RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 AKT1S1Q96B36 256 aa13.05□□□□□ -0.32
USP35-207ENST00000530546 PAGE5Q96GU1 130 aa13.05□□□□□ -0.32
USP35-207ENST00000530546 PPP1R13BQ96KQ4 1090 aa13.05□□□□□ -0.32
USP35-207ENST00000530546 BLZF1Q9H2G9 400 aa13.05□□□□□ -0.32
USP35-207ENST00000530546 SNED1Q8TER0 1413 aa13.05□□□□□ -0.32
USP35-207ENST00000530546 USP17L5A8MUK1 530 aa13.05□□□□□ -0.32
USP35-207ENST00000530546 NRDCO43847 1150 aa13.05□□□□□ -0.32
USP35-207ENST00000530546 OAS2P29728 719 aaKnown RBP13.05□□□□□ -0.32
USP35-207ENST00000530546 NAPAP54920 295 aa13.05□□□□□ -0.32
USP35-207ENST00000530546 STX17P56962 302 aa13.05□□□□□ -0.32
USP35-207ENST00000530546 MORC3Q14149 939 aa13.05□□□□□ -0.32
USP35-207ENST00000530546 TMC4Q7Z404 712 aa13.05□□□□□ -0.32
USP35-207ENST00000530546 SMYD4Q8IYR2 804 aaPredicted RBP13.05□□□□□ -0.32
USP35-207ENST00000530546 MYCBPQ99417 103 aaPredicted RBP13.05□□□□□ -0.32
USP35-207ENST00000530546 RRP15Q9Y3B9 282 aaKnown RBP13.05□□□□□ -0.32
USP35-207ENST00000530546 NFE2L3Q9Y4A8 694 aa13.05□□□□□ -0.32
USP35-207ENST00000530546 EFCAB8A8MWE9 144 aa13.04□□□□□ -0.32
USP35-207ENST00000530546 TMEM232C9JQI7 657 aa13.04□□□□□ -0.32
USP35-207ENST00000530546 TRIM66O15016 1216 aa13.04□□□□□ -0.32
USP35-207ENST00000530546 IVLP07476 585 aa13.04□□□□□ -0.32
USP35-207ENST00000530546 GUCY2CP25092 1073 aa13.04□□□□□ -0.32
USP35-207ENST00000530546 SARSP49591 514 aaKnown RBP13.04□□□□□ -0.32
USP35-207ENST00000530546 ATP2B2Q01814 1243 aa13.04□□□□□ -0.32
USP35-207ENST00000530546 NAV1Q8NEY1 1877 aa13.04□□□□□ -0.32
USP35-207ENST00000530546 CCDC34Q96HJ3 373 aa13.04□□□□□ -0.32
USP35-207ENST00000530546 NCAPGQ9BPX3 1015 aa13.04□□□□□ -0.32
USP35-207ENST00000530546 PCDHA6Q9UN73 950 aa13.04□□□□□ -0.32
USP35-207ENST00000530546 PCDHA8Q9Y5H6 950 aa13.04□□□□□ -0.32
USP35-207ENST00000530546 STXBP3O00186 592 aa13.04□□□□□ -0.32
USP35-207ENST00000530546 COBLO75128 1261 aa13.04□□□□□ -0.32
USP35-207ENST00000530546 AKR1B1P15121 316 aa13.04□□□□□ -0.32
USP35-207ENST00000530546 ALDH1B1P30837 517 aa13.04□□□□□ -0.32
USP35-207ENST00000530546 PDE6BP35913 854 aa13.04□□□□□ -0.32
USP35-207ENST00000530546 GOLGA8FQ08AF8 430 aa13.04□□□□□ -0.32
USP35-207ENST00000530546 GOLGA8DPQ0D2H9 430 aa13.04□□□□□ -0.32
USP35-207ENST00000530546 E4F1Q66K89 784 aaPredicted RBP13.04□□□□□ -0.32
USP35-207ENST00000530546 TOP1P11387 765 aaKnown RBP13.03□□□□□ -0.32
USP35-207ENST00000530546 TRAPPC10P48553 1259 aa13.03□□□□□ -0.32
USP35-207ENST00000530546 CACNB3P54284 484 aa13.03□□□□□ -0.32
USP35-207ENST00000530546 SMC1AQ14683 1233 aaKnown RBP13.03□□□□□ -0.32
USP35-207ENST00000530546 ARMCX5Q6P1M9 558 aa13.03□□□□□ -0.32
USP35-207ENST00000530546 ELOA2Q8IYF1 753 aaPredicted RBP13.03□□□□□ -0.32
USP35-207ENST00000530546 MLKLQ8NB16 471 aa13.03□□□□□ -0.32
USP35-207ENST00000530546 CCDC148Q8NFR7 591 aa13.03□□□□□ -0.32
USP35-207ENST00000530546 RASSF8Q8NHQ8 419 aa13.03□□□□□ -0.32
USP35-207ENST00000530546 PIGSQ96S52 555 aa13.03□□□□□ -0.32
USP35-207ENST00000530546 PLIN2Q99541 437 aa13.03□□□□□ -0.32
USP35-207ENST00000530546 BARHL2Q9NY43 387 aa13.03□□□□□ -0.32
USP35-207ENST00000530546 LCMT1Q9UIC8 334 aa13.03□□□□□ -0.32
USP35-207ENST00000530546 SFPQP23246 707 aaKnown RBP eCLIP13.03□□□□□ -0.32
USP35-207ENST00000530546 C2CD5Q86YS7 1000 aa13.03□□□□□ -0.32
USP35-207ENST00000530546 KIAA0825Q8IV33 1275 aa13.03□□□□□ -0.32
USP35-207ENST00000530546 MNS1Q8NEH6 495 aa13.03□□□□□ -0.32
USP35-207ENST00000530546 CNKSR2Q8WXI2 1034 aa13.03□□□□□ -0.32
USP35-207ENST00000530546 GPCPD1Q9NPB8 672 aa13.03□□□□□ -0.32
USP35-207ENST00000530546 SH3GLB2Q9NR46 395 aa13.03□□□□□ -0.32
USP35-207ENST00000530546 DACH1Q9UI36 760 aa13.03□□□□□ -0.32
USP35-207ENST00000530546 PCDHAC2Q9Y5I4 1007 aa13.03□□□□□ -0.32
USP35-207ENST00000530546 PP2D1A8MPX8 630 aa13.02□□□□□ -0.32
USP35-207ENST00000530546 MPHOSPH10O00566 681 aaKnown RBP13.02□□□□□ -0.32
USP35-207ENST00000530546 TBC1D8O95759 1140 aa13.02□□□□□ -0.32
USP35-207ENST00000530546 NT5DC1Q5TFE4 455 aa13.02□□□□□ -0.32
USP35-207ENST00000530546 LRRN4CLQ8ND94 238 aa13.02□□□□□ -0.32
USP35-207ENST00000530546 MASTLQ96GX5 879 aa13.02□□□□□ -0.32
USP35-207ENST00000530546 TMEM60Q9H2L4 133 aa13.02□□□□□ -0.32
USP35-207ENST00000530546 SAMSN1Q9NSI8 373 aaKnown RBP13.02□□□□□ -0.32
USP35-207ENST00000530546 CBFA2T2O43439 604 aa13.02□□□□□ -0.33
USP35-207ENST00000530546 RAD21O60216 631 aa13.02□□□□□ -0.33
USP35-207ENST00000530546 TADA3O75528 432 aa13.02□□□□□ -0.33
USP35-207ENST00000530546 ACTN2P35609 894 aa13.02□□□□□ -0.33
USP35-207ENST00000530546 RBM5P52756 815 aaKnown RBP eCLIP13.02□□□□□ -0.33
USP35-207ENST00000530546 RRP36Q96EU6 259 aaKnown RBP13.02□□□□□ -0.33
USP35-207ENST00000530546 SEC63Q9UGP8 760 aaKnown RBP13.02□□□□□ -0.33
USP35-207ENST00000530546 SMCO2A6NFE2 343 aa13.02□□□□□ -0.33
USP35-207ENST00000530546 PLSCR1O15162 318 aa13.02□□□□□ -0.33
USP35-207ENST00000530546 NT5C2P49902 561 aa13.02□□□□□ -0.33
USP35-207ENST00000530546 ETF1P62495 437 aaKnown RBP13.02□□□□□ -0.33
USP35-207ENST00000530546 TCP10Q12799 353 aa13.02□□□□□ -0.33
USP35-207ENST00000530546 NFIAQ12857 509 aa13.02□□□□□ -0.33
USP35-207ENST00000530546 KARSQ15046 597 aaKnown RBP13.02□□□□□ -0.33
USP35-207ENST00000530546 MED15Q96RN5 788 aa13.02□□□□□ -0.33
USP35-207ENST00000530546 LZTS2Q9BRK4 669 aa13.02□□□□□ -0.33
USP35-207ENST00000530546 GOLGB1Q14789 3259 aaKnown RBP13.01□□□□□ -0.33
USP35-207ENST00000530546 CD44P16070 742 aaKnown RBP13.01□□□□□ -0.33
USP35-207ENST00000530546 CHRNA5P30532 468 aa13.01□□□□□ -0.33
USP35-207ENST00000530546 MAGEA9P43362 315 aa13.01□□□□□ -0.33
USP35-207ENST00000530546 PSEN1P49768 467 aa13.01□□□□□ -0.33
USP35-207ENST00000530546 LETM2Q2VYF4 491 aa13.01□□□□□ -0.33
USP35-207ENST00000530546 TTC31Q49AM3 519 aaPredicted RBP13.01□□□□□ -0.33
USP35-207ENST00000530546 SOGA3Q5TF21 947 aa13.01□□□□□ -0.33
USP35-207ENST00000530546 CDC42EP5Q6NZY7 148 aa13.01□□□□□ -0.33
USP35-207ENST00000530546 CC2D1AQ6P1N0 951 aaPredicted RBP13.01□□□□□ -0.33
USP35-207ENST00000530546 REXO1L1PQ8IX06 675 aa13.01□□□□□ -0.33
USP35-207ENST00000530546 DNAI1Q9UI46 699 aa13.01□□□□□ -0.33
USP35-207ENST00000530546 JRKLQ9Y4A0 524 aa13.01□□□□□ -0.33
USP35-207ENST00000530546 FAM196BA6NMK8 535 aa13.01□□□□□ -0.33
USP35-207ENST00000530546 DPYDQ12882 1025 aa13.01□□□□□ -0.33
USP35-207ENST00000530546 JAKMIP3Q5VZ66 844 aa13.01□□□□□ -0.33
USP35-207ENST00000530546 DTHD1Q6ZMT9 781 aa13.01□□□□□ -0.33
USP35-207ENST00000530546 SH3RF1Q7Z6J0 888 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms