RNA–Protein interactions for RNA: ENST00000530875.5

NXF1-207, Transcript of nuclear RNA export factor 1, humanhuman

TSL 1 (best)

Gene NXF1, Length 1,922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-207ENST00000530875 RANBP17Q9H2T7 1088 aaKnown RBP16.04■□□□□ 0.16
NXF1-207ENST00000530875 ZSCAN16Q9H4T2 348 aaPredicted RBP16.04■□□□□ 0.16
NXF1-207ENST00000530875 NPY5RQ15761 445 aa16.04■□□□□ 0.16
NXF1-207ENST00000530875 CCDC174Q6PII3 467 aa16.04■□□□□ 0.16
NXF1-207ENST00000530875 WNK4Q96J92 1243 aa16.04■□□□□ 0.16
NXF1-207ENST00000530875 PPP1R9AQ9ULJ8 1098 aa16.04■□□□□ 0.16
NXF1-207ENST00000530875 ADAMTS3O15072 1205 aa16.03■□□□□ 0.16
NXF1-207ENST00000530875 TOMM70O94826 608 aa16.03■□□□□ 0.16
NXF1-207ENST00000530875 TAL1P17542 331 aaPredicted RBP16.03■□□□□ 0.16
NXF1-207ENST00000530875 KRT2P35908 639 aa16.03■□□□□ 0.16
NXF1-207ENST00000530875 MKRN3Q13064 507 aaKnown RBP16.03■□□□□ 0.16
NXF1-207ENST00000530875 NR5A1Q13285 461 aa16.03■□□□□ 0.16
NXF1-207ENST00000530875 CATSPERGQ6ZRH7 1159 aa16.03■□□□□ 0.16
NXF1-207ENST00000530875 FBXO11Q86XK2 927 aa16.03■□□□□ 0.16
NXF1-207ENST00000530875 CCDC12Q8WUD4 166 aaPredicted RBP16.03■□□□□ 0.16
NXF1-207ENST00000530875 AMNQ9BXJ7 453 aa16.03■□□□□ 0.16
NXF1-207ENST00000530875 PCDHA1Q9Y5I3 950 aa16.03■□□□□ 0.16
NXF1-207ENST00000530875 ATP6V1DQ9Y5K8 247 aa16.03■□□□□ 0.16
NXF1-207ENST00000530875 SMCO2A6NFE2 343 aa16.02■□□□□ 0.16
NXF1-207ENST00000530875 USP17L15C9J2P7 530 aa16.02■□□□□ 0.16
NXF1-207ENST00000530875 USP17L13C9JLJ4 530 aa16.02■□□□□ 0.16
NXF1-207ENST00000530875 USP17L11C9JVI0 530 aa16.02■□□□□ 0.16
NXF1-207ENST00000530875 USP17L18D6R9N7 530 aa16.02■□□□□ 0.16
NXF1-207ENST00000530875 USP17L22D6RA61 530 aa16.02■□□□□ 0.16
NXF1-207ENST00000530875 USP17L17D6RBQ6 530 aa16.02■□□□□ 0.16
NXF1-207ENST00000530875 USP17L19D6RCP7 530 aa16.02■□□□□ 0.16
NXF1-207ENST00000530875 USP17L20D6RJB6 530 aa16.02■□□□□ 0.16
NXF1-207ENST00000530875 U2AF2P26368 475 aaKnown RBP eCLIP16.02■□□□□ 0.165e-10■■■□□ 17.1
NXF1-207ENST00000530875 CALML3P27482 149 aa16.02■□□□□ 0.16
NXF1-207ENST00000530875 USP17L24Q0WX57 530 aa16.02■□□□□ 0.16
NXF1-207ENST00000530875 SNAPC2Q13487 334 aa16.02■□□□□ 0.16
NXF1-207ENST00000530875 USH1GQ495M9 461 aa16.02■□□□□ 0.16
NXF1-207ENST00000530875 L1TD1Q5T7N2 865 aaKnown RBP16.02■□□□□ 0.16
NXF1-207ENST00000530875 PROCA1Q8NCQ7 364 aaPredicted RBP16.02■□□□□ 0.16
NXF1-207ENST00000530875 ZMYND12Q9H0C1 365 aa16.02■□□□□ 0.16
NXF1-207ENST00000530875 BRMS1Q9HCU9 246 aa16.02■□□□□ 0.16
NXF1-207ENST00000530875 TRPM7Q96QT4 1865 aa16.02■□□□□ 0.16
NXF1-207ENST00000530875 PTPRFP10586 1907 aa16.02■□□□□ 0.15
NXF1-207ENST00000530875 DNM1Q05193 864 aaKnown RBP16.02■□□□□ 0.15
NXF1-207ENST00000530875 MOGSQ13724 837 aa16.02■□□□□ 0.15
NXF1-207ENST00000530875 COG2Q14746 738 aa16.02■□□□□ 0.15
NXF1-207ENST00000530875 SAPCD2Q86UD0 394 aa16.02■□□□□ 0.15
NXF1-207ENST00000530875 ZNF784Q8NCA9 323 aaPredicted RBP16.02■□□□□ 0.15
NXF1-207ENST00000530875 ATG4CQ96DT6 458 aa16.02■□□□□ 0.15
NXF1-207ENST00000530875 FOXP1Q9H334 677 aaPredicted RBP16.02■□□□□ 0.15
NXF1-207ENST00000530875 PCDHA4Q9UN74 947 aa16.02■□□□□ 0.15
NXF1-207ENST00000530875 DSG3P32926 999 aa16.01■□□□□ 0.15
NXF1-207ENST00000530875 SPRYD7Q5W111 196 aa16.01■□□□□ 0.15
NXF1-207ENST00000530875 PPP1R18Q6NYC8 613 aa16.01■□□□□ 0.15
NXF1-207ENST00000530875 BRAPQ7Z569 592 aa16.01■□□□□ 0.15
NXF1-207ENST00000530875 NOSTRINQ8IVI9 506 aa16.01■□□□□ 0.15
NXF1-207ENST00000530875 BLIDQ8IZY5 108 aa16.01■□□□□ 0.15
NXF1-207ENST00000530875 FAM177A1Q8N128 213 aaPredicted RBP16.01■□□□□ 0.15
NXF1-207ENST00000530875 SLC38A10Q9HBR0 1119 aa16.01■□□□□ 0.15
NXF1-207ENST00000530875 C6orf50Q9HD87 102 aa16.01■□□□□ 0.15
NXF1-207ENST00000530875 LOC285556D6RIA3 1793 aa16■□□□□ 0.15
NXF1-207ENST00000530875 ESYT2A0FGR8 921 aa16■□□□□ 0.15
NXF1-207ENST00000530875 GOLGA6L3A6NEY3 463 aa16■□□□□ 0.15
NXF1-207ENST00000530875 VWA5AO00534 786 aa16■□□□□ 0.15
NXF1-207ENST00000530875 GALNT17Q6IS24 598 aa16■□□□□ 0.15
NXF1-207ENST00000530875 FASTKD5Q7L8L6 764 aaKnown RBP16■□□□□ 0.15
NXF1-207ENST00000530875 AGTPBP1Q9UPW5 1226 aa16■□□□□ 0.15
NXF1-207ENST00000530875 ZNF536O15090 1300 aa16■□□□□ 0.15
NXF1-207ENST00000530875 NCLP19338 710 aaKnown RBP16■□□□□ 0.15
NXF1-207ENST00000530875 GNA11P29992 359 aa16■□□□□ 0.15
NXF1-207ENST00000530875 HOXA7P31268 230 aaPredicted RBP16■□□□□ 0.15
NXF1-207ENST00000530875 ADCY7P51828 1080 aa16■□□□□ 0.15
NXF1-207ENST00000530875 CPXCR1Q8N123 301 aa16■□□□□ 0.15
NXF1-207ENST00000530875 DAGLBQ8NCG7 672 aa16■□□□□ 0.15
NXF1-207ENST00000530875 RASGRP4Q8TDF6 673 aa16■□□□□ 0.15
NXF1-207ENST00000530875 TNFRSF25Q93038 417 aa16■□□□□ 0.15
NXF1-207ENST00000530875 CTDP1Q9Y5B0 961 aaPredicted RBP16■□□□□ 0.15
NXF1-207ENST00000530875 FSD2A1L4K1 749 aa15.99■□□□□ 0.15
NXF1-207ENST00000530875 ZBED4O75132 1171 aa15.99■□□□□ 0.15
NXF1-207ENST00000530875 ICAM1P05362 532 aa15.99■□□□□ 0.15
NXF1-207ENST00000530875 ZBTB48P10074 688 aaPredicted RBP15.99■□□□□ 0.15
NXF1-207ENST00000530875 ZNF157P51786 506 aaPredicted RBP15.99■□□□□ 0.15
NXF1-207ENST00000530875 GTF2A2P52657 109 aa15.99■□□□□ 0.15
NXF1-207ENST00000530875 NOM1Q5C9Z4 860 aaKnown RBP15.99■□□□□ 0.15
NXF1-207ENST00000530875 EARS2Q5JPH6 523 aaKnown RBP15.99■□□□□ 0.15
NXF1-207ENST00000530875 MYSM1Q5VVJ2 828 aa15.99■□□□□ 0.15
NXF1-207ENST00000530875 GPAT2Q6NUI2 795 aa15.99■□□□□ 0.15
NXF1-207ENST00000530875 MS4A4AQ96JQ5 239 aa15.99■□□□□ 0.15
NXF1-207ENST00000530875 AGBL1Q96MI9 1066 aa15.99■□□□□ 0.15
NXF1-207ENST00000530875 RAVER2Q9HCJ3 691 aaKnown RBP15.99■□□□□ 0.15
NXF1-207ENST00000530875 HOXC10Q9NYD6 342 aa15.99■□□□□ 0.15
NXF1-207ENST00000530875 TFIP11Q9UBB9 837 aaKnown RBP15.99■□□□□ 0.15
NXF1-207ENST00000530875 CNPY2Q9Y2B0 182 aa15.99■□□□□ 0.15
NXF1-207ENST00000530875 FAM205CA6NFA0 338 aa15.98■□□□□ 0.15
NXF1-207ENST00000530875 SPDYE16A6NNV3 312 aaPredicted RBP15.98■□□□□ 0.15
NXF1-207ENST00000530875 M0R2N6 131 aa15.98■□□□□ 0.15
NXF1-207ENST00000530875 CETPP11597 493 aa15.98■□□□□ 0.15
NXF1-207ENST00000530875 RASAL3Q86YV0 1011 aa15.98■□□□□ 0.15
NXF1-207ENST00000530875 PSTPIP2Q9H939 334 aa15.98■□□□□ 0.15
NXF1-207ENST00000530875 RIC8AQ9NPQ8 531 aa15.98■□□□□ 0.15
NXF1-207ENST00000530875 CCPG1Q9ULG6 757 aa15.98■□□□□ 0.15
NXF1-207ENST00000530875 PCDHA6Q9UN73 950 aa15.98■□□□□ 0.15
NXF1-207ENST00000530875 ADAMTS5Q9UNA0 930 aa15.98■□□□□ 0.15
NXF1-207ENST00000530875 PCDHA8Q9Y5H6 950 aa15.98■□□□□ 0.15
NXF1-207ENST00000530875 TLL2Q9Y6L7 1015 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms