RNA–Protein interactions for RNA: ENST00000529608.1

TGFBR3-208, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 5

Gene TGFBR3, Length 785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-208ENST00000529608 ROBO3Q96MS0 1386 aa10.27□□□□□ -0.76
TGFBR3-208ENST00000529608 MYH4Q9Y623 1939 aa10.27□□□□□ -0.76
TGFBR3-208ENST00000529608 USP17L12C9JPN9 530 aa10.27□□□□□ -0.77
TGFBR3-208ENST00000529608 USP17L21D6R901 530 aa10.27□□□□□ -0.77
TGFBR3-208ENST00000529608 VWA5AO00534 786 aa10.27□□□□□ -0.77
TGFBR3-208ENST00000529608 PQBP1O60828 265 aaKnown RBP10.27□□□□□ -0.77
TGFBR3-208ENST00000529608 SNAI1O95863 264 aaPredicted RBP10.27□□□□□ -0.77
TGFBR3-208ENST00000529608 RARBP10826 455 aa10.27□□□□□ -0.77
TGFBR3-208ENST00000529608 ADD2P35612 726 aa10.27□□□□□ -0.77
TGFBR3-208ENST00000529608 TTF1Q15361 905 aaPredicted RBP10.27□□□□□ -0.77
TGFBR3-208ENST00000529608 CCSAPQ6IQ19 270 aaPredicted RBP10.27□□□□□ -0.77
TGFBR3-208ENST00000529608 TMED8Q6PL24 325 aaPredicted RBP10.27□□□□□ -0.77
TGFBR3-208ENST00000529608 C16orf59Q7L2K0 433 aa10.27□□□□□ -0.77
TGFBR3-208ENST00000529608 FTSJ3Q8IY81 847 aaKnown RBP10.27□□□□□ -0.77
TGFBR3-208ENST00000529608 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.27□□□□□ -0.77
TGFBR3-208ENST00000529608 RNPC3Q96LT9 517 aaKnown RBP10.27□□□□□ -0.77
TGFBR3-208ENST00000529608 NUP88Q99567 741 aaPredicted RBP10.27□□□□□ -0.77
TGFBR3-208ENST00000529608 BCL11AQ9H165 835 aa10.27□□□□□ -0.77
TGFBR3-208ENST00000529608 ARHGEF10LQ9HCE6 1279 aa10.27□□□□□ -0.77
TGFBR3-208ENST00000529608 SWAP70Q9UH65 585 aa10.27□□□□□ -0.77
TGFBR3-208ENST00000529608 TACC3Q9Y6A5 838 aa10.27□□□□□ -0.77
TGFBR3-208ENST00000529608 MUC3AQ02505 3323 aa10.27□□□□□ -0.77
TGFBR3-208ENST00000529608 SYNRGQ9UMZ2 1314 aa10.27□□□□□ -0.77
TGFBR3-208ENST00000529608 GRXCR1A8MXD5 290 aa10.26□□□□□ -0.77
TGFBR3-208ENST00000529608 SLC25A27O95847 323 aa10.26□□□□□ -0.77
TGFBR3-208ENST00000529608 RAG1P15918 1043 aa10.26□□□□□ -0.77
TGFBR3-208ENST00000529608 PBX2P40425 430 aa10.26□□□□□ -0.77
TGFBR3-208ENST00000529608 STAT3P40763 770 aa10.26□□□□□ -0.77
TGFBR3-208ENST00000529608 FAM83BQ5T0W9 1011 aa10.26□□□□□ -0.77
TGFBR3-208ENST00000529608 C16orf86Q6ZW13 317 aa10.26□□□□□ -0.77
TGFBR3-208ENST00000529608 ERC1Q8IUD2 1116 aa10.26□□□□□ -0.77
TGFBR3-208ENST00000529608 KLHDC9Q8NEP7 349 aa10.26□□□□□ -0.77
TGFBR3-208ENST00000529608 FGD4Q96M96 766 aa10.26□□□□□ -0.77
TGFBR3-208ENST00000529608 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.26□□□□□ -0.772e-6■□□□□ 8.1
TGFBR3-208ENST00000529608 BOLA2Q9H3K6 86 aa10.26□□□□□ -0.77
TGFBR3-208ENST00000529608 SLC5A4Q9NY91 659 aa10.26□□□□□ -0.77
TGFBR3-208ENST00000529608 PPP1R9AQ9ULJ8 1098 aa10.26□□□□□ -0.77
TGFBR3-208ENST00000529608 LRRC37A2A6NM11 1700 aa10.26□□□□□ -0.77
TGFBR3-208ENST00000529608 DNAJB2P25686 324 aa10.25□□□□□ -0.77
TGFBR3-208ENST00000529608 ACLYP53396 1101 aa10.25□□□□□ -0.77
TGFBR3-208ENST00000529608 FPGSQ05932 587 aa10.25□□□□□ -0.77
TGFBR3-208ENST00000529608 KCTD2Q14681 263 aa10.25□□□□□ -0.77
TGFBR3-208ENST00000529608 CTR9Q6PD62 1173 aa10.25□□□□□ -0.77
TGFBR3-208ENST00000529608 ANKRD33Q7Z3H0 272 aa10.25□□□□□ -0.77
TGFBR3-208ENST00000529608 RNF180Q86T96 592 aa10.25□□□□□ -0.77
TGFBR3-208ENST00000529608 PUS7LQ9H0K6 701 aaKnown RBP10.25□□□□□ -0.77
TGFBR3-208ENST00000529608 ATP8A2Q9NTI2 1148 aa10.25□□□□□ -0.77
TGFBR3-208ENST00000529608 TMEM39AQ9NV64 488 aa10.25□□□□□ -0.77
TGFBR3-208ENST00000529608 PAG1Q9NWQ8 432 aa10.25□□□□□ -0.77
TGFBR3-208ENST00000529608 NRBP1Q9UHY1 535 aa10.25□□□□□ -0.77
TGFBR3-208ENST00000529608 TBX21Q9UL17 535 aa10.25□□□□□ -0.77
TGFBR3-208ENST00000529608 DIS3Q9Y2L1 958 aaKnown RBP10.25□□□□□ -0.77
TGFBR3-208ENST00000529608 DNAJC25-GNG10A0A024R161 153 aa10.24□□□□□ -0.77
TGFBR3-208ENST00000529608 AKR1A1P14550 325 aa10.24□□□□□ -0.77
TGFBR3-208ENST00000529608 PTGS1P23219 599 aa10.24□□□□□ -0.77
TGFBR3-208ENST00000529608 CDK7P50613 346 aa10.24□□□□□ -0.77
TGFBR3-208ENST00000529608 FOSBP53539 338 aa10.24□□□□□ -0.77
TGFBR3-208ENST00000529608 KCNA10Q16322 511 aa10.24□□□□□ -0.77
TGFBR3-208ENST00000529608 PPP4R3BQ5MIZ7 849 aa10.24□□□□□ -0.77
TGFBR3-208ENST00000529608 STK11IPQ8N1F8 1099 aa10.24□□□□□ -0.77
TGFBR3-208ENST00000529608 CCDC17Q96LX7 622 aa10.24□□□□□ -0.77
TGFBR3-208ENST00000529608 STARD7Q9NQZ5 370 aa10.24□□□□□ -0.77
TGFBR3-208ENST00000529608 ARIH1Q9Y4X5 557 aaPredicted RBP10.24□□□□□ -0.77
TGFBR3-208ENST00000529608 LCTP09848 1927 aa10.24□□□□□ -0.77
TGFBR3-208ENST00000529608 REV3LO60673 3130 aa10.23□□□□□ -0.77
TGFBR3-208ENST00000529608 CHD9Q3L8U1 2897 aa10.23□□□□□ -0.77
TGFBR3-208ENST00000529608 TMEM265A0A087WTH1 108 aa10.23□□□□□ -0.77
TGFBR3-208ENST00000529608 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.23□□□□□ -0.77
TGFBR3-208ENST00000529608 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.23□□□□□ -0.77
TGFBR3-208ENST00000529608 CTAGE5O15320 804 aa10.23□□□□□ -0.77
TGFBR3-208ENST00000529608 RAD21O60216 631 aa10.23□□□□□ -0.77
TGFBR3-208ENST00000529608 TIMP1P01033 207 aa10.23□□□□□ -0.77
TGFBR3-208ENST00000529608 IFIT2P09913 472 aaKnown RBP10.23□□□□□ -0.77
TGFBR3-208ENST00000529608 ATP5JP18859 108 aa10.23□□□□□ -0.77
TGFBR3-208ENST00000529608 RASA1P20936 1047 aa10.23□□□□□ -0.77
TGFBR3-208ENST00000529608 TMEM240Q5SV17 173 aa10.23□□□□□ -0.77
TGFBR3-208ENST00000529608 RASIP1Q5U651 963 aa10.23□□□□□ -0.77
TGFBR3-208ENST00000529608 SNRNP48Q6IEG0 339 aaKnown RBP10.23□□□□□ -0.77
TGFBR3-208ENST00000529608 MAMDC4Q6UXC1 1216 aa10.23□□□□□ -0.77
TGFBR3-208ENST00000529608 CLASRPQ8N2M8 674 aaKnown RBP10.23□□□□□ -0.77
TGFBR3-208ENST00000529608 KIF1BPQ96EK5 621 aa10.23□□□□□ -0.77
TGFBR3-208ENST00000529608 TOX2Q96NM4 488 aa10.23□□□□□ -0.77
TGFBR3-208ENST00000529608 TSEN34Q9BSV6 310 aaKnown RBP10.23□□□□□ -0.77
TGFBR3-208ENST00000529608 PBX4Q9BYU1 374 aa10.23□□□□□ -0.77
TGFBR3-208ENST00000529608 KATNBL1Q9H079 304 aa10.23□□□□□ -0.77
TGFBR3-208ENST00000529608 ZNF576Q9H609 170 aa10.23□□□□□ -0.77
TGFBR3-208ENST00000529608 SH2D4AQ9H788 454 aa10.23□□□□□ -0.77
TGFBR3-208ENST00000529608 KANSL2Q9H9L4 492 aa10.23□□□□□ -0.77
TGFBR3-208ENST00000529608 RAPGEFL1Q9UHV5 662 aa10.23□□□□□ -0.77
TGFBR3-208ENST00000529608 SLC4A4Q9Y6R1 1079 aa10.23□□□□□ -0.77
TGFBR3-208ENST00000529608 DDX49Q9Y6V7 483 aaKnown RBP10.23□□□□□ -0.77
TGFBR3-208ENST00000529608 F5H6K3 240 aa10.22□□□□□ -0.77
TGFBR3-208ENST00000529608 NDUFB10O96000 172 aa10.22□□□□□ -0.77
TGFBR3-208ENST00000529608 ASGR1P07306 291 aa10.22□□□□□ -0.77
TGFBR3-208ENST00000529608 ACRP10323 421 aa10.22□□□□□ -0.77
TGFBR3-208ENST00000529608 CSF2RAP15509 400 aa10.22□□□□□ -0.77
TGFBR3-208ENST00000529608 SLC4A3P48751 1232 aa10.22□□□□□ -0.77
TGFBR3-208ENST00000529608 KLRC3Q07444 240 aa10.22□□□□□ -0.77
TGFBR3-208ENST00000529608 ADGRE1Q14246 886 aa10.22□□□□□ -0.77
TGFBR3-208ENST00000529608 HSP90AB4PQ58FF6 505 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms