RNA–Protein interactions for RNA: ENST00000531014.5

CTNND1-229, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-229ENST00000531014 CCDC15Q0P6D6 951 aa7.94□□□□□ -1.14
CTNND1-229ENST00000531014 HP1BP3Q5SSJ5 553 aaPredicted RBP7.94□□□□□ -1.14
CTNND1-229ENST00000531014 RC3H1Q5TC82 1133 aaKnown RBP7.94□□□□□ -1.14
CTNND1-229ENST00000531014 TLK2Q86UE8 772 aa7.94□□□□□ -1.14
CTNND1-229ENST00000531014 USP48Q86UV5 1035 aa7.94□□□□□ -1.14
CTNND1-229ENST00000531014 KLHL7Q8IXQ5 586 aa7.94□□□□□ -1.14
CTNND1-229ENST00000531014 PALM2Q8IXS6 379 aa7.94□□□□□ -1.14
CTNND1-229ENST00000531014 CCDC13Q8IYE1 715 aa7.94□□□□□ -1.14
CTNND1-229ENST00000531014 CCDC105Q8IYK2 499 aa7.94□□□□□ -1.14
CTNND1-229ENST00000531014 TMOD4Q9NZQ9 345 aa7.94□□□□□ -1.14
CTNND1-229ENST00000531014 HMG20BQ9P0W2 317 aa7.94□□□□□ -1.14
CTNND1-229ENST00000531014 DBF4Q9UBU7 674 aaPredicted RBP7.94□□□□□ -1.14
CTNND1-229ENST00000531014 CAPN9O14815 690 aa7.94□□□□□ -1.14
CTNND1-229ENST00000531014 NBNO60934 754 aa7.94□□□□□ -1.14
CTNND1-229ENST00000531014 MCF2P10911 925 aa7.94□□□□□ -1.14
CTNND1-229ENST00000531014 RFX1P22670 979 aa7.94□□□□□ -1.14
CTNND1-229ENST00000531014 PLCB4Q15147 1175 aa7.94□□□□□ -1.14
CTNND1-229ENST00000531014 NSMCE1Q8WV22 266 aa7.94□□□□□ -1.14
CTNND1-229ENST00000531014 TCP11Q8WWU5 503 aa7.94□□□□□ -1.14
CTNND1-229ENST00000531014 ZKSCAN3Q9BRR0 538 aa7.94□□□□□ -1.14
CTNND1-229ENST00000531014 SPINK5Q9NQ38 1064 aaPredicted RBP7.94□□□□□ -1.14
CTNND1-229ENST00000531014 FAM8A1Q9UBU6 413 aa7.94□□□□□ -1.14
CTNND1-229ENST00000531014 CCDC85CA6NKD9 419 aa7.94□□□□□ -1.14
CTNND1-229ENST00000531014 ALDH1A1P00352 501 aa7.94□□□□□ -1.14
CTNND1-229ENST00000531014 S100BP04271 92 aaPredicted RBP7.94□□□□□ -1.14
CTNND1-229ENST00000531014 RNASE9P60153 205 aaKnown RBP7.94□□□□□ -1.14
CTNND1-229ENST00000531014 CEP55Q53EZ4 464 aa7.94□□□□□ -1.14
CTNND1-229ENST00000531014 ARHGAP18Q8N392 663 aa7.94□□□□□ -1.14
CTNND1-229ENST00000531014 TSR2Q969E8 191 aaKnown RBP7.94□□□□□ -1.14
CTNND1-229ENST00000531014 TUBB6Q9BUF5 446 aa7.94□□□□□ -1.14
CTNND1-229ENST00000531014 BOLA2Q9H3K6 86 aa7.94□□□□□ -1.14
CTNND1-229ENST00000531014 SFMBT1Q9UHJ3 866 aa7.94□□□□□ -1.14
CTNND1-229ENST00000531014 EXOC6BQ9Y2D4 811 aa7.94□□□□□ -1.14
CTNND1-229ENST00000531014 NR2E3Q9Y5X4 410 aa7.94□□□□□ -1.14
CTNND1-229ENST00000531014 RAD50Q92878 1312 aa7.93□□□□□ -1.14
CTNND1-229ENST00000531014 RHOBTB1O94844 696 aa7.93□□□□□ -1.14
CTNND1-229ENST00000531014 BAG3O95817 575 aa7.93□□□□□ -1.14
CTNND1-229ENST00000531014 GPTP24298 496 aa7.93□□□□□ -1.14
CTNND1-229ENST00000531014 GUCY2CP25092 1073 aa7.93□□□□□ -1.14
CTNND1-229ENST00000531014 TMED10P49755 219 aaKnown RBP7.93□□□□□ -1.14
CTNND1-229ENST00000531014 APBA1Q02410 837 aa7.93□□□□□ -1.14
CTNND1-229ENST00000531014 E2F4Q16254 413 aa7.93□□□□□ -1.14
CTNND1-229ENST00000531014 MICU3Q86XE3 530 aa7.93□□□□□ -1.14
CTNND1-229ENST00000531014 SYCE1Q8N0S2 351 aa7.93□□□□□ -1.14
CTNND1-229ENST00000531014 ARMC2Q8NEN0 867 aa7.93□□□□□ -1.14
CTNND1-229ENST00000531014 CCHCR1Q8TD31 782 aa7.93□□□□□ -1.14
CTNND1-229ENST00000531014 LRRC8CQ8TDW0 803 aa7.93□□□□□ -1.14
CTNND1-229ENST00000531014 LTBP4Q8N2S1 1624 aa7.93□□□□□ -1.14
CTNND1-229ENST00000531014 EFCAB14O75071 495 aa7.93□□□□□ -1.14
CTNND1-229ENST00000531014 HLA-DPA1P20036 260 aa7.93□□□□□ -1.14
CTNND1-229ENST00000531014 STX1BP61266 288 aa7.93□□□□□ -1.14
CTNND1-229ENST00000531014 NMIQ13287 307 aaPredicted RBP7.93□□□□□ -1.14
CTNND1-229ENST00000531014 PHKBQ93100 1093 aa7.93□□□□□ -1.14
CTNND1-229ENST00000531014 RNF34Q969K3 372 aa7.93□□□□□ -1.14
CTNND1-229ENST00000531014 FGD4Q96M96 766 aa7.93□□□□□ -1.14
CTNND1-229ENST00000531014 ZSCAN32Q9NX65 697 aa7.93□□□□□ -1.14
CTNND1-229ENST00000531014 WARS2Q9UGM6 360 aaKnown RBP7.93□□□□□ -1.14
CTNND1-229ENST00000531014 CAPN11Q9UMQ6 739 aa7.93□□□□□ -1.14
CTNND1-229ENST00000531014 CNPY2Q9Y2B0 182 aa7.93□□□□□ -1.14
CTNND1-229ENST00000531014 MROH1Q8NDA8 1641 aa7.93□□□□□ -1.14
CTNND1-229ENST00000531014 KIDINS220Q9ULH0 1771 aa7.93□□□□□ -1.14
CTNND1-229ENST00000531014 CCT5P48643 541 aa7.93□□□□□ -1.14
CTNND1-229ENST00000531014 ARHGDIAP52565 204 aa7.93□□□□□ -1.14
CTNND1-229ENST00000531014 MYL5Q02045 173 aa7.93□□□□□ -1.14
CTNND1-229ENST00000531014 PPARDQ03181 441 aa7.93□□□□□ -1.14
CTNND1-229ENST00000531014 DLGAP5Q15398 846 aa7.93□□□□□ -1.14
CTNND1-229ENST00000531014 TMTC3Q6ZXV5 915 aa7.93□□□□□ -1.14
CTNND1-229ENST00000531014 DHX58Q96C10 678 aa7.93□□□□□ -1.14
CTNND1-229ENST00000531014 TLK1Q9UKI8 766 aa7.93□□□□□ -1.14
CTNND1-229ENST00000531014 SLC4A7Q9Y6M7 1214 aa7.93□□□□□ -1.14
CTNND1-229ENST00000531014 MYOM2P54296 1465 aa7.93□□□□□ -1.14
CTNND1-229ENST00000531014 ARHGAP6O43182 974 aa7.93□□□□□ -1.14
CTNND1-229ENST00000531014 HDAC4P56524 1084 aa7.93□□□□□ -1.14
CTNND1-229ENST00000531014 STX17P56962 302 aa7.93□□□□□ -1.14
CTNND1-229ENST00000531014 FAM133BQ5BKY9 247 aaKnown RBP7.93□□□□□ -1.14
CTNND1-229ENST00000531014 WDR44Q5JSH3 913 aa7.93□□□□□ -1.14
CTNND1-229ENST00000531014 KRT79Q5XKE5 535 aa7.93□□□□□ -1.14
CTNND1-229ENST00000531014 TRIM42Q8IWZ5 723 aa7.93□□□□□ -1.14
CTNND1-229ENST00000531014 KLHL29Q96CT2 875 aa7.93□□□□□ -1.14
CTNND1-229ENST00000531014 MTIF3Q9H2K0 278 aaKnown RBP7.93□□□□□ -1.14
CTNND1-229ENST00000531014 IFT122Q9HBG6 1241 aa7.93□□□□□ -1.14
CTNND1-229ENST00000531014 VAT1LQ9HCJ6 419 aa7.93□□□□□ -1.14
CTNND1-229ENST00000531014 CFAP65Q6ZU64 1925 aaKnown RBP7.92□□□□□ -1.14
CTNND1-229ENST00000531014 ARHGAP10A1A4S6 786 aa7.92□□□□□ -1.14
CTNND1-229ENST00000531014 BBOX1O75936 387 aa7.92□□□□□ -1.14
CTNND1-229ENST00000531014 FMNL1O95466 1100 aaPredicted RBP7.92□□□□□ -1.14
CTNND1-229ENST00000531014 PSMC1P62191 440 aaKnown RBP7.92□□□□□ -1.14
CTNND1-229ENST00000531014 PDE4BQ07343 736 aa7.92□□□□□ -1.14
CTNND1-229ENST00000531014 RNF207Q6ZRF8 634 aa7.92□□□□□ -1.14
CTNND1-229ENST00000531014 RINLQ6ZS11 566 aa7.92□□□□□ -1.14
CTNND1-229ENST00000531014 NCOA7Q8NI08 942 aa7.92□□□□□ -1.14
CTNND1-229ENST00000531014 CACTINQ8WUQ7 758 aaKnown RBP7.92□□□□□ -1.14
CTNND1-229ENST00000531014 NAP1L4Q99733 375 aaKnown RBP7.92□□□□□ -1.14
CTNND1-229ENST00000531014 YIPF3Q9GZM5 350 aa7.92□□□□□ -1.14
CTNND1-229ENST00000531014 ACTR5Q9H9F9 607 aaPredicted RBP7.92□□□□□ -1.14
CTNND1-229ENST00000531014 CASP2P42575 452 aa7.92□□□□□ -1.14
CTNND1-229ENST00000531014 PPP2R5EQ16537 467 aa7.92□□□□□ -1.14
CTNND1-229ENST00000531014 ICE2Q659A1 982 aa7.92□□□□□ -1.14
CTNND1-229ENST00000531014 IGSF22Q8N9C0 903 aa7.92□□□□□ -1.14
CTNND1-229ENST00000531014 HDAC11Q96DB2 347 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms