RNA–Protein interactions for RNA: ENST00000529577.5

SF3B2-207, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 606 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-207ENST00000529577 CDX2Q99626 313 aaPredicted RBP24.4■■□□□ 1.5
SF3B2-207ENST00000529577 TSEN34Q9BSV6 310 aaKnown RBP24.4■■□□□ 1.5
SF3B2-207ENST00000529577 CNPY2Q9Y2B0 182 aa24.4■■□□□ 1.5
SF3B2-207ENST00000529577 SOWAHBA6NEL2 793 aa24.39■■□□□ 1.49
SF3B2-207ENST00000529577 ZBED4O75132 1171 aa24.39■■□□□ 1.49
SF3B2-207ENST00000529577 BMP3P12645 472 aa24.39■■□□□ 1.49
SF3B2-207ENST00000529577 CTDSPL2Q05D32 466 aa24.39■■□□□ 1.49
SF3B2-207ENST00000529577 TMEM63BQ5T3F8 832 aa24.39■■□□□ 1.49
SF3B2-207ENST00000529577 GPATCH3Q96I76 525 aa24.39■■□□□ 1.49
SF3B2-207ENST00000529577 UPF3AQ9H1J1 476 aaKnown RBP24.39■■□□□ 1.49
SF3B2-207ENST00000529577 FAM184BQ9ULE4 1060 aa24.39■■□□□ 1.49
SF3B2-207ENST00000529577 SYNPO2Q9UMS6 1093 aa24.39■■□□□ 1.49
SF3B2-207ENST00000529577 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.38■■□□□ 1.49
SF3B2-207ENST00000529577 CDK7P50613 346 aa24.38■■□□□ 1.49
SF3B2-207ENST00000529577 CCDC144BQ3MJ40 725 aa24.38■■□□□ 1.49
SF3B2-207ENST00000529577 ARMCX2Q7L311 632 aa24.38■■□□□ 1.49
SF3B2-207ENST00000529577 FAM133AQ8N9E0 248 aa24.38■■□□□ 1.49
SF3B2-207ENST00000529577 TMEM232C9JQI7 657 aa24.37■■□□□ 1.49
SF3B2-207ENST00000529577 DUSP11O75319 330 aaKnown RBP24.37■■□□□ 1.49
SF3B2-207ENST00000529577 CST5P28325 142 aaPredicted RBP24.37■■□□□ 1.49
SF3B2-207ENST00000529577 NOVP48745 357 aa24.37■■□□□ 1.49
SF3B2-207ENST00000529577 ZNF697Q5TEC3 545 aa24.37■■□□□ 1.49
SF3B2-207ENST00000529577 C16orf59Q7L2K0 433 aa24.37■■□□□ 1.49
SF3B2-207ENST00000529577 CCDC144CPQ8IYA2 1237 aa24.37■■□□□ 1.49
SF3B2-207ENST00000529577 FSD1Q9BTV5 496 aa24.37■■□□□ 1.49
SF3B2-207ENST00000529577 COL25A1Q9BXS0 654 aaPredicted RBP24.37■■□□□ 1.49
SF3B2-207ENST00000529577 A1CFQ9NQ94 594 aaKnown RBP24.37■■□□□ 1.49
SF3B2-207ENST00000529577 HOMER2Q9NSB8 354 aa24.37■■□□□ 1.49
SF3B2-207ENST00000529577 TBX21Q9UL17 535 aa24.37■■□□□ 1.49
SF3B2-207ENST00000529577 CHD9Q3L8U1 2897 aa24.36■■□□□ 1.49
SF3B2-207ENST00000529577 TSPY3P0CV98 308 aa24.36■■□□□ 1.49
SF3B2-207ENST00000529577 TSPY8P0CW00 308 aa24.36■■□□□ 1.49
SF3B2-207ENST00000529577 MCCP23508 829 aa24.36■■□□□ 1.49
SF3B2-207ENST00000529577 OAZ1P54368 228 aa24.36■■□□□ 1.49
SF3B2-207ENST00000529577 GJA9P57773 515 aa24.36■■□□□ 1.49
SF3B2-207ENST00000529577 SMAD3P84022 425 aaKnown RBP24.36■■□□□ 1.49
SF3B2-207ENST00000529577 ANKRD35Q8N283 1001 aa24.36■■□□□ 1.49
SF3B2-207ENST00000529577 CHST13Q8NET6 341 aa24.36■■□□□ 1.49
SF3B2-207ENST00000529577 GMCL1Q96IK5 515 aa24.36■■□□□ 1.49
SF3B2-207ENST00000529577 TOX2Q96NM4 488 aa24.36■■□□□ 1.49
SF3B2-207ENST00000529577 PURBQ96QR8 312 aaKnown RBP24.36■■□□□ 1.49
SF3B2-207ENST00000529577 STARD7Q9NQZ5 370 aa24.36■■□□□ 1.49
SF3B2-207ENST00000529577 ASGR1P07306 291 aa24.35■■□□□ 1.49
SF3B2-207ENST00000529577 MX1P20591 662 aa24.35■■□□□ 1.49
SF3B2-207ENST00000529577 MUM1L1Q5H9M0 696 aa24.35■■□□□ 1.49
SF3B2-207ENST00000529577 KCTD1Q719H9 257 aa24.35■■□□□ 1.49
SF3B2-207ENST00000529577 MYLIPQ8WY64 445 aa24.35■■□□□ 1.49
SF3B2-207ENST00000529577 NAPBQ9H115 298 aa24.35■■□□□ 1.49
SF3B2-207ENST00000529577 TMEM39AQ9NV64 488 aa24.35■■□□□ 1.49
SF3B2-207ENST00000529577 MOXD2PA6NHM9 499 aa24.34■■□□□ 1.49
SF3B2-207ENST00000529577 NKX3-2P78367 333 aa24.34■■□□□ 1.49
SF3B2-207ENST00000529577 PHF6Q8IWS0 365 aaKnown RBP eCLIP24.34■■□□□ 1.49
SF3B2-207ENST00000529577 STAG1Q8WVM7 1258 aa24.34■■□□□ 1.49
SF3B2-207ENST00000529577 ABHD16BQ9H3Z7 469 aa24.34■■□□□ 1.49
SF3B2-207ENST00000529577 C6orf222P0C671 652 aaPredicted RBP24.33■■□□□ 1.49
SF3B2-207ENST00000529577 RAG1P15918 1043 aa24.33■■□□□ 1.49
SF3B2-207ENST00000529577 BEX3Q00994 111 aa24.33■■□□□ 1.49
SF3B2-207ENST00000529577 RNF146Q9NTX7 359 aa24.33■■□□□ 1.49
SF3B2-207ENST00000529577 PDE4BQ07343 736 aa24.32■■□□□ 1.48
SF3B2-207ENST00000529577 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.32■■□□□ 1.48
SF3B2-207ENST00000529577 ZNF287Q9HBT7 754 aa24.32■■□□□ 1.48
SF3B2-207ENST00000529577 PDGFCQ9NRA1 345 aa24.32■■□□□ 1.48
SF3B2-207ENST00000529577 FBXO40Q9UH90 709 aa24.32■■□□□ 1.48
SF3B2-207ENST00000529577 ANAPC4Q9UJX5 808 aa24.32■■□□□ 1.48
SF3B2-207ENST00000529577 PRR12Q9ULL5 1215 aa24.32■■□□□ 1.48
SF3B2-207ENST00000529577 GNEQ9Y223 722 aaKnown RBP24.32■■□□□ 1.48
SF3B2-207ENST00000529577 GRIN2DO15399 1336 aa24.32■■□□□ 1.48
SF3B2-207ENST00000529577 ERC2O15083 957 aa24.31■■□□□ 1.48
SF3B2-207ENST00000529577 TIMP1P01033 207 aa24.31■■□□□ 1.48
SF3B2-207ENST00000529577 FGRP09769 529 aa24.31■■□□□ 1.48
SF3B2-207ENST00000529577 STAT2P52630 851 aa24.31■■□□□ 1.48
SF3B2-207ENST00000529577 FPGSQ05932 587 aa24.31■■□□□ 1.48
SF3B2-207ENST00000529577 TTBK2Q6IQ55 1244 aa24.31■■□□□ 1.48
SF3B2-207ENST00000529577 FAM126BQ8IXS8 530 aa24.31■■□□□ 1.48
SF3B2-207ENST00000529577 RNPC3Q96LT9 517 aaKnown RBP24.31■■□□□ 1.48
SF3B2-207ENST00000529577 NACAP1Q9BZK3 213 aa24.31■■□□□ 1.48
SF3B2-207ENST00000529577 ACAD9Q9H845 621 aa24.31■■□□□ 1.48
SF3B2-207ENST00000529577 ELP1O95163 1332 aa24.31■■□□□ 1.48
SF3B2-207ENST00000529577 PLA2G6O60733 806 aa24.3■■□□□ 1.48
SF3B2-207ENST00000529577 SLC1A4P43007 532 aa24.3■■□□□ 1.48
SF3B2-207ENST00000529577 RCSD1Q6JBY9 416 aa24.3■■□□□ 1.48
SF3B2-207ENST00000529577 TAPT1Q6NXT6 567 aa24.3■■□□□ 1.48
SF3B2-207ENST00000529577 CCDC174Q6PII3 467 aa24.3■■□□□ 1.48
SF3B2-207ENST00000529577 NUP133Q8WUM0 1156 aa24.3■■□□□ 1.48
SF3B2-207ENST00000529577 FAM227BQ96M60 508 aa24.3■■□□□ 1.48
SF3B2-207ENST00000529577 TRERF1Q96PN7 1200 aa24.3■■□□□ 1.48
SF3B2-207ENST00000529577 CRBNQ96SW2 442 aa24.3■■□□□ 1.48
SF3B2-207ENST00000529577 A0A0D9SFI3 127 aa24.29■■□□□ 1.48
SF3B2-207ENST00000529577 ARVCFO00192 962 aa24.29■■□□□ 1.48
SF3B2-207ENST00000529577 RRP1P56182 461 aaKnown RBP24.29■■□□□ 1.48
SF3B2-207ENST00000529577 RASIP1Q5U651 963 aa24.29■■□□□ 1.48
SF3B2-207ENST00000529577 FAM160B2Q86V87 743 aa24.29■■□□□ 1.48
SF3B2-207ENST00000529577 SLC43A3Q8NBI5 491 aa24.29■■□□□ 1.48
SF3B2-207ENST00000529577 CYP39A1Q9NYL5 469 aa24.29■■□□□ 1.48
SF3B2-207ENST00000529577 STX8Q9UNK0 236 aa24.29■■□□□ 1.48
SF3B2-207ENST00000529577 GRXCR1A8MXD5 290 aa24.28■■□□□ 1.48
SF3B2-207ENST00000529577 DCDC2CA8MYV0 355 aa24.28■■□□□ 1.48
SF3B2-207ENST00000529577 CD4P01730 458 aa24.28■■□□□ 1.48
SF3B2-207ENST00000529577 ALAS1P13196 640 aa24.28■■□□□ 1.48
SF3B2-207ENST00000529577 SMPD1P17405 629 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms