RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 GLT1D1Q96MS3 346 aa18.78■□□□□ 0.6
CHMP4A-204ENST00000530996 ACAD9Q9H845 621 aa18.78■□□□□ 0.6
CHMP4A-204ENST00000530996 STX8Q9UNK0 236 aa18.78■□□□□ 0.6
CHMP4A-204ENST00000530996 LAMA2P24043 3122 aaKnown RBP18.77■□□□□ 0.6
CHMP4A-204ENST00000530996 KIAA0355O15063 1070 aa18.77■□□□□ 0.6
CHMP4A-204ENST00000530996 CCDC144BQ3MJ40 725 aa18.77■□□□□ 0.6
CHMP4A-204ENST00000530996 PPP4R3BQ5MIZ7 849 aa18.77■□□□□ 0.6
CHMP4A-204ENST00000530996 CCDC174Q6PII3 467 aa18.77■□□□□ 0.6
CHMP4A-204ENST00000530996 FAM160B2Q86V87 743 aa18.77■□□□□ 0.6
CHMP4A-204ENST00000530996 PCSK9Q8NBP7 692 aaKnown RBP18.77■□□□□ 0.6
CHMP4A-204ENST00000530996 MAFAQ8NHW3 353 aaPredicted RBP18.77■□□□□ 0.6
CHMP4A-204ENST00000530996 PI4K2BQ8TCG2 481 aa18.77■□□□□ 0.6
CHMP4A-204ENST00000530996 MKL1Q969V6 931 aa18.77■□□□□ 0.6
CHMP4A-204ENST00000530996 CDX2Q99626 313 aaPredicted RBP18.77■□□□□ 0.6
CHMP4A-204ENST00000530996 ABHD16BQ9H3Z7 469 aa18.77■□□□□ 0.6
CHMP4A-204ENST00000530996 RNF146Q9NTX7 359 aa18.77■□□□□ 0.6
CHMP4A-204ENST00000530996 MROH7Q68CQ1 1323 aa18.76■□□□□ 0.59
CHMP4A-204ENST00000530996 MCCP23508 829 aa18.76■□□□□ 0.59
CHMP4A-204ENST00000530996 EPHB4P54760 987 aa18.76■□□□□ 0.59
CHMP4A-204ENST00000530996 FAAP100Q0VG06 881 aa18.76■□□□□ 0.59
CHMP4A-204ENST00000530996 CCDC96Q2M329 555 aa18.76■□□□□ 0.59
CHMP4A-204ENST00000530996 ZMYM1Q5SVZ6 1142 aa18.76■□□□□ 0.59
CHMP4A-204ENST00000530996 CCDC129Q6ZRS4 1044 aa18.76■□□□□ 0.59
CHMP4A-204ENST00000530996 CCDC144CPQ8IYA2 1237 aa18.76■□□□□ 0.59
CHMP4A-204ENST00000530996 CHURC1Q8WUH1 139 aa18.76■□□□□ 0.59
CHMP4A-204ENST00000530996 MYLIPQ8WY64 445 aa18.76■□□□□ 0.59
CHMP4A-204ENST00000530996 TOMM22Q9NS69 142 aa18.76■□□□□ 0.59
CHMP4A-204ENST00000530996 A0A0C4DFX4 3053 aa18.75■□□□□ 0.59
CHMP4A-204ENST00000530996 A0A0U1RQG5 324 aaPredicted RBP18.75■□□□□ 0.59
CHMP4A-204ENST00000530996 ADCY6O43306 1168 aa18.75■□□□□ 0.59
CHMP4A-204ENST00000530996 ASGR1P07306 291 aa18.75■□□□□ 0.59
CHMP4A-204ENST00000530996 FDX1P10109 184 aa18.75■□□□□ 0.59
CHMP4A-204ENST00000530996 ALAS1P13196 640 aa18.75■□□□□ 0.59
CHMP4A-204ENST00000530996 FOSL2P15408 326 aa18.75■□□□□ 0.59
CHMP4A-204ENST00000530996 CST5P28325 142 aaPredicted RBP18.75■□□□□ 0.59
CHMP4A-204ENST00000530996 IRX5P78411 483 aaPredicted RBP18.75■□□□□ 0.59
CHMP4A-204ENST00000530996 CNTN2Q02246 1040 aa18.75■□□□□ 0.59
CHMP4A-204ENST00000530996 CTDSPL2Q05D32 466 aa18.75■□□□□ 0.59
CHMP4A-204ENST00000530996 GNASQ5JWF2 1037 aa18.75■□□□□ 0.59
CHMP4A-204ENST00000530996 KCTD1Q719H9 257 aa18.75■□□□□ 0.59
CHMP4A-204ENST00000530996 ANKRD33Q7Z3H0 272 aa18.75■□□□□ 0.59
CHMP4A-204ENST00000530996 KLHDC9Q8NEP7 349 aa18.75■□□□□ 0.59
CHMP4A-204ENST00000530996 GMCL1Q96IK5 515 aa18.75■□□□□ 0.59
CHMP4A-204ENST00000530996 FGD4Q96M96 766 aa18.75■□□□□ 0.59
CHMP4A-204ENST00000530996 AGBL1Q96MI9 1066 aa18.75■□□□□ 0.59
CHMP4A-204ENST00000530996 SEMA6BQ9H3T3 888 aa18.75■□□□□ 0.59
CHMP4A-204ENST00000530996 RANBP6O60518 1105 aaKnown RBP18.74■□□□□ 0.59
CHMP4A-204ENST00000530996 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.74■□□□□ 0.59
CHMP4A-204ENST00000530996 TOX2Q96NM4 488 aa18.74■□□□□ 0.59
CHMP4A-204ENST00000530996 TTYH1Q9H313 450 aaPredicted RBP18.74■□□□□ 0.59
CHMP4A-204ENST00000530996 A1CFQ9NQ94 594 aaKnown RBP18.74■□□□□ 0.59
CHMP4A-204ENST00000530996 PCDHB15Q9Y5E8 787 aa18.74■□□□□ 0.59
CHMP4A-204ENST00000530996 MYH4Q9Y623 1939 aa18.74■□□□□ 0.59
CHMP4A-204ENST00000530996 ELP1O95163 1332 aa18.74■□□□□ 0.59
CHMP4A-204ENST00000530996 TLR3O15455 904 aaKnown RBP18.73■□□□□ 0.59
CHMP4A-204ENST00000530996 SNAP25P60880 206 aa18.73■□□□□ 0.59
CHMP4A-204ENST00000530996 RASGRP2Q7LDG7 609 aa18.73■□□□□ 0.59
CHMP4A-204ENST00000530996 STAG1Q8WVM7 1258 aa18.73■□□□□ 0.59
CHMP4A-204ENST00000530996 TRERF1Q96PN7 1200 aa18.73■□□□□ 0.59
CHMP4A-204ENST00000530996 PPP1R12CQ9BZL4 782 aa18.73■□□□□ 0.59
CHMP4A-204ENST00000530996 UPF3AQ9H1J1 476 aaKnown RBP18.73■□□□□ 0.59
CHMP4A-204ENST00000530996 ASB14A6NK59 587 aa18.72■□□□□ 0.59
CHMP4A-204ENST00000530996 NMT2O60551 498 aa18.72■□□□□ 0.59
CHMP4A-204ENST00000530996 DNAJB2P25686 324 aa18.72■□□□□ 0.59
CHMP4A-204ENST00000530996 GJA9P57773 515 aa18.72■□□□□ 0.59
CHMP4A-204ENST00000530996 BEX3Q00994 111 aa18.72■□□□□ 0.59
CHMP4A-204ENST00000530996 TNFAIP2Q03169 654 aa18.72■□□□□ 0.59
CHMP4A-204ENST00000530996 PPIGQ13427 754 aaKnown RBP eCLIP18.72■□□□□ 0.596e-8■■□□□ 12.9
CHMP4A-204ENST00000530996 TKFCQ3LXA3 575 aa18.72■□□□□ 0.59
CHMP4A-204ENST00000530996 CCSAPQ6IQ19 270 aaPredicted RBP18.72■□□□□ 0.59
CHMP4A-204ENST00000530996 NSMFQ6X4W1 530 aa18.72■□□□□ 0.59
CHMP4A-204ENST00000530996 TLK2Q86UE8 772 aa18.72■□□□□ 0.59
CHMP4A-204ENST00000530996 TBX21Q9UL17 535 aa18.72■□□□□ 0.59
CHMP4A-204ENST00000530996 CCPG1Q9ULG6 757 aa18.72■□□□□ 0.59
CHMP4A-204ENST00000530996 ZNFX1Q9P2E3 1918 aaKnown RBP18.72■□□□□ 0.59
CHMP4A-204ENST00000530996 UNC80Q8N2C7 3258 aa18.71■□□□□ 0.59
CHMP4A-204ENST00000530996 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.71■□□□□ 0.59
CHMP4A-204ENST00000530996 ARVCFO00192 962 aa18.71■□□□□ 0.59
CHMP4A-204ENST00000530996 TIMP1P01033 207 aa18.71■□□□□ 0.59
CHMP4A-204ENST00000530996 RRP12Q5JTH9 1297 aaKnown RBP18.71■□□□□ 0.59
CHMP4A-204ENST00000530996 COL25A1Q9BXS0 654 aaPredicted RBP18.71■□□□□ 0.59
CHMP4A-204ENST00000530996 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.71■□□□□ 0.59
CHMP4A-204ENST00000530996 TMEM265A0A087WTH1 108 aa18.7■□□□□ 0.58
CHMP4A-204ENST00000530996 ANKRD45Q5TZF3 282 aa18.7■□□□□ 0.58
CHMP4A-204ENST00000530996 EEPD1Q7L9B9 569 aa18.7■□□□□ 0.58
CHMP4A-204ENST00000530996 FBXO16Q8IX29 292 aaPredicted RBP18.7■□□□□ 0.58
CHMP4A-204ENST00000530996 TMEM199Q8N511 208 aa18.7■□□□□ 0.58
CHMP4A-204ENST00000530996 FAM133AQ8N9E0 248 aa18.7■□□□□ 0.58
CHMP4A-204ENST00000530996 AP5M1Q9H0R1 490 aa18.7■□□□□ 0.58
CHMP4A-204ENST00000530996 INCENPQ9NQS7 918 aa18.7■□□□□ 0.58
CHMP4A-204ENST00000530996 PRR12Q9ULL5 1215 aa18.7■□□□□ 0.58
CHMP4A-204ENST00000530996 DDX49Q9Y6V7 483 aaKnown RBP18.7■□□□□ 0.58
CHMP4A-204ENST00000530996 CUL9Q8IWT3 2517 aa18.7■□□□□ 0.58
CHMP4A-204ENST00000530996 ZNF536O15090 1300 aa18.7■□□□□ 0.58
CHMP4A-204ENST00000530996 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.69■□□□□ 0.58
CHMP4A-204ENST00000530996 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.69■□□□□ 0.58
CHMP4A-204ENST00000530996 SOWAHBA6NEL2 793 aa18.69■□□□□ 0.58
CHMP4A-204ENST00000530996 RRP1P56182 461 aaKnown RBP18.69■□□□□ 0.58
CHMP4A-204ENST00000530996 MUM1L1Q5H9M0 696 aa18.69■□□□□ 0.58
CHMP4A-204ENST00000530996 VPS53Q5VIR6 699 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms