RNA–Protein interactions for RNA: ENST00000532078.1

DEPDC7-204, Transcript of DEP domain containing 7, humanhuman

TSL 2

Gene DEPDC7, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC7-204ENST00000532078 ZMYM1Q5SVZ6 1142 aa18.08■□□□□ 0.48
DEPDC7-204ENST00000532078 RNF180Q86T96 592 aa18.08■□□□□ 0.48
DEPDC7-204ENST00000532078 MSL3Q8N5Y2 521 aaKnown RBP18.08■□□□□ 0.48
DEPDC7-204ENST00000532078 GMCL1P1Q8NEA9 526 aa18.08■□□□□ 0.48
DEPDC7-204ENST00000532078 OTUD7AQ8TE49 926 aaPredicted RBP18.08■□□□□ 0.48
DEPDC7-204ENST00000532078 MKL1Q969V6 931 aa18.08■□□□□ 0.48
DEPDC7-204ENST00000532078 SEC62Q99442 399 aaKnown RBP18.08■□□□□ 0.48
DEPDC7-204ENST00000532078 FEM1BQ9UK73 627 aa18.08■□□□□ 0.48
DEPDC7-204ENST00000532078 SYNGAP1Q96PV0 1343 aa18.07■□□□□ 0.48
DEPDC7-204ENST00000532078 AKR1A1P14550 325 aa18.07■□□□□ 0.48
DEPDC7-204ENST00000532078 RRP1P56182 461 aaKnown RBP18.07■□□□□ 0.48
DEPDC7-204ENST00000532078 TRIM60Q495X7 471 aa18.07■□□□□ 0.48
DEPDC7-204ENST00000532078 C1orf53Q5VUE5 145 aa18.07■□□□□ 0.48
DEPDC7-204ENST00000532078 LRRC47Q8N1G4 583 aaKnown RBP18.07■□□□□ 0.48
DEPDC7-204ENST00000532078 NEDD1Q8NHV4 660 aa18.07■□□□□ 0.48
DEPDC7-204ENST00000532078 TMC2Q8TDI7 906 aa18.07■□□□□ 0.48
DEPDC7-204ENST00000532078 FERMT2Q96AC1 680 aa18.07■□□□□ 0.48
DEPDC7-204ENST00000532078 KIFC2Q96AC6 838 aa18.07■□□□□ 0.48
DEPDC7-204ENST00000532078 DDX11Q96FC9 970 aa18.07■□□□□ 0.48
DEPDC7-204ENST00000532078 PRDM5Q9NQX1 630 aaPredicted RBP18.07■□□□□ 0.48
DEPDC7-204ENST00000532078 PHF24Q9UPV7 400 aa18.07■□□□□ 0.48
DEPDC7-204ENST00000532078 TAL1P17542 331 aaPredicted RBP18.06■□□□□ 0.48
DEPDC7-204ENST00000532078 OAZ1P54368 228 aa18.06■□□□□ 0.48
DEPDC7-204ENST00000532078 PPARAQ07869 468 aa18.06■□□□□ 0.48
DEPDC7-204ENST00000532078 PPP4R3BQ5MIZ7 849 aa18.06■□□□□ 0.48
DEPDC7-204ENST00000532078 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.06■□□□□ 0.48
DEPDC7-204ENST00000532078 CPXCR1Q8N123 301 aa18.06■□□□□ 0.48
DEPDC7-204ENST00000532078 SLC38A10Q9HBR0 1119 aa18.06■□□□□ 0.48
DEPDC7-204ENST00000532078 FBXO40Q9UH90 709 aa18.06■□□□□ 0.48
DEPDC7-204ENST00000532078 RIPK3Q9Y572 518 aa18.06■□□□□ 0.48
DEPDC7-204ENST00000532078 DNAJC25-GNG10A0A024R161 153 aa18.05■□□□□ 0.48
DEPDC7-204ENST00000532078 PGK1P00558 417 aa18.05■□□□□ 0.48
DEPDC7-204ENST00000532078 ZNF865P0CJ78 1059 aaPredicted RBP18.05■□□□□ 0.48
DEPDC7-204ENST00000532078 SLC4A3P48751 1232 aa18.05■□□□□ 0.48
DEPDC7-204ENST00000532078 Q7L0L9 218 aa18.05■□□□□ 0.48
DEPDC7-204ENST00000532078 RAVER2Q9HCJ3 691 aaKnown RBP18.05■□□□□ 0.48
DEPDC7-204ENST00000532078 PDLIM7Q9NR12 457 aa18.05■□□□□ 0.48
DEPDC7-204ENST00000532078 ISY1Q9ULR0 285 aaKnown RBP18.05■□□□□ 0.48
DEPDC7-204ENST00000532078 SMCHD1A6NHR9 2005 aa18.05■□□□□ 0.48
DEPDC7-204ENST00000532078 SALL3Q9BXA9 1300 aa18.04■□□□□ 0.48
DEPDC7-204ENST00000532078 FDX1P10109 184 aa18.04■□□□□ 0.48
DEPDC7-204ENST00000532078 BMP3P12645 472 aa18.04■□□□□ 0.48
DEPDC7-204ENST00000532078 TFAP4Q01664 338 aa18.04■□□□□ 0.48
DEPDC7-204ENST00000532078 SLFN13Q68D06 897 aa18.04■□□□□ 0.48
DEPDC7-204ENST00000532078 MAMDC4Q6UXC1 1216 aa18.04■□□□□ 0.48
DEPDC7-204ENST00000532078 CHST13Q8NET6 341 aa18.04■□□□□ 0.48
DEPDC7-204ENST00000532078 A0A1W2PQ45 241 aaPredicted RBP18.03■□□□□ 0.48
DEPDC7-204ENST00000532078 A0A1W2PQY0 241 aa18.03■□□□□ 0.48
DEPDC7-204ENST00000532078 C2orf72A6NCS6 295 aa18.03■□□□□ 0.48
DEPDC7-204ENST00000532078 STAT2P52630 851 aa18.03■□□□□ 0.48
DEPDC7-204ENST00000532078 ANKRD35Q8N283 1001 aa18.03■□□□□ 0.48
DEPDC7-204ENST00000532078 SLC17A8Q8NDX2 589 aa18.03■□□□□ 0.48
DEPDC7-204ENST00000532078 LENG1Q96BZ8 264 aaPredicted RBP18.03■□□□□ 0.48
DEPDC7-204ENST00000532078 GMCL1Q96IK5 515 aa18.03■□□□□ 0.48
DEPDC7-204ENST00000532078 ZHX1Q9UKY1 873 aaPredicted RBP18.03■□□□□ 0.48
DEPDC7-204ENST00000532078 FAM184BQ9ULE4 1060 aa18.03■□□□□ 0.48
DEPDC7-204ENST00000532078 SYNRGQ9UMZ2 1314 aa18.02■□□□□ 0.48
DEPDC7-204ENST00000532078 TMEM232C9JQI7 657 aa18.02■□□□□ 0.48
DEPDC7-204ENST00000532078 ADAMTS4O75173 837 aa18.02■□□□□ 0.48
DEPDC7-204ENST00000532078 TLE2Q04725 743 aa18.02■□□□□ 0.48
DEPDC7-204ENST00000532078 IKQ13123 557 aaPredicted RBP18.02■□□□□ 0.48
DEPDC7-204ENST00000532078 FAM160B2Q86V87 743 aa18.02■□□□□ 0.48
DEPDC7-204ENST00000532078 CHURC1Q8WUH1 139 aa18.02■□□□□ 0.48
DEPDC7-204ENST00000532078 TSEN34Q9BSV6 310 aaKnown RBP18.02■□□□□ 0.48
DEPDC7-204ENST00000532078 MTMR10Q9NXD2 777 aa18.02■□□□□ 0.48
DEPDC7-204ENST00000532078 STXBP5LQ9Y2K9 1186 aa18.02■□□□□ 0.48
DEPDC7-204ENST00000532078 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.02■□□□□ 0.48
DEPDC7-204ENST00000532078 A0A0C4DFX4 3053 aa18.01■□□□□ 0.47
DEPDC7-204ENST00000532078 TSPY2A6NKD2 308 aa18.01■□□□□ 0.47
DEPDC7-204ENST00000532078 SNAI1O95863 264 aaPredicted RBP18.01■□□□□ 0.47
DEPDC7-204ENST00000532078 SLC1A4P43007 532 aa18.01■□□□□ 0.47
DEPDC7-204ENST00000532078 ANKRD45Q5TZF3 282 aa18.01■□□□□ 0.47
DEPDC7-204ENST00000532078 FAM109BQ6ICB4 259 aaPredicted RBP18.01■□□□□ 0.47
DEPDC7-204ENST00000532078 CCDC129Q6ZRS4 1044 aa18.01■□□□□ 0.47
DEPDC7-204ENST00000532078 BADQ92934 168 aa18.01■□□□□ 0.47
DEPDC7-204ENST00000532078 EVI5LQ96CN4 794 aa18.01■□□□□ 0.47
DEPDC7-204ENST00000532078 HOMER2Q9NSB8 354 aa18.01■□□□□ 0.47
DEPDC7-204ENST00000532078 STX8Q9UNK0 236 aa18.01■□□□□ 0.47
DEPDC7-204ENST00000532078 TACC3Q9Y6A5 838 aa18.01■□□□□ 0.47
DEPDC7-204ENST00000532078 TRIM43BA6NCK2 446 aa18■□□□□ 0.47
DEPDC7-204ENST00000532078 MOXD2PA6NHM9 499 aa18■□□□□ 0.47
DEPDC7-204ENST00000532078 FOXP2O15409 715 aa18■□□□□ 0.47
DEPDC7-204ENST00000532078 DUSP11O75319 330 aaKnown RBP18■□□□□ 0.47
DEPDC7-204ENST00000532078 CLTBP09497 229 aa18■□□□□ 0.47
DEPDC7-204ENST00000532078 SH3RF1Q7Z6J0 888 aa18■□□□□ 0.47
DEPDC7-204ENST00000532078 NUP133Q8WUM0 1156 aa18■□□□□ 0.47
DEPDC7-204ENST00000532078 TRIM43Q96BQ3 446 aaPredicted RBP18■□□□□ 0.47
DEPDC7-204ENST00000532078 CRBNQ96SW2 442 aa18■□□□□ 0.47
DEPDC7-204ENST00000532078 ABHD16BQ9H3Z7 469 aa18■□□□□ 0.47
DEPDC7-204ENST00000532078 ACAD9Q9H845 621 aa18■□□□□ 0.47
DEPDC7-204ENST00000532078 CDKN2AIPQ9NXV6 580 aaPredicted RBP18■□□□□ 0.47
DEPDC7-204ENST00000532078 PLA2G6O60733 806 aa17.99■□□□□ 0.47
DEPDC7-204ENST00000532078 PQBP1O60828 265 aaKnown RBP17.99■□□□□ 0.47
DEPDC7-204ENST00000532078 ACLYP53396 1101 aa17.99■□□□□ 0.47
DEPDC7-204ENST00000532078 CTDSPL2Q05D32 466 aa17.99■□□□□ 0.47
DEPDC7-204ENST00000532078 HDAC1Q13547 482 aaPredicted RBP17.99■□□□□ 0.47
DEPDC7-204ENST00000532078 ACVR2BQ13705 512 aa17.99■□□□□ 0.47
DEPDC7-204ENST00000532078 ARMCX2Q7L311 632 aa17.99■□□□□ 0.47
DEPDC7-204ENST00000532078 STAG1Q8WVM7 1258 aa17.99■□□□□ 0.47
DEPDC7-204ENST00000532078 FGD4Q96M96 766 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms