 aa16.5■□□□□ 0.23
LTBP3-221ENST00000532932 IBSPP21815 317 aaPredicted RBP16.5■□□□□ 0.23
LTBP3-221ENST00000532932 EEF1GP26641 437 aaKnown RBP16.5■□□□□ 0.23
LTBP3-221ENST00000532932 UBA7P41226 1012 aa16.5■□□□□ 0.23
LTBP3-221ENST00000532932 FUT2Q10981 343 aa16.5■□□□□ 0.23
LTBP3-221ENST00000532932 MYCBPQ99417 103 aaPredicted RBP16.5■□□□□ 0.23
LTBP3-221ENST00000532932 NOC4LQ9BVI4 516 aaKnown RBP16.5■□□□□ 0.23
LTBP3-221ENST00000532932 KIF1AQ12756 1690 aa16.5■□□□□ 0.23
LTBP3-221ENST00000532932 PDE8AO60658 829 aa16.5■□□□□ 0.23
LTBP3-221ENST00000532932 SHOX2O60902 331 aaPredicted RBP16.5■□□□□ 0.23
LTBP3-221ENST00000532932 STARD3NLO95772 234 aa16.5■□□□□ 0.23
LTBP3-221ENST00000532932 HNRNPH1P31943 449 aaKnown RBP16.5■□□□□ 0.23
LTBP3-221ENST00000532932 FAM47AQ5JRC9 791 aa16.5■□□□□ 0.23
LTBP3-221ENST00000532932 ADGRA1Q86SQ6 560 aa16.5■□□□□ 0.23
LTBP3-221ENST00000532932 C2CD5Q86YS7 1000 aa16.5■□□□□ 0.23
LTBP3-221ENST00000532932 SRBD1Q8N5C6 995 aaKnown RBP16.5■□□□□ 0.23
LTBP3-221ENST00000532932 SPATA4Q8NEY3 305 aa16.5■□□□□ 0.23
LTBP3-221ENST00000532932 ZNF507Q8TCN5 953 aa16.5■□□□□ 0.23
LTBP3-221ENST00000532932 IFT81Q8WYA0 676 aa16.5■□□□□ 0.23
LTBP3-221ENST00000532932 GPKOWQ92917 476 aaPredicted RBP eCLIP16.5■□□□□ 0.23
LTBP3-221ENST00000532932 NCAPGQ9BPX3 1015 aa16.5■□□□□ 0.23
LTBP3-221ENST00000532932 IFIH1Q9BYX4 1025 aaKnown RBP16.5■□□□□ 0.23
LTBP3-221ENST00000532932 YY1AP1Q9H869 796 aa16.5■□□□□ 0.23
LTBP3-221ENST00000532932 AKAP11Q9UKA4 1901 aa16.5■□□□□ 0.23
LTBP3-221ENST00000532932 MAGEB6P1A0A0J9YX57 407 aa16.5■□□□□ 0.23
LTBP3-221ENST00000532932 A0A1W2PQC6 194 aa16.5■□□□□ 0.23
LTBP3-221ENST00000532932 CPP00450 1065 aa16.5■□□□□ 0.23
LTBP3-221ENST00000532932 DYNLL1P63167 89 aaKnown RBP16.5■□□□□ 0.23
LTBP3-221ENST00000532932 NPY5RQ15761 445 aa16.5■□□□□ 0.23
LTBP3-221ENST00000532932 FAM207AQ9NSI2 230 aaPredicted RBP16.5■□□□□ 0.23
LTBP3-221ENST00000532932 SNX12Q9UMY4 172 aa16.5■□□□□ 0.23
LTBP3-221ENST00000532932 LMTK3Q96Q04 1460 aa16.49■□□□□ 0.23
LTBP3-221ENST00000532932 GOLGA8KD6RF30 607 aa16.49■□□□□ 0.23
LTBP3-221ENST00000532932 AKR1B10O60218 316 aa16.49■□□□□ 0.23
LTBP3-221ENST00000532932 CREG2Q8IUH2 290 aa16.49■□□□□ 0.23
LTBP3-221ENST00000532932 CNOT6LQ96LI5 555 aaKnown RBP16.49■□□□□ 0.23
LTBP3-221ENST00000532932 PYM1Q9BRP8 204 aaKnown RBP16.49■□□□□ 0.23
LTBP3-221ENST00000532932 ZNF142P52746 1687 aaPredicted RBP16.49■□□□□ 0.23
LTBP3-221ENST00000532932 PDS5AQ29RF7 1337 aaKnown RBP16.49■□□□□ 0.23
LTBP3-221ENST00000532932 VAV2P52735 878 aa16.49■□□□□ 0.23
LTBP3-221ENST00000532932 ZBED6P86452 979 aa16.49■□□□□ 0.23
LTBP3-221ENST00000532932 RNF187Q5TA31 235 aaPredicted RBP16.49■□□□□ 0.23
LTBP3-221ENST00000532932 OTUD6BQ8N6M0 293 aa16.49■□□□□ 0.23
LTBP3-221ENST00000532932 TNFRSF25Q93038 417 aa16.49■□□□□ 0.23
LTBP3-221ENST00000532932 DDX60Q8IY21 1712 aaKnown RBP16.49■□□□□ 0.23
LTBP3-221ENST00000532932 CAMTA1Q9Y6Y1 1673 aa16.49■□□□□ 0.23
LTBP3-221ENST00000532932 ESYT3A0FGR9 886 aa16.48■□□□□ 0.23
LTBP3-221ENST00000532932 ANO9A1A5B4 782 aa16.48■□□□□ 0.23
LTBP3-221ENST00000532932 ADAMTS2O95450 1211 aa16.48■□□□□ 0.23
LTBP3-221ENST00000532932 SRGNP10124 158 aa16.48■□□□□ 0.23
LTBP3-221ENST00000532932 PAFAH1B1P43034 410 aa16.48■□□□□ 0.23
LTBP3-221ENST00000532932 RNASE9P60153 205 aaKnown RBP16.48■□□□□ 0.23
LTBP3-221ENST00000532932 TMTC3Q6ZXV5 915 aa16.48■□□□□ 0.23
LTBP3-221ENST00000532932 CENPHQ9H3R5 247 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms