RNA–Protein interactions for RNA: ENST00000532918.4

COLCA1-203, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,366 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-203ENST00000532918 CYP26C1Q6V0L0 522 aa11.83□□□□□ -0.52
COLCA1-203ENST00000532918 SRGAP1Q7Z6B7 1085 aa11.83□□□□□ -0.52
COLCA1-203ENST00000532918 SYNE4Q8N205 404 aa11.83□□□□□ -0.52
COLCA1-203ENST00000532918 MIPOL1Q8TD10 442 aa11.83□□□□□ -0.52
COLCA1-203ENST00000532918 RSRC1Q96IZ7 334 aaKnown RBP11.83□□□□□ -0.52
COLCA1-203ENST00000532918 DNAI1Q9UI46 699 aa11.83□□□□□ -0.52
COLCA1-203ENST00000532918 GIPC1O14908 333 aa11.83□□□□□ -0.52
COLCA1-203ENST00000532918 CCDC122Q5T0U0 273 aa11.83□□□□□ -0.52
COLCA1-203ENST00000532918 LRCH2Q5VUJ6 765 aa11.83□□□□□ -0.52
COLCA1-203ENST00000532918 ATP8B3O60423 1300 aa11.83□□□□□ -0.52
COLCA1-203ENST00000532918 SOS2Q07890 1332 aaPredicted RBP11.83□□□□□ -0.52
COLCA1-203ENST00000532918 GOLGA8HP0CJ92 632 aa11.82□□□□□ -0.52
COLCA1-203ENST00000532918 SUSD4Q5VX71 490 aa11.82□□□□□ -0.52
COLCA1-203ENST00000532918 NOSTRINQ8IVI9 506 aa11.82□□□□□ -0.52
COLCA1-203ENST00000532918 SPICE1Q8N0Z3 855 aa11.82□□□□□ -0.52
COLCA1-203ENST00000532918 IGSF22Q8N9C0 903 aa11.82□□□□□ -0.52
COLCA1-203ENST00000532918 ZNF577Q9BSK1 485 aa11.82□□□□□ -0.52
COLCA1-203ENST00000532918 SEPT9Q9UHD8 586 aaPredicted RBP11.82□□□□□ -0.52
COLCA1-203ENST00000532918 CRB1P82279 1406 aa11.82□□□□□ -0.52
COLCA1-203ENST00000532918 ABL1P00519 1130 aa11.82□□□□□ -0.52
COLCA1-203ENST00000532918 FGAP02671 866 aa11.82□□□□□ -0.52
COLCA1-203ENST00000532918 TMEM179Q6ZVK1 233 aa11.82□□□□□ -0.52
COLCA1-203ENST00000532918 TAOK1Q7L7X3 1001 aa11.82□□□□□ -0.52
COLCA1-203ENST00000532918 PUS3Q9BZE2 481 aaKnown RBP11.82□□□□□ -0.52
COLCA1-203ENST00000532918 METTL14Q9HCE5 456 aaKnown RBP11.82□□□□□ -0.52
COLCA1-203ENST00000532918 XRCC5P13010 732 aaKnown RBP11.82□□□□□ -0.52
COLCA1-203ENST00000532918 ATP5DP30049 168 aa11.82□□□□□ -0.52
COLCA1-203ENST00000532918 VAV2P52735 878 aa11.82□□□□□ -0.52
COLCA1-203ENST00000532918 EN1Q05925 392 aaPredicted RBP11.82□□□□□ -0.52
COLCA1-203ENST00000532918 RAD51AP2Q09MP3 1159 aa11.82□□□□□ -0.52
COLCA1-203ENST00000532918 CFAP157Q5JU67 520 aa11.82□□□□□ -0.52
COLCA1-203ENST00000532918 AFAP1L2Q8N4X5 818 aa11.82□□□□□ -0.52
COLCA1-203ENST00000532918 VPS16Q9H269 839 aa11.82□□□□□ -0.52
COLCA1-203ENST00000532918 ZSWIM4Q9H7M6 989 aa11.82□□□□□ -0.52
COLCA1-203ENST00000532918 TPCN1Q9ULQ1 816 aa11.82□□□□□ -0.52
COLCA1-203ENST00000532918 hCG_1642624A0A1W2PR95 340 aa11.82□□□□□ -0.52
COLCA1-203ENST00000532918 RIOK3O14730 519 aaKnown RBP11.82□□□□□ -0.52
COLCA1-203ENST00000532918 ACTN4O43707 911 aaKnown RBP11.82□□□□□ -0.52
COLCA1-203ENST00000532918 PPP1R9BQ96SB3 815 aa11.82□□□□□ -0.52
COLCA1-203ENST00000532918 CDK12Q9NYV4 1490 aaPredicted RBP11.82□□□□□ -0.52
COLCA1-203ENST00000532918 NOL3O60936 208 aaKnown RBP11.82□□□□□ -0.52
COLCA1-203ENST00000532918 CACTINQ8WUQ7 758 aaKnown RBP11.82□□□□□ -0.52
COLCA1-203ENST00000532918 GTF3C6Q969F1 213 aa11.82□□□□□ -0.52
COLCA1-203ENST00000532918 TECP42680 631 aa11.81□□□□□ -0.52
COLCA1-203ENST00000532918 MXRA7P84157 204 aa11.81□□□□□ -0.52
COLCA1-203ENST00000532918 NELFBQ8WX92 580 aa11.81□□□□□ -0.52
COLCA1-203ENST00000532918 SMC6Q96SB8 1091 aa11.81□□□□□ -0.52
COLCA1-203ENST00000532918 PFDN6O15212 129 aa11.81□□□□□ -0.52
COLCA1-203ENST00000532918 ECE2O60344 883 aa11.81□□□□□ -0.52
COLCA1-203ENST00000532918 ZNF202O95125 648 aa11.81□□□□□ -0.52
COLCA1-203ENST00000532918 PROSER3Q2NL68 480 aa11.81□□□□□ -0.52
COLCA1-203ENST00000532918 ARMCX5Q6P1M9 558 aa11.81□□□□□ -0.52
COLCA1-203ENST00000532918 PPP1R21Q6ZMI0 780 aa11.81□□□□□ -0.52
COLCA1-203ENST00000532918 SESTD1Q86VW0 696 aa11.81□□□□□ -0.52
COLCA1-203ENST00000532918 GIMAP8Q8ND71 665 aaPredicted RBP11.81□□□□□ -0.52
COLCA1-203ENST00000532918 RASSF4Q9H2L5 321 aa11.81□□□□□ -0.52
COLCA1-203ENST00000532918 SPATA31E1Q6ZUB1 1445 aa11.81□□□□□ -0.52
COLCA1-203ENST00000532918 GMNNO75496 209 aa11.81□□□□□ -0.52
COLCA1-203ENST00000532918 ADORA1P30542 326 aa11.81□□□□□ -0.52
COLCA1-203ENST00000532918 MKRN3Q13064 507 aaKnown RBP11.81□□□□□ -0.52
COLCA1-203ENST00000532918 ZMYM1Q5SVZ6 1142 aa11.81□□□□□ -0.52
COLCA1-203ENST00000532918 SFMBT2Q5VUG0 894 aa11.81□□□□□ -0.52
COLCA1-203ENST00000532918 BAG1Q99933 345 aaPredicted RBP11.81□□□□□ -0.52
COLCA1-203ENST00000532918 ZBED2Q9BTP6 218 aa11.81□□□□□ -0.52
COLCA1-203ENST00000532918 PARP2Q9UGN5 583 aa11.81□□□□□ -0.52
COLCA1-203ENST00000532918 SORBS3O60504 671 aa11.81□□□□□ -0.52
COLCA1-203ENST00000532918 ATP2C2O75185 946 aa11.81□□□□□ -0.52
COLCA1-203ENST00000532918 PSAPP07602 524 aa11.81□□□□□ -0.52
COLCA1-203ENST00000532918 LONP1P36776 959 aaKnown RBP11.81□□□□□ -0.52
COLCA1-203ENST00000532918 TRAPPC10P48553 1259 aa11.81□□□□□ -0.52
COLCA1-203ENST00000532918 CYP2J2P51589 502 aa11.81□□□□□ -0.52
COLCA1-203ENST00000532918 NLRP12P59046 1061 aa11.81□□□□□ -0.52
COLCA1-203ENST00000532918 ST7Q9NRC1 585 aa11.81□□□□□ -0.52
COLCA1-203ENST00000532918 PANK4Q9NVE7 773 aa11.81□□□□□ -0.52
COLCA1-203ENST00000532918 RIPOR2Q9Y4F9 1068 aa11.81□□□□□ -0.52
COLCA1-203ENST00000532918 PFKFB2O60825 505 aa11.8□□□□□ -0.52
COLCA1-203ENST00000532918 GAP43P17677 238 aa11.8□□□□□ -0.52
COLCA1-203ENST00000532918 ITIH3Q06033 890 aa11.8□□□□□ -0.52
COLCA1-203ENST00000532918 KLHL30Q0D2K2 578 aa11.8□□□□□ -0.52
COLCA1-203ENST00000532918 HADHQ16836 314 aaKnown RBP11.8□□□□□ -0.52
COLCA1-203ENST00000532918 TRIM50Q86XT4 487 aa11.8□□□□□ -0.52
COLCA1-203ENST00000532918 SMC1BQ8NDV3 1235 aa11.8□□□□□ -0.52
COLCA1-203ENST00000532918 ANKRD36BP1Q96IX9 119 aa11.8□□□□□ -0.52
COLCA1-203ENST00000532918 GCNAQ96QF7 691 aa11.8□□□□□ -0.52
COLCA1-203ENST00000532918 CLSTN2Q9H4D0 955 aa11.8□□□□□ -0.52
COLCA1-203ENST00000532918 PTCH1Q13635 1447 aa11.8□□□□□ -0.52
COLCA1-203ENST00000532918 TUBB2AQ13885 445 aa11.8□□□□□ -0.52
COLCA1-203ENST00000532918 NAA25Q14CX7 972 aa11.8□□□□□ -0.52
COLCA1-203ENST00000532918 C8orf34Q49A92 452 aa11.8□□□□□ -0.52
COLCA1-203ENST00000532918 ZNF569Q5MCW4 686 aa11.8□□□□□ -0.52
COLCA1-203ENST00000532918 FAM81BQ96LP2 452 aa11.8□□□□□ -0.52
COLCA1-203ENST00000532918 TUBB2BQ9BVA1 445 aa11.8□□□□□ -0.52
COLCA1-203ENST00000532918 PALD1Q9ULE6 856 aa11.8□□□□□ -0.52
COLCA1-203ENST00000532918 PHLPP2Q6ZVD8 1323 aa11.8□□□□□ -0.52
COLCA1-203ENST00000532918 ADD2P35612 726 aa11.8□□□□□ -0.52
COLCA1-203ENST00000532918 CRKP46108 304 aa11.8□□□□□ -0.52
COLCA1-203ENST00000532918 MFSD14CQ5VZR4 134 aa11.8□□□□□ -0.52
COLCA1-203ENST00000532918 UIMC1Q96RL1 719 aa11.8□□□□□ -0.52
COLCA1-203ENST00000532918 BRIP1Q9BX63 1249 aa11.8□□□□□ -0.52
COLCA1-203ENST00000532918 MAPK8IP1Q9UQF2 711 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms