RNA–Protein interactions for RNA: ENST00000532285.1

CAPN1-222, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-222ENST00000532285 ESYT1Q9BSJ8 1104 aa26.96■■□□□ 1.91
CAPN1-222ENST00000532285 SMCHD1A6NHR9 2005 aa26.95■■□□□ 1.91
CAPN1-222ENST00000532285 CYBAP13498 195 aa26.95■■□□□ 1.9
CAPN1-222ENST00000532285 SLC16A2P36021 539 aa26.95■■□□□ 1.9
CAPN1-222ENST00000532285 CCDC174Q6PII3 467 aa26.95■■□□□ 1.9
CAPN1-222ENST00000532285 ANKRD35Q8N283 1001 aa26.95■■□□□ 1.9
CAPN1-222ENST00000532285 RBM8AQ9Y5S9 174 aaKnown RBP26.95■■□□□ 1.9
CAPN1-222ENST00000532285 DNAJC25-GNG10A0A024R161 153 aa26.94■■□□□ 1.9
CAPN1-222ENST00000532285 MSCO60682 206 aa26.94■■□□□ 1.9
CAPN1-222ENST00000532285 SNAP25P60880 206 aa26.94■■□□□ 1.9
CAPN1-222ENST00000532285 GPATCH4Q5T3I0 446 aaKnown RBP26.94■■□□□ 1.9
CAPN1-222ENST00000532285 PRPF38BQ5VTL8 546 aaKnown RBP26.94■■□□□ 1.9
CAPN1-222ENST00000532285 TRPV1Q8NER1 839 aa26.94■■□□□ 1.9
CAPN1-222ENST00000532285 HTATIP2Q9BUP3 242 aa26.94■■□□□ 1.9
CAPN1-222ENST00000532285 RANBP17Q9H2T7 1088 aaKnown RBP26.94■■□□□ 1.9
CAPN1-222ENST00000532285 ACAD9Q9H845 621 aa26.94■■□□□ 1.9
CAPN1-222ENST00000532285 HOMER2Q9NSB8 354 aa26.94■■□□□ 1.9
CAPN1-222ENST00000532285 E7EWF7 191 aa26.93■■□□□ 1.9
CAPN1-222ENST00000532285 NECAB2Q7Z6G3 386 aa26.93■■□□□ 1.9
CAPN1-222ENST00000532285 TINF2Q9BSI4 451 aa26.93■■□□□ 1.9
CAPN1-222ENST00000532285 DDX20Q9UHI6 824 aaKnown RBP26.93■■□□□ 1.9
CAPN1-222ENST00000532285 NRBP1Q9UHY1 535 aa26.93■■□□□ 1.9
CAPN1-222ENST00000532285 ICAM1P05362 532 aa26.92■■□□□ 1.9
CAPN1-222ENST00000532285 ALAS1P13196 640 aa26.92■■□□□ 1.9
CAPN1-222ENST00000532285 IFIT1BQ5T764 474 aaKnown RBP26.92■■□□□ 1.9
CAPN1-222ENST00000532285 CYB5R4Q7L1T6 521 aa26.92■■□□□ 1.9
CAPN1-222ENST00000532285 RALYLQ86SE5 291 aaKnown RBP26.92■■□□□ 1.9
CAPN1-222ENST00000532285 MSL3Q8N5Y2 521 aaKnown RBP26.92■■□□□ 1.9
CAPN1-222ENST00000532285 NCOA7Q8NI08 942 aa26.92■■□□□ 1.9
CAPN1-222ENST00000532285 PAWRQ96IZ0 340 aaKnown RBP26.92■■□□□ 1.9
CAPN1-222ENST00000532285 TRERF1Q96PN7 1200 aa26.92■■□□□ 1.9
CAPN1-222ENST00000532285 LSG1Q9H089 658 aaKnown RBP26.92■■□□□ 1.9
CAPN1-222ENST00000532285 RNF146Q9NTX7 359 aa26.92■■□□□ 1.9
CAPN1-222ENST00000532285 CCPG1Q9ULG6 757 aa26.92■■□□□ 1.9
CAPN1-222ENST00000532285 CENPBP07199 599 aaPredicted RBP26.91■■□□□ 1.9
CAPN1-222ENST00000532285 CASC1Q6TDU7 716 aa26.91■■□□□ 1.9
CAPN1-222ENST00000532285 MCM3APO60318 1980 aa26.9■■□□□ 1.9
CAPN1-222ENST00000532285 SEPT4O43236 478 aa26.9■■□□□ 1.9
CAPN1-222ENST00000532285 SEC23AQ15436 765 aa26.9■■□□□ 1.9
CAPN1-222ENST00000532285 PRAMEF19Q5SWL8 479 aa26.9■■□□□ 1.9
CAPN1-222ENST00000532285 ZNF467Q7Z7K2 595 aaPredicted RBP26.9■■□□□ 1.9
CAPN1-222ENST00000532285 DIS3LQ8TF46 1054 aaKnown RBP26.9■■□□□ 1.9
CAPN1-222ENST00000532285 DPF3Q92784 378 aa26.9■■□□□ 1.9
CAPN1-222ENST00000532285 PNMA2Q9UL42 364 aa26.9■■□□□ 1.9
CAPN1-222ENST00000532285 TAF6LQ9Y6J9 622 aa26.9■■□□□ 1.9
CAPN1-222ENST00000532285 MYH6P13533 1939 aa26.9■■□□□ 1.9
CAPN1-222ENST00000532285 GOLGA8HP0CJ92 632 aa26.89■■□□□ 1.9
CAPN1-222ENST00000532285 MNX1P50219 401 aaPredicted RBP26.89■■□□□ 1.9
CAPN1-222ENST00000532285 ASPRV1Q53RT3 343 aa26.89■■□□□ 1.9
CAPN1-222ENST00000532285 MAMDC4Q6UXC1 1216 aa26.89■■□□□ 1.9
CAPN1-222ENST00000532285 ANO2Q9NQ90 1003 aa26.89■■□□□ 1.9
CAPN1-222ENST00000532285 PFASO15067 1338 aa26.89■■□□□ 1.89
CAPN1-222ENST00000532285 SYNGAP1Q96PV0 1343 aa26.89■■□□□ 1.89
CAPN1-222ENST00000532285 ERICH6BQ5W0A0 696 aa26.88■■□□□ 1.89
CAPN1-222ENST00000532285 STOX1Q6ZVD7 989 aa26.88■■□□□ 1.89
CAPN1-222ENST00000532285 A1CFQ9NQ94 594 aaKnown RBP26.88■■□□□ 1.89
CAPN1-222ENST00000532285 ALPK3Q96L96 1907 aa26.87■■□□□ 1.89
CAPN1-222ENST00000532285 ERICH2A1L162 156 aa26.87■■□□□ 1.89
CAPN1-222ENST00000532285 IFIT3O14879 490 aaKnown RBP26.87■■□□□ 1.89
CAPN1-222ENST00000532285 CDC45O75419 566 aa26.87■■□□□ 1.89
CAPN1-222ENST00000532285 PARP1P09874 1014 aaKnown RBP26.87■■□□□ 1.89
CAPN1-222ENST00000532285 SART3Q15020 963 aaKnown RBP26.87■■□□□ 1.89
CAPN1-222ENST00000532285 C11orf49Q9H6J7 331 aa26.87■■□□□ 1.89
CAPN1-222ENST00000532285 CNPY2Q9Y2B0 182 aa26.87■■□□□ 1.89
CAPN1-222ENST00000532285 POTEB2H3BUK9 544 aa26.86■■□□□ 1.89
CAPN1-222ENST00000532285 MUM1L1Q5H9M0 696 aa26.86■■□□□ 1.89
CAPN1-222ENST00000532285 UBA5Q9GZZ9 404 aa26.86■■□□□ 1.89
CAPN1-222ENST00000532285 NECTIN1Q15223 517 aa26.85■■□□□ 1.89
CAPN1-222ENST00000532285 FAM133AQ8N9E0 248 aa26.85■■□□□ 1.89
CAPN1-222ENST00000532285 SLC27A2O14975 620 aa26.84■■□□□ 1.89
CAPN1-222ENST00000532285 CNTN2Q02246 1040 aa26.84■■□□□ 1.89
CAPN1-222ENST00000532285 WTAPQ15007 396 aa26.84■■□□□ 1.89
CAPN1-222ENST00000532285 MB21D2Q8IYB1 491 aaPredicted RBP26.84■■□□□ 1.89
CAPN1-222ENST00000532285 ARRDC4Q8NCT1 418 aa26.84■■□□□ 1.89
CAPN1-222ENST00000532285 FGD4Q96M96 766 aa26.84■■□□□ 1.89
CAPN1-222ENST00000532285 PPP4R2Q9NY27 417 aa26.84■■□□□ 1.89
CAPN1-222ENST00000532285 CYP39A1Q9NYL5 469 aa26.84■■□□□ 1.89
CAPN1-222ENST00000532285 LCTP09848 1927 aa26.84■■□□□ 1.89
CAPN1-222ENST00000532285 WDR19Q8NEZ3 1342 aa26.84■■□□□ 1.89
CAPN1-222ENST00000532285 SNAI1O95863 264 aaPredicted RBP26.83■■□□□ 1.89
CAPN1-222ENST00000532285 ZNF865P0CJ78 1059 aaPredicted RBP26.83■■□□□ 1.89
CAPN1-222ENST00000532285 TAL1P17542 331 aaPredicted RBP26.83■■□□□ 1.89
CAPN1-222ENST00000532285 CREB3L3Q68CJ9 461 aa26.83■■□□□ 1.89
CAPN1-222ENST00000532285 CHST3Q7LGC8 479 aa26.83■■□□□ 1.89
CAPN1-222ENST00000532285 CPVLQ9H3G5 476 aa26.83■■□□□ 1.89
CAPN1-222ENST00000532285 COL6A1P12109 1028 aa26.82■■□□□ 1.88
CAPN1-222ENST00000532285 ANTXR2P58335 489 aa26.82■■□□□ 1.88
CAPN1-222ENST00000532285 TMEM67Q5HYA8 995 aa26.82■■□□□ 1.88
CAPN1-222ENST00000532285 ANO1Q5XXA6 986 aa26.82■■□□□ 1.88
CAPN1-222ENST00000532285 NSMFQ6X4W1 530 aa26.82■■□□□ 1.88
CAPN1-222ENST00000532285 ADGRF4Q8IZF3 695 aa26.82■■□□□ 1.88
CAPN1-222ENST00000532285 MTA3Q9BTC8 594 aa26.82■■□□□ 1.88
CAPN1-222ENST00000532285 NR2E3Q9Y5X4 410 aa26.82■■□□□ 1.88
CAPN1-222ENST00000532285 DNM1LO00429 736 aa26.81■■□□□ 1.88
CAPN1-222ENST00000532285 EVI5O60447 810 aa26.81■■□□□ 1.88
CAPN1-222ENST00000532285 AKR1A1P14550 325 aa26.81■■□□□ 1.88
CAPN1-222ENST00000532285 RNF20Q5VTR2 975 aa26.81■■□□□ 1.88
CAPN1-222ENST00000532285 IGDCC4Q8TDY8 1250 aa26.81■■□□□ 1.88
CAPN1-222ENST00000532285 ABHD16BQ9H3Z7 469 aa26.81■■□□□ 1.88
CAPN1-222ENST00000532285 CDKN2AIPQ9NXV6 580 aaPredicted RBP26.81■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms