RNA–Protein interactions for RNA: ENST00000531625.1

UBXN1-212, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-212ENST00000531625 C6orf222P0C671 652 aaPredicted RBP22.71■■□□□ 1.23
UBXN1-212ENST00000531625 GRIN2CQ14957 1233 aa22.71■■□□□ 1.23
UBXN1-212ENST00000531625 CCDC174Q6PII3 467 aa22.71■■□□□ 1.23
UBXN1-212ENST00000531625 ANKRD35Q8N283 1001 aa22.71■■□□□ 1.23
UBXN1-212ENST00000531625 KIFC2Q96AC6 838 aa22.71■■□□□ 1.23
UBXN1-212ENST00000531625 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.71■■□□□ 1.23
UBXN1-212ENST00000531625 RAVER2Q9HCJ3 691 aaKnown RBP22.71■■□□□ 1.23
UBXN1-212ENST00000531625 MTMR4Q9NYA4 1195 aa22.71■■□□□ 1.23
UBXN1-212ENST00000531625 NCOR1O75376 2440 aa22.71■■□□□ 1.23
UBXN1-212ENST00000531625 CHD9Q3L8U1 2897 aa22.71■■□□□ 1.23
UBXN1-212ENST00000531625 MYH4Q9Y623 1939 aa22.7■■□□□ 1.23
UBXN1-212ENST00000531625 ADCY6O43306 1168 aa22.7■■□□□ 1.22
UBXN1-212ENST00000531625 ASGR1P07306 291 aa22.7■■□□□ 1.22
UBXN1-212ENST00000531625 GNAT2P19087 354 aa22.7■■□□□ 1.22
UBXN1-212ENST00000531625 NKX3-2P78367 333 aa22.7■■□□□ 1.22
UBXN1-212ENST00000531625 PPIGQ13427 754 aaKnown RBP eCLIP22.7■■□□□ 1.22
UBXN1-212ENST00000531625 CCDC144BQ3MJ40 725 aa22.7■■□□□ 1.22
UBXN1-212ENST00000531625 ZNF444Q8N0Y2 327 aaPredicted RBP22.7■■□□□ 1.22
UBXN1-212ENST00000531625 STK11IPQ8N1F8 1099 aa22.7■■□□□ 1.22
UBXN1-212ENST00000531625 GMCL1P1Q8NEA9 526 aa22.7■■□□□ 1.22
UBXN1-212ENST00000531625 SYMPKQ92797 1274 aaKnown RBP22.7■■□□□ 1.22
UBXN1-212ENST00000531625 CEP95Q96GE4 821 aa22.7■■□□□ 1.22
UBXN1-212ENST00000531625 EPB41L4AQ9HCS5 686 aaPredicted RBP22.7■■□□□ 1.22
UBXN1-212ENST00000531625 A0A0U1RQG5 324 aaPredicted RBP22.69■■□□□ 1.22
UBXN1-212ENST00000531625 ARVCFO00192 962 aa22.69■■□□□ 1.22
UBXN1-212ENST00000531625 RNF113AO15541 343 aaKnown RBP22.69■■□□□ 1.22
UBXN1-212ENST00000531625 TTLL1O95922 423 aa22.69■■□□□ 1.22
UBXN1-212ENST00000531625 ZFYP08048 801 aaPredicted RBP22.69■■□□□ 1.22
UBXN1-212ENST00000531625 FDX1P10109 184 aa22.69■■□□□ 1.22
UBXN1-212ENST00000531625 SLC4A3P48751 1232 aa22.69■■□□□ 1.22
UBXN1-212ENST00000531625 RASIP1Q5U651 963 aa22.69■■□□□ 1.22
UBXN1-212ENST00000531625 C16orf59Q7L2K0 433 aa22.69■■□□□ 1.22
UBXN1-212ENST00000531625 ARMCX2Q7L311 632 aa22.69■■□□□ 1.22
UBXN1-212ENST00000531625 TIFAQ96CG3 184 aa22.69■■□□□ 1.22
UBXN1-212ENST00000531625 ZNF576Q9H609 170 aa22.69■■□□□ 1.22
UBXN1-212ENST00000531625 GPAA1O43292 621 aa22.68■■□□□ 1.22
UBXN1-212ENST00000531625 IRX5P78411 483 aaPredicted RBP22.68■■□□□ 1.22
UBXN1-212ENST00000531625 GNASQ5JWF2 1037 aa22.68■■□□□ 1.22
UBXN1-212ENST00000531625 TMEM240Q5SV17 173 aa22.68■■□□□ 1.22
UBXN1-212ENST00000531625 KATNBL1Q9H079 304 aa22.68■■□□□ 1.22
UBXN1-212ENST00000531625 PLIN4Q96Q06 1357 aa22.67■■□□□ 1.22
UBXN1-212ENST00000531625 PRDM1O75626 825 aa22.67■■□□□ 1.22
UBXN1-212ENST00000531625 TDO2P48775 406 aa22.67■■□□□ 1.22
UBXN1-212ENST00000531625 TMEM199Q8N511 208 aa22.67■■□□□ 1.22
UBXN1-212ENST00000531625 VTI1AQ96AJ9 217 aa22.67■■□□□ 1.22
UBXN1-212ENST00000531625 GPATCH3Q96I76 525 aa22.67■■□□□ 1.22
UBXN1-212ENST00000531625 CTAGE5O15320 804 aa22.66■■□□□ 1.22
UBXN1-212ENST00000531625 BMP3P12645 472 aa22.66■■□□□ 1.22
UBXN1-212ENST00000531625 FAM126BQ8IXS8 530 aa22.66■■□□□ 1.22
UBXN1-212ENST00000531625 CCDC144CPQ8IYA2 1237 aa22.66■■□□□ 1.22
UBXN1-212ENST00000531625 FAM133AQ8N9E0 248 aa22.66■■□□□ 1.22
UBXN1-212ENST00000531625 NEDD1Q8NHV4 660 aa22.66■■□□□ 1.22
UBXN1-212ENST00000531625 PRDM6Q9NQX0 595 aa22.66■■□□□ 1.22
UBXN1-212ENST00000531625 PATL2C9JE40 543 aaKnown RBP22.65■■□□□ 1.22
UBXN1-212ENST00000531625 TLR3O15455 904 aaKnown RBP22.65■■□□□ 1.22
UBXN1-212ENST00000531625 CSF2RAP15509 400 aa22.65■■□□□ 1.22
UBXN1-212ENST00000531625 SLFN13Q68D06 897 aa22.65■■□□□ 1.22
UBXN1-212ENST00000531625 PSRC1Q6PGN9 363 aaPredicted RBP22.65■■□□□ 1.22
UBXN1-212ENST00000531625 LRRC47Q8N1G4 583 aaKnown RBP22.65■■□□□ 1.22
UBXN1-212ENST00000531625 USP38Q8NB14 1042 aa22.65■■□□□ 1.22
UBXN1-212ENST00000531625 ACAD9Q9H845 621 aa22.65■■□□□ 1.22
UBXN1-212ENST00000531625 CD4P01730 458 aa22.64■■□□□ 1.21
UBXN1-212ENST00000531625 APPP05067 770 aa22.64■■□□□ 1.21
UBXN1-212ENST00000531625 CNTN2Q02246 1040 aa22.64■■□□□ 1.21
UBXN1-212ENST00000531625 LRRFIP1Q32MZ4 808 aaKnown RBP22.64■■□□□ 1.21
UBXN1-212ENST00000531625 TJAP1Q5JTD0 557 aa22.64■■□□□ 1.21
UBXN1-212ENST00000531625 IFNL3Q8IZI9 196 aa22.64■■□□□ 1.21
UBXN1-212ENST00000531625 SLC43A3Q8NBI5 491 aa22.64■■□□□ 1.21
UBXN1-212ENST00000531625 PBX4Q9BYU1 374 aa22.64■■□□□ 1.21
UBXN1-212ENST00000531625 DCTPP1Q9H773 170 aa22.64■■□□□ 1.21
UBXN1-212ENST00000531625 CHD7Q9P2D1 2997 aa22.63■■□□□ 1.21
UBXN1-212ENST00000531625 TMEM232C9JQI7 657 aa22.63■■□□□ 1.21
UBXN1-212ENST00000531625 M0R2C6 588 aa22.63■■□□□ 1.21
UBXN1-212ENST00000531625 TSPY3P0CV98 308 aa22.63■■□□□ 1.21
UBXN1-212ENST00000531625 TSPY8P0CW00 308 aa22.63■■□□□ 1.21
UBXN1-212ENST00000531625 STAT2P52630 851 aa22.63■■□□□ 1.21
UBXN1-212ENST00000531625 PDE4BQ07343 736 aa22.63■■□□□ 1.21
UBXN1-212ENST00000531625 ZNF365Q70YC5 407 aa22.63■■□□□ 1.21
UBXN1-212ENST00000531625 FAM160B2Q86V87 743 aa22.63■■□□□ 1.21
UBXN1-212ENST00000531625 CHURC1Q8WUH1 139 aa22.63■■□□□ 1.21
UBXN1-212ENST00000531625 GMCL1Q96IK5 515 aa22.63■■□□□ 1.21
UBXN1-212ENST00000531625 NACAP1Q9BZK3 213 aa22.63■■□□□ 1.21
UBXN1-212ENST00000531625 A1CFQ9NQ94 594 aaKnown RBP22.63■■□□□ 1.21
UBXN1-212ENST00000531625 HOMER2Q9NSB8 354 aa22.63■■□□□ 1.21
UBXN1-212ENST00000531625 ASB14A6NK59 587 aa22.62■■□□□ 1.21
UBXN1-212ENST00000531625 PLA2G6O60733 806 aa22.62■■□□□ 1.21
UBXN1-212ENST00000531625 CABYRO75952 493 aa22.62■■□□□ 1.21
UBXN1-212ENST00000531625 TNFAIP2Q03169 654 aa22.62■■□□□ 1.21
UBXN1-212ENST00000531625 TKFCQ3LXA3 575 aa22.62■■□□□ 1.21
UBXN1-212ENST00000531625 CCDC129Q6ZRS4 1044 aa22.62■■□□□ 1.21
UBXN1-212ENST00000531625 SEZ6LQ9BYH1 1024 aa22.62■■□□□ 1.21
UBXN1-212ENST00000531625 PPP1R12CQ9BZL4 782 aa22.62■■□□□ 1.21
UBXN1-212ENST00000531625 GNEQ9Y223 722 aaKnown RBP22.62■■□□□ 1.21
UBXN1-212ENST00000531625 ASTN1O14525 1302 aa22.61■■□□□ 1.21
UBXN1-212ENST00000531625 ZNF536O15090 1300 aa22.61■■□□□ 1.21
UBXN1-212ENST00000531625 GRXCR1A8MXD5 290 aa22.61■■□□□ 1.21
UBXN1-212ENST00000531625 SLC3A2P08195 630 aaKnown RBP22.61■■□□□ 1.21
UBXN1-212ENST00000531625 ACRP10323 421 aa22.61■■□□□ 1.21
UBXN1-212ENST00000531625 PBX2P40425 430 aa22.61■■□□□ 1.21
UBXN1-212ENST00000531625 PPP4R3BQ5MIZ7 849 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms