RNA–Protein interactions for RNA: ENST00000531900.1

GPATCH4-216, Transcript of G-patch domain containing 4, humanhuman

TSL 2

Gene GPATCH4, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-216ENST00000531900 RALYLQ86SE5 291 aaKnown RBP12.67□□□□□ -0.38
GPATCH4-216ENST00000531900 IGDCC4Q8TDY8 1250 aa12.67□□□□□ -0.38
GPATCH4-216ENST00000531900 MAF1Q9H063 256 aa12.67□□□□□ -0.38
GPATCH4-216ENST00000531900 KAT14Q9H8E8 782 aa12.67□□□□□ -0.38
GPATCH4-216ENST00000531900 PCDH10Q9P2E7 1040 aa12.67□□□□□ -0.38
GPATCH4-216ENST00000531900 FBXO40Q9UH90 709 aa12.67□□□□□ -0.38
GPATCH4-216ENST00000531900 DNAJC25-GNG10A0A024R161 153 aa12.66□□□□□ -0.38
GPATCH4-216ENST00000531900 EVI5O60447 810 aa12.66□□□□□ -0.38
GPATCH4-216ENST00000531900 PRKAR2AP13861 404 aaKnown RBP12.66□□□□□ -0.38
GPATCH4-216ENST00000531900 ANTXR2P58335 489 aa12.66□□□□□ -0.38
GPATCH4-216ENST00000531900 SART3Q15020 963 aaKnown RBP12.66□□□□□ -0.38
GPATCH4-216ENST00000531900 ZNF792Q3KQV3 632 aa12.66□□□□□ -0.38
GPATCH4-216ENST00000531900 ASPRV1Q53RT3 343 aa12.66□□□□□ -0.38
GPATCH4-216ENST00000531900 IFIT1BQ5T764 474 aaKnown RBP12.66□□□□□ -0.38
GPATCH4-216ENST00000531900 SYDE2Q5VT97 1194 aa12.66□□□□□ -0.38
GPATCH4-216ENST00000531900 TTBK2Q6IQ55 1244 aa12.66□□□□□ -0.38
GPATCH4-216ENST00000531900 DPP9Q86TI2 863 aa12.66□□□□□ -0.38
GPATCH4-216ENST00000531900 MSL3Q8N5Y2 521 aaKnown RBP12.66□□□□□ -0.38
GPATCH4-216ENST00000531900 NPLOC4Q8TAT6 608 aa12.66□□□□□ -0.38
GPATCH4-216ENST00000531900 PAWRQ96IZ0 340 aaKnown RBP12.66□□□□□ -0.38
GPATCH4-216ENST00000531900 MAP3K14Q99558 947 aa12.66□□□□□ -0.38
GPATCH4-216ENST00000531900 RAVER2Q9HCJ3 691 aaKnown RBP12.66□□□□□ -0.38
GPATCH4-216ENST00000531900 WDR19Q8NEZ3 1342 aa12.65□□□□□ -0.38
GPATCH4-216ENST00000531900 ICAM1P05362 532 aa12.65□□□□□ -0.38
GPATCH4-216ENST00000531900 MCM5P33992 734 aa12.65□□□□□ -0.38
GPATCH4-216ENST00000531900 LIFRP42702 1097 aa12.65□□□□□ -0.38
GPATCH4-216ENST00000531900 CACNB2Q08289 660 aaPredicted RBP12.65□□□□□ -0.38
GPATCH4-216ENST00000531900 TROAPQ12815 778 aa12.65□□□□□ -0.38
GPATCH4-216ENST00000531900 TRIM32Q13049 653 aa12.65□□□□□ -0.38
GPATCH4-216ENST00000531900 KCTD2Q14681 263 aa12.65□□□□□ -0.38
GPATCH4-216ENST00000531900 CCL14Q16627 93 aa12.65□□□□□ -0.38
GPATCH4-216ENST00000531900 CCDC96Q2M329 555 aa12.65□□□□□ -0.38
GPATCH4-216ENST00000531900 MFSD14CQ5VZR4 134 aa12.65□□□□□ -0.38
GPATCH4-216ENST00000531900 SAMD1Q6SPF0 538 aaPredicted RBP12.65□□□□□ -0.38
GPATCH4-216ENST00000531900 ZNF467Q7Z7K2 595 aaPredicted RBP12.65□□□□□ -0.38
GPATCH4-216ENST00000531900 CPXCR1Q8N123 301 aa12.65□□□□□ -0.38
GPATCH4-216ENST00000531900 TMTC2Q8N394 836 aa12.65□□□□□ -0.38
GPATCH4-216ENST00000531900 MAML3Q96JK9 1138 aa12.65□□□□□ -0.38
GPATCH4-216ENST00000531900 TMEM87BQ96K49 555 aa12.65□□□□□ -0.38
GPATCH4-216ENST00000531900 MMP19Q99542 508 aa12.65□□□□□ -0.38
GPATCH4-216ENST00000531900 FLRT1Q9NZU1 646 aa12.65□□□□□ -0.38
GPATCH4-216ENST00000531900 NRBP1Q9UHY1 535 aa12.65□□□□□ -0.38
GPATCH4-216ENST00000531900 COLQQ9Y215 455 aaPredicted RBP12.65□□□□□ -0.38
GPATCH4-216ENST00000531900 CTDP1Q9Y5B0 961 aaPredicted RBP12.65□□□□□ -0.38
GPATCH4-216ENST00000531900 CEP290O15078 2479 aa12.65□□□□□ -0.38
GPATCH4-216ENST00000531900 BAZ2BQ9UIF8 2168 aaKnown RBP12.64□□□□□ -0.39
GPATCH4-216ENST00000531900 MYH6P13533 1939 aa12.64□□□□□ -0.39
GPATCH4-216ENST00000531900 ERICH2A1L162 156 aa12.64□□□□□ -0.39
GPATCH4-216ENST00000531900 PALM3A6NDB9 673 aaPredicted RBP12.64□□□□□ -0.39
GPATCH4-216ENST00000531900 IFIT3O14879 490 aaKnown RBP12.64□□□□□ -0.39
GPATCH4-216ENST00000531900 REC8O95072 547 aa12.64□□□□□ -0.39
GPATCH4-216ENST00000531900 HSPA4P34932 840 aa12.64□□□□□ -0.39
GPATCH4-216ENST00000531900 MAMDC4Q6UXC1 1216 aa12.64□□□□□ -0.39
GPATCH4-216ENST00000531900 AGBL1Q96MI9 1066 aa12.64□□□□□ -0.39
GPATCH4-216ENST00000531900 ACAD9Q9H845 621 aa12.64□□□□□ -0.39
GPATCH4-216ENST00000531900 OGDHLQ9ULD0 1010 aa12.64□□□□□ -0.39
GPATCH4-216ENST00000531900 PARP1P09874 1014 aaKnown RBP12.63□□□□□ -0.39
GPATCH4-216ENST00000531900 SLC16A2P36021 539 aa12.63□□□□□ -0.39
GPATCH4-216ENST00000531900 EXOSC10Q01780 885 aaKnown RBP12.63□□□□□ -0.39
GPATCH4-216ENST00000531900 IKQ13123 557 aaPredicted RBP12.63□□□□□ -0.39
GPATCH4-216ENST00000531900 KRT32Q14532 448 aa12.63□□□□□ -0.39
GPATCH4-216ENST00000531900 WTAPQ15007 396 aa12.63□□□□□ -0.39
GPATCH4-216ENST00000531900 CHRDL2Q6WN34 429 aa12.63□□□□□ -0.39
GPATCH4-216ENST00000531900 SGMS1Q86VZ5 419 aa12.63□□□□□ -0.39
GPATCH4-216ENST00000531900 RASEFQ8IZ41 740 aa12.63□□□□□ -0.39
GPATCH4-216ENST00000531900 RGS22Q8NE09 1264 aa12.63□□□□□ -0.39
GPATCH4-216ENST00000531900 MTMR8Q96EF0 704 aa12.63□□□□□ -0.39
GPATCH4-216ENST00000531900 TINF2Q9BSI4 451 aa12.63□□□□□ -0.39
GPATCH4-216ENST00000531900 LY9Q9HBG7 655 aa12.63□□□□□ -0.39
GPATCH4-216ENST00000531900 GPCPD1Q9NPB8 672 aa12.63□□□□□ -0.39
GPATCH4-216ENST00000531900 MAD2L2Q9UI95 211 aa12.63□□□□□ -0.39
GPATCH4-216ENST00000531900 FRMPD2Q68DX3 1309 aaPredicted RBP12.62□□□□□ -0.39
GPATCH4-216ENST00000531900 SH2B2O14492 632 aaPredicted RBP12.62□□□□□ -0.39
GPATCH4-216ENST00000531900 PRC1O43663 620 aa12.62□□□□□ -0.39
GPATCH4-216ENST00000531900 HMGB1P09429 215 aaKnown RBP12.62□□□□□ -0.39
GPATCH4-216ENST00000531900 GOLGA8HP0CJ92 632 aa12.62□□□□□ -0.39
GPATCH4-216ENST00000531900 CYBAP13498 195 aa12.62□□□□□ -0.39
GPATCH4-216ENST00000531900 SMARCA1P28370 1054 aa12.62□□□□□ -0.39
GPATCH4-216ENST00000531900 COL9A3Q14050 684 aaPredicted RBP12.62□□□□□ -0.39
GPATCH4-216ENST00000531900 GRM4Q14833 912 aa12.62□□□□□ -0.39
GPATCH4-216ENST00000531900 TMEM67Q5HYA8 995 aa12.62□□□□□ -0.39
GPATCH4-216ENST00000531900 LHX8Q68G74 356 aa12.62□□□□□ -0.39
GPATCH4-216ENST00000531900 FBXL16Q8N461 479 aa12.62□□□□□ -0.39
GPATCH4-216ENST00000531900 FAM133AQ8N9E0 248 aa12.62□□□□□ -0.39
GPATCH4-216ENST00000531900 TRERF1Q96PN7 1200 aa12.62□□□□□ -0.39
GPATCH4-216ENST00000531900 NEK1Q96PY6 1258 aa12.62□□□□□ -0.39
GPATCH4-216ENST00000531900 C11orf49Q9H6J7 331 aa12.62□□□□□ -0.39
GPATCH4-216ENST00000531900 RIOX1Q9H6W3 641 aa12.62□□□□□ -0.39
GPATCH4-216ENST00000531900 SENP2Q9HC62 589 aa12.62□□□□□ -0.39
GPATCH4-216ENST00000531900 RNF146Q9NTX7 359 aa12.62□□□□□ -0.39
GPATCH4-216ENST00000531900 MTMR7Q9Y216 660 aa12.62□□□□□ -0.39
GPATCH4-216ENST00000531900 PFASO15067 1338 aa12.62□□□□□ -0.39
GPATCH4-216ENST00000531900 SYNGAP1Q96PV0 1343 aa12.62□□□□□ -0.39
GPATCH4-216ENST00000531900 MCM3APO60318 1980 aa12.61□□□□□ -0.39
GPATCH4-216ENST00000531900 LOC102724159A0A0B4J2E5 919 aa12.61□□□□□ -0.39
GPATCH4-216ENST00000531900 MSCO60682 206 aa12.61□□□□□ -0.39
GPATCH4-216ENST00000531900 DDAH1O94760 285 aa12.61□□□□□ -0.39
GPATCH4-216ENST00000531900 PGK2P07205 417 aa12.61□□□□□ -0.39
GPATCH4-216ENST00000531900 CCND3P30281 292 aaPredicted RBP12.61□□□□□ -0.39
GPATCH4-216ENST00000531900 CYP2C19P33261 490 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms