RNA–Protein interactions for RNA: ENST00000532708.5

TRAF3IP2-212, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,956 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-212ENST00000532708 JMJD4Q9H9V9 463 aa13.87□□□□□ -0.19
TRAF3IP2-212ENST00000532708 HPS5Q9UPZ3 1129 aa13.87□□□□□ -0.19
TRAF3IP2-212ENST00000532708 RIPK3Q9Y572 518 aa13.87□□□□□ -0.19
TRAF3IP2-212ENST00000532708 ZNF536O15090 1300 aa13.87□□□□□ -0.19
TRAF3IP2-212ENST00000532708 GOLGA8AA7E2F4 631 aa13.87□□□□□ -0.19
TRAF3IP2-212ENST00000532708 CYTH3O43739 400 aa13.87□□□□□ -0.19
TRAF3IP2-212ENST00000532708 PDIA3P30101 505 aaKnown RBP13.87□□□□□ -0.19
TRAF3IP2-212ENST00000532708 CDC27P30260 824 aa13.87□□□□□ -0.19
TRAF3IP2-212ENST00000532708 CCNA1P78396 465 aa13.87□□□□□ -0.19
TRAF3IP2-212ENST00000532708 STK3Q13188 491 aa13.87□□□□□ -0.19
TRAF3IP2-212ENST00000532708 RTN1Q16799 776 aa13.87□□□□□ -0.19
TRAF3IP2-212ENST00000532708 SNRNP48Q6IEG0 339 aaKnown RBP13.87□□□□□ -0.19
TRAF3IP2-212ENST00000532708 NCAPG2Q86XI2 1143 aa13.87□□□□□ -0.19
TRAF3IP2-212ENST00000532708 SRBD1Q8N5C6 995 aaKnown RBP13.87□□□□□ -0.19
TRAF3IP2-212ENST00000532708 FDX1P10109 184 aa13.86□□□□□ -0.19
TRAF3IP2-212ENST00000532708 ERCC3P19447 782 aa13.86□□□□□ -0.19
TRAF3IP2-212ENST00000532708 ADD1P35611 737 aaKnown RBP13.86□□□□□ -0.19
TRAF3IP2-212ENST00000532708 METAP2P50579 478 aaKnown RBP eCLIP13.86□□□□□ -0.19
TRAF3IP2-212ENST00000532708 FCGRTP55899 365 aa13.86□□□□□ -0.19
TRAF3IP2-212ENST00000532708 EVCP57679 992 aa13.86□□□□□ -0.19
TRAF3IP2-212ENST00000532708 CCT2P78371 535 aaKnown RBP13.86□□□□□ -0.19
TRAF3IP2-212ENST00000532708 HOMER1Q86YM7 354 aa13.86□□□□□ -0.19
TRAF3IP2-212ENST00000532708 TEX13BQ9BXU2 312 aa13.86□□□□□ -0.19
TRAF3IP2-212ENST00000532708 ALDH8A1Q9H2A2 487 aaPredicted RBP13.86□□□□□ -0.19
TRAF3IP2-212ENST00000532708 FAM217BQ9NTX9 383 aaPredicted RBP13.86□□□□□ -0.19
TRAF3IP2-212ENST00000532708 TPCN1Q9ULQ1 816 aa13.86□□□□□ -0.19
TRAF3IP2-212ENST00000532708 HTTP42858 3142 aa13.86□□□□□ -0.19
TRAF3IP2-212ENST00000532708 MGAMO43451 1857 aa13.86□□□□□ -0.19
TRAF3IP2-212ENST00000532708 TNPO2O14787 897 aaKnown RBP13.85□□□□□ -0.19
TRAF3IP2-212ENST00000532708 CDC37Q16543 378 aaPredicted RBP13.85□□□□□ -0.19
TRAF3IP2-212ENST00000532708 RIOX2Q8IUF8 465 aa13.85□□□□□ -0.19
TRAF3IP2-212ENST00000532708 RIOX1Q9H6W3 641 aa13.85□□□□□ -0.19
TRAF3IP2-212ENST00000532708 NCOA5Q9HCD5 579 aaKnown RBP13.85□□□□□ -0.19
TRAF3IP2-212ENST00000532708 CWC22Q9HCG8 908 aaKnown RBP13.85□□□□□ -0.19
TRAF3IP2-212ENST00000532708 PRDM10Q9NQV6 1147 aa13.85□□□□□ -0.19
TRAF3IP2-212ENST00000532708 HOMER2Q9NSB8 354 aa13.85□□□□□ -0.19
TRAF3IP2-212ENST00000532708 TRIM17Q9Y577 477 aa13.85□□□□□ -0.19
TRAF3IP2-212ENST00000532708 ATP2A1O14983 1001 aa13.85□□□□□ -0.19
TRAF3IP2-212ENST00000532708 MAPK4P31152 587 aa13.85□□□□□ -0.19
TRAF3IP2-212ENST00000532708 GNAQP50148 359 aa13.85□□□□□ -0.19
TRAF3IP2-212ENST00000532708 QRICH1Q2TAL8 776 aa13.85□□□□□ -0.19
TRAF3IP2-212ENST00000532708 TMTC3Q6ZXV5 915 aa13.85□□□□□ -0.19
TRAF3IP2-212ENST00000532708 GPR142Q7Z601 462 aa13.85□□□□□ -0.19
TRAF3IP2-212ENST00000532708 PIGSQ96S52 555 aa13.85□□□□□ -0.19
TRAF3IP2-212ENST00000532708 CCPG1Q9ULG6 757 aa13.85□□□□□ -0.19
TRAF3IP2-212ENST00000532708 MYH6P13533 1939 aa13.85□□□□□ -0.19
TRAF3IP2-212ENST00000532708 hCG_1642624A0A1W2PR95 340 aa13.84□□□□□ -0.19
TRAF3IP2-212ENST00000532708 PPFIA3O75145 1194 aa13.84□□□□□ -0.19
TRAF3IP2-212ENST00000532708 ICAM1P05362 532 aa13.84□□□□□ -0.19
TRAF3IP2-212ENST00000532708 ALAS1P13196 640 aa13.84□□□□□ -0.19
TRAF3IP2-212ENST00000532708 OAZ1P54368 228 aa13.84□□□□□ -0.19
TRAF3IP2-212ENST00000532708 RABEP1Q15276 862 aa13.84□□□□□ -0.19
TRAF3IP2-212ENST00000532708 ANKRD1Q15327 319 aa13.84□□□□□ -0.19
TRAF3IP2-212ENST00000532708 USH1GQ495M9 461 aa13.84□□□□□ -0.19
TRAF3IP2-212ENST00000532708 OTOP1Q7RTM1 612 aa13.84□□□□□ -0.19
TRAF3IP2-212ENST00000532708 ZNF274Q96GC6 653 aaPredicted RBP13.84□□□□□ -0.19
TRAF3IP2-212ENST00000532708 RBM28Q9NW13 759 aaKnown RBP13.84□□□□□ -0.19
TRAF3IP2-212ENST00000532708 GABRQQ9UN88 632 aa13.84□□□□□ -0.19
TRAF3IP2-212ENST00000532708 SLC25A27O95847 323 aa13.83□□□□□ -0.19
TRAF3IP2-212ENST00000532708 RCAN1P53805 252 aa13.83□□□□□ -0.19
TRAF3IP2-212ENST00000532708 PLEKHH3Q7Z736 793 aa13.83□□□□□ -0.19
TRAF3IP2-212ENST00000532708 SHCBP1Q8NEM2 672 aa13.83□□□□□ -0.19
TRAF3IP2-212ENST00000532708 COA7Q96BR5 231 aa13.83□□□□□ -0.19
TRAF3IP2-212ENST00000532708 MTMR8Q96EF0 704 aa13.83□□□□□ -0.19
TRAF3IP2-212ENST00000532708 LZTS2Q9BRK4 669 aa13.83□□□□□ -0.19
TRAF3IP2-212ENST00000532708 SPZ1Q9BXG8 430 aa13.83□□□□□ -0.19
TRAF3IP2-212ENST00000532708 MROH8Q9H579 483 aa13.83□□□□□ -0.19
TRAF3IP2-212ENST00000532708 ZBTB5O15062 677 aa13.83□□□□□ -0.2
TRAF3IP2-212ENST00000532708 PPP1R11O60927 126 aaPredicted RBP13.83□□□□□ -0.2
TRAF3IP2-212ENST00000532708 DTNBO60941 627 aa13.83□□□□□ -0.2
TRAF3IP2-212ENST00000532708 LARGE1O95461 756 aa13.83□□□□□ -0.2
TRAF3IP2-212ENST00000532708 PRKCZQ05513 592 aa13.83□□□□□ -0.2
TRAF3IP2-212ENST00000532708 ARHGEF6Q15052 776 aa13.83□□□□□ -0.2
TRAF3IP2-212ENST00000532708 MUM1L1Q5H9M0 696 aa13.83□□□□□ -0.2
TRAF3IP2-212ENST00000532708 TRERF1Q96PN7 1200 aa13.83□□□□□ -0.2
TRAF3IP2-212ENST00000532708 PTPREP23469 700 aa13.82□□□□□ -0.2
TRAF3IP2-212ENST00000532708 SMARCA1P28370 1054 aa13.82□□□□□ -0.2
TRAF3IP2-212ENST00000532708 FUT2Q10981 343 aa13.82□□□□□ -0.2
TRAF3IP2-212ENST00000532708 ME3Q16798 604 aa13.82□□□□□ -0.2
TRAF3IP2-212ENST00000532708 CTU1Q7Z7A3 348 aaKnown RBP13.82□□□□□ -0.2
TRAF3IP2-212ENST00000532708 FBXO11Q86XK2 927 aa13.82□□□□□ -0.2
TRAF3IP2-212ENST00000532708 RRP36Q96EU6 259 aaKnown RBP13.82□□□□□ -0.2
TRAF3IP2-212ENST00000532708 SLKQ9H2G2 1235 aaPredicted RBP13.82□□□□□ -0.2
TRAF3IP2-212ENST00000532708 RNF146Q9NTX7 359 aa13.82□□□□□ -0.2
TRAF3IP2-212ENST00000532708 IVNS1ABPQ9Y6Y0 642 aa13.82□□□□□ -0.2
TRAF3IP2-212ENST00000532708 CNTNAP5Q8WYK1 1306 aa13.82□□□□□ -0.2
TRAF3IP2-212ENST00000532708 CCDC196A0A1B0GTZ2 297 aa13.82□□□□□ -0.2
TRAF3IP2-212ENST00000532708 HOXD10P28358 340 aa13.82□□□□□ -0.2
TRAF3IP2-212ENST00000532708 FLT3LGP49771 235 aa13.82□□□□□ -0.2
TRAF3IP2-212ENST00000532708 SCRN1Q12765 414 aa13.82□□□□□ -0.2
TRAF3IP2-212ENST00000532708 PPP2R5BQ15173 497 aa13.82□□□□□ -0.2
TRAF3IP2-212ENST00000532708 NECAB1Q8N987 351 aa13.82□□□□□ -0.2
TRAF3IP2-212ENST00000532708 SRRDQ9UH36 339 aa13.82□□□□□ -0.2
TRAF3IP2-212ENST00000532708 GJD2Q9UKL4 321 aa13.82□□□□□ -0.2
TRAF3IP2-212ENST00000532708 V9GY48 417 aaPredicted RBP13.82□□□□□ -0.2
TRAF3IP2-212ENST00000532708 ZNFX1Q9P2E3 1918 aaKnown RBP13.81□□□□□ -0.2
TRAF3IP2-212ENST00000532708 NID2Q14112 1375 aa13.81□□□□□ -0.2
TRAF3IP2-212ENST00000532708 PNMA6FA0A0J9YX94 578 aa13.81□□□□□ -0.2
TRAF3IP2-212ENST00000532708 FCER1AP12319 257 aa13.81□□□□□ -0.2
TRAF3IP2-212ENST00000532708 NTRK3Q16288 839 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms