RNA–Protein interactions for RNA: ENST00000530628.2

CDKN2A-210, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDKN2A, Length 748 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-210ENST00000530628 TOX2Q96NM4 488 aa26.14■■□□□ 1.78
CDKN2A-210ENST00000530628 SPC25Q9HBM1 224 aa26.14■■□□□ 1.78
CDKN2A-210ENST00000530628 HOMER2Q9NSB8 354 aa26.14■■□□□ 1.78
CDKN2A-210ENST00000530628 DCDC2CA8MYV0 355 aa26.13■■□□□ 1.77
CDKN2A-210ENST00000530628 SLC1A4P43007 532 aa26.13■■□□□ 1.77
CDKN2A-210ENST00000530628 ANKRD33Q7Z3H0 272 aa26.13■■□□□ 1.77
CDKN2A-210ENST00000530628 STAG1Q8WVM7 1258 aa26.13■■□□□ 1.77
CDKN2A-210ENST00000530628 TSPY2A6NKD2 308 aa26.12■■□□□ 1.77
CDKN2A-210ENST00000530628 C6orf222P0C671 652 aaPredicted RBP26.12■■□□□ 1.77
CDKN2A-210ENST00000530628 SMAD3P84022 425 aaKnown RBP26.12■■□□□ 1.77
CDKN2A-210ENST00000530628 CCDC144BQ3MJ40 725 aa26.12■■□□□ 1.77
CDKN2A-210ENST00000530628 CCSAPQ6IQ19 270 aaPredicted RBP26.12■■□□□ 1.77
CDKN2A-210ENST00000530628 ARMCX2Q7L311 632 aa26.12■■□□□ 1.77
CDKN2A-210ENST00000530628 PCSK9Q8NBP7 692 aaKnown RBP26.12■■□□□ 1.77
CDKN2A-210ENST00000530628 GMCL1Q96IK5 515 aa26.12■■□□□ 1.77
CDKN2A-210ENST00000530628 FGD4Q96M96 766 aa26.12■■□□□ 1.77
CDKN2A-210ENST00000530628 GLT1D1Q96MS3 346 aa26.12■■□□□ 1.77
CDKN2A-210ENST00000530628 ACAD9Q9H845 621 aa26.12■■□□□ 1.77
CDKN2A-210ENST00000530628 STX8Q9UNK0 236 aa26.12■■□□□ 1.77
CDKN2A-210ENST00000530628 MCCP23508 829 aa26.11■■□□□ 1.77
CDKN2A-210ENST00000530628 CST5P28325 142 aaPredicted RBP26.11■■□□□ 1.77
CDKN2A-210ENST00000530628 FAAP100Q0VG06 881 aa26.11■■□□□ 1.77
CDKN2A-210ENST00000530628 CHMP4CQ96CF2 233 aa26.11■■□□□ 1.77
CDKN2A-210ENST00000530628 MYADML2A6NDP7 307 aa26.1■■□□□ 1.77
CDKN2A-210ENST00000530628 FPGSQ05932 587 aa26.1■■□□□ 1.77
CDKN2A-210ENST00000530628 CTDSPL2Q05D32 466 aa26.1■■□□□ 1.77
CDKN2A-210ENST00000530628 CCDC129Q6ZRS4 1044 aa26.1■■□□□ 1.77
CDKN2A-210ENST00000530628 CCDC144CPQ8IYA2 1237 aa26.1■■□□□ 1.77
CDKN2A-210ENST00000530628 VTI1AQ96AJ9 217 aa26.1■■□□□ 1.77
CDKN2A-210ENST00000530628 RNPC3Q96LT9 517 aaKnown RBP26.1■■□□□ 1.77
CDKN2A-210ENST00000530628 AGBL1Q96MI9 1066 aa26.1■■□□□ 1.77
CDKN2A-210ENST00000530628 SEMA6BQ9H3T3 888 aa26.1■■□□□ 1.77
CDKN2A-210ENST00000530628 ELP1O95163 1332 aa26.1■■□□□ 1.77
CDKN2A-210ENST00000530628 ASGR1P07306 291 aa26.09■■□□□ 1.77
CDKN2A-210ENST00000530628 GJA9P57773 515 aa26.09■■□□□ 1.77
CDKN2A-210ENST00000530628 CNTN2Q02246 1040 aa26.09■■□□□ 1.77
CDKN2A-210ENST00000530628 TKFCQ3LXA3 575 aa26.09■■□□□ 1.77
CDKN2A-210ENST00000530628 RCSD1Q6JBY9 416 aa26.09■■□□□ 1.77
CDKN2A-210ENST00000530628 UPF3AQ9H1J1 476 aaKnown RBP26.09■■□□□ 1.77
CDKN2A-210ENST00000530628 RNF146Q9NTX7 359 aa26.09■■□□□ 1.77
CDKN2A-210ENST00000530628 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.09■■□□□ 1.77
CDKN2A-210ENST00000530628 MROH7Q68CQ1 1323 aa26.09■■□□□ 1.77
CDKN2A-210ENST00000530628 ADCY6O43306 1168 aa26.08■■□□□ 1.77
CDKN2A-210ENST00000530628 PLA2G6O60733 806 aa26.08■■□□□ 1.77
CDKN2A-210ENST00000530628 EPHB4P54760 987 aa26.08■■□□□ 1.77
CDKN2A-210ENST00000530628 GNASQ5JWF2 1037 aa26.08■■□□□ 1.77
CDKN2A-210ENST00000530628 ANKRD45Q5TZF3 282 aa26.08■■□□□ 1.77
CDKN2A-210ENST00000530628 CDX2Q99626 313 aaPredicted RBP26.08■■□□□ 1.77
CDKN2A-210ENST00000530628 INCENPQ9NQS7 918 aa26.08■■□□□ 1.77
CDKN2A-210ENST00000530628 ZNF536O15090 1300 aa26.08■■□□□ 1.77
CDKN2A-210ENST00000530628 ASB14A6NK59 587 aa26.07■■□□□ 1.76
CDKN2A-210ENST00000530628 RANBP6O60518 1105 aaKnown RBP26.07■■□□□ 1.76
CDKN2A-210ENST00000530628 ALAS1P13196 640 aa26.07■■□□□ 1.76
CDKN2A-210ENST00000530628 IRX5P78411 483 aaPredicted RBP26.07■■□□□ 1.76
CDKN2A-210ENST00000530628 KCTD1Q719H9 257 aa26.07■■□□□ 1.76
CDKN2A-210ENST00000530628 FAM133AQ8N9E0 248 aa26.07■■□□□ 1.76
CDKN2A-210ENST00000530628 EVI5LQ96CN4 794 aa26.07■■□□□ 1.76
CDKN2A-210ENST00000530628 TRERF1Q96PN7 1200 aa26.07■■□□□ 1.76
CDKN2A-210ENST00000530628 A1CFQ9NQ94 594 aaKnown RBP26.07■■□□□ 1.76
CDKN2A-210ENST00000530628 IL17RBQ9NRM6 502 aa26.07■■□□□ 1.76
CDKN2A-210ENST00000530628 SALL3Q9BXA9 1300 aa26.07■■□□□ 1.76
CDKN2A-210ENST00000530628 LAMA2P24043 3122 aaKnown RBP26.07■■□□□ 1.76
CDKN2A-210ENST00000530628 FOXP2O15409 715 aa26.06■■□□□ 1.76
CDKN2A-210ENST00000530628 TIMP1P01033 207 aa26.06■■□□□ 1.76
CDKN2A-210ENST00000530628 CCDC174Q6PII3 467 aa26.06■■□□□ 1.76
CDKN2A-210ENST00000530628 PHF6Q8IWS0 365 aaKnown RBP eCLIP26.06■■□□□ 1.76
CDKN2A-210ENST00000530628 KATNBL1Q9H079 304 aa26.06■■□□□ 1.76
CDKN2A-210ENST00000530628 A0A0U1RQG5 324 aaPredicted RBP26.05■■□□□ 1.76
CDKN2A-210ENST00000530628 NMT2O60551 498 aa26.05■■□□□ 1.76
CDKN2A-210ENST00000530628 CDK7P50613 346 aa26.05■■□□□ 1.76
CDKN2A-210ENST00000530628 NOL8Q76FK4 1167 aaKnown RBP26.05■■□□□ 1.76
CDKN2A-210ENST00000530628 HELLSQ9NRZ9 838 aa26.05■■□□□ 1.76
CDKN2A-210ENST00000530628 ANAPC4Q9UJX5 808 aa26.05■■□□□ 1.76
CDKN2A-210ENST00000530628 PRR12Q9ULL5 1215 aa26.05■■□□□ 1.76
CDKN2A-210ENST00000530628 MTMR7Q9Y216 660 aa26.05■■□□□ 1.76
CDKN2A-210ENST00000530628 SOWAHBA6NEL2 793 aa26.04■■□□□ 1.76
CDKN2A-210ENST00000530628 ARVCFO00192 962 aa26.04■■□□□ 1.76
CDKN2A-210ENST00000530628 RRP1P56182 461 aaKnown RBP26.04■■□□□ 1.76
CDKN2A-210ENST00000530628 TNFAIP2Q03169 654 aa26.04■■□□□ 1.76
CDKN2A-210ENST00000530628 VPS53Q5VIR6 699 aa26.04■■□□□ 1.76
CDKN2A-210ENST00000530628 TTYH1Q9H313 450 aaPredicted RBP26.04■■□□□ 1.76
CDKN2A-210ENST00000530628 TBX21Q9UL17 535 aa26.04■■□□□ 1.76
CDKN2A-210ENST00000530628 TLR3O15455 904 aaKnown RBP26.03■■□□□ 1.76
CDKN2A-210ENST00000530628 SNAP25P60880 206 aa26.03■■□□□ 1.76
CDKN2A-210ENST00000530628 TOMM22Q9NS69 142 aa26.03■■□□□ 1.76
CDKN2A-210ENST00000530628 HSFX4A0A1B0GTS1 333 aaPredicted RBP26.02■■□□□ 1.76
CDKN2A-210ENST00000530628 C11orf97A0A1B0GVM6 126 aaPredicted RBP26.02■■□□□ 1.76
CDKN2A-210ENST00000530628 HSFX3A0A1B0GWH4 333 aaPredicted RBP26.02■■□□□ 1.76
CDKN2A-210ENST00000530628 ORC4O43929 436 aa26.02■■□□□ 1.76
CDKN2A-210ENST00000530628 NKX3-2P78367 333 aa26.02■■□□□ 1.76
CDKN2A-210ENST00000530628 ALX1Q15699 326 aa26.02■■□□□ 1.76
CDKN2A-210ENST00000530628 CCDC96Q2M329 555 aa26.02■■□□□ 1.76
CDKN2A-210ENST00000530628 MFSD5Q6N075 450 aa26.02■■□□□ 1.76
CDKN2A-210ENST00000530628 TMEM265A0A087WTH1 108 aa26.01■■□□□ 1.75
CDKN2A-210ENST00000530628 BEX3Q00994 111 aa26.01■■□□□ 1.75
CDKN2A-210ENST00000530628 PPIGQ13427 754 aaKnown RBP eCLIP26.01■■□□□ 1.75
CDKN2A-210ENST00000530628 MUM1L1Q5H9M0 696 aa26.01■■□□□ 1.75
CDKN2A-210ENST00000530628 DCAF4Q8WV16 495 aa26.01■■□□□ 1.75
CDKN2A-210ENST00000530628 MYLIPQ8WY64 445 aa26.01■■□□□ 1.75
CDKN2A-210ENST00000530628 CCPG1Q9ULG6 757 aa26.01■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms