RNA–Protein interactions for RNA: ENST00000529558.1

AMBRA1-208, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 5

Gene AMBRA1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-208ENST00000529558 FUBP3Q96I24 572 aaKnown RBP eCLIP4.57□□□□□ -1.68
AMBRA1-208ENST00000529558 FANCD2OSQ96PS1 177 aa4.57□□□□□ -1.68
AMBRA1-208ENST00000529558 SARGQ9BW04 601 aa4.57□□□□□ -1.68
AMBRA1-208ENST00000529558 NKX2-4Q9H2Z4 354 aa4.57□□□□□ -1.68
AMBRA1-208ENST00000529558 PRDM11Q9NQV5 511 aa4.57□□□□□ -1.68
AMBRA1-208ENST00000529558 CYP26B1Q9NR63 512 aa4.57□□□□□ -1.68
AMBRA1-208ENST00000529558 SAMD15Q9P1V8 674 aa4.57□□□□□ -1.68
AMBRA1-208ENST00000529558 CEP131Q9UPN4 1083 aa4.57□□□□□ -1.68
AMBRA1-208ENST00000529558 ANKRD6Q9Y2G4 727 aa4.57□□□□□ -1.68
AMBRA1-208ENST00000529558 TRAF6Q9Y4K3 522 aa4.57□□□□□ -1.68
AMBRA1-208ENST00000529558 PCDHA9Q9Y5H5 950 aa4.57□□□□□ -1.68
AMBRA1-208ENST00000529558 ZNF891A8MT65 544 aaPredicted RBP4.56□□□□□ -1.68
AMBRA1-208ENST00000529558 CBX4O00257 560 aa4.56□□□□□ -1.68
AMBRA1-208ENST00000529558 LILRB5O75023 590 aa4.56□□□□□ -1.68
AMBRA1-208ENST00000529558 PPFIA3O75145 1194 aa4.56□□□□□ -1.68
AMBRA1-208ENST00000529558 FKBP9O95302 570 aa4.56□□□□□ -1.68
AMBRA1-208ENST00000529558 CPP00450 1065 aa4.56□□□□□ -1.68
AMBRA1-208ENST00000529558 SNRPB2P08579 225 aaKnown RBP4.56□□□□□ -1.68
AMBRA1-208ENST00000529558 CT47B1P0C2W7 299 aaPredicted RBP4.56□□□□□ -1.68
AMBRA1-208ENST00000529558 NAT1P18440 290 aa4.56□□□□□ -1.68
AMBRA1-208ENST00000529558 CCND1P24385 295 aa4.56□□□□□ -1.68
AMBRA1-208ENST00000529558 PDE6BP35913 854 aa4.56□□□□□ -1.68
AMBRA1-208ENST00000529558 ADCYAP1R1P41586 468 aa4.56□□□□□ -1.68
AMBRA1-208ENST00000529558 MAP2K3P46734 347 aa4.56□□□□□ -1.68
AMBRA1-208ENST00000529558 KCNJ6P48051 423 aa4.56□□□□□ -1.68
AMBRA1-208ENST00000529558 IL2P60568 153 aa4.56□□□□□ -1.68
AMBRA1-208ENST00000529558 ERVK-21P61565 698 aa4.56□□□□□ -1.68
AMBRA1-208ENST00000529558 DSG1Q02413 1049 aa4.56□□□□□ -1.68
AMBRA1-208ENST00000529558 ABCB5Q2M3G0 1257 aa4.56□□□□□ -1.68
AMBRA1-208ENST00000529558 MINDY4Q4G0A6 757 aa4.56□□□□□ -1.68
AMBRA1-208ENST00000529558 NOL9Q5SY16 702 aaKnown RBP4.56□□□□□ -1.68
AMBRA1-208ENST00000529558 C10orf62Q5T681 223 aaPredicted RBP4.56□□□□□ -1.68
AMBRA1-208ENST00000529558 MSL1Q68DK7 614 aa4.56□□□□□ -1.68
AMBRA1-208ENST00000529558 ILDR2Q71H61 639 aa4.56□□□□□ -1.68
AMBRA1-208ENST00000529558 FKBP9P1Q75LS8 142 aa4.56□□□□□ -1.68
AMBRA1-208ENST00000529558 UBE3DQ7Z6J8 389 aa4.56□□□□□ -1.68
AMBRA1-208ENST00000529558 DDX53Q86TM3 631 aaKnown RBP4.56□□□□□ -1.68
AMBRA1-208ENST00000529558 MAP4K3Q8IVH8 894 aa4.56□□□□□ -1.68
AMBRA1-208ENST00000529558 SMC1BQ8NDV3 1235 aa4.56□□□□□ -1.68
AMBRA1-208ENST00000529558 SYTL5Q8TDW5 730 aaPredicted RBP4.56□□□□□ -1.68
AMBRA1-208ENST00000529558 PNISRQ8TF01 805 aaKnown RBP4.56□□□□□ -1.68
AMBRA1-208ENST00000529558 DCAF4Q8WV16 495 aa4.56□□□□□ -1.68
AMBRA1-208ENST00000529558 KIFC2Q96AC6 838 aa4.56□□□□□ -1.68
AMBRA1-208ENST00000529558 ATXN3LQ9H3M9 355 aa4.56□□□□□ -1.68
AMBRA1-208ENST00000529558 AAASQ9NRG9 546 aa4.56□□□□□ -1.68
AMBRA1-208ENST00000529558 GNL3LQ9NVN8 582 aaKnown RBP4.56□□□□□ -1.68
AMBRA1-208ENST00000529558 GGA1Q9UJY5 639 aa4.56□□□□□ -1.68
AMBRA1-208ENST00000529558 PNMA8BQ9ULN7 279 aaPredicted RBP4.56□□□□□ -1.68
AMBRA1-208ENST00000529558 FHOD1Q9Y613 1164 aa4.56□□□□□ -1.68
AMBRA1-208ENST00000529558 FZD9O00144 591 aa4.55□□□□□ -1.68
AMBRA1-208ENST00000529558 TRAF5O00463 557 aa4.55□□□□□ -1.68
AMBRA1-208ENST00000529558 SNUPNO95149 360 aaKnown RBP4.55□□□□□ -1.68
AMBRA1-208ENST00000529558 ALBP02768 609 aa4.55□□□□□ -1.68
AMBRA1-208ENST00000529558 APPP05067 770 aa4.55□□□□□ -1.68
AMBRA1-208ENST00000529558 NEFMP07197 916 aa4.55□□□□□ -1.68
AMBRA1-208ENST00000529558 MYBL2P10244 700 aa4.55□□□□□ -1.68
AMBRA1-208ENST00000529558 CD68P34810 354 aaPredicted RBP4.55□□□□□ -1.68
AMBRA1-208ENST00000529558 RNF4P78317 190 aa4.55□□□□□ -1.68
AMBRA1-208ENST00000529558 GUCY1A3Q02108 690 aa4.55□□□□□ -1.68
AMBRA1-208ENST00000529558 CYP4F3Q08477 520 aa4.55□□□□□ -1.68
AMBRA1-208ENST00000529558 GTF2H3Q13889 308 aa4.55□□□□□ -1.68
AMBRA1-208ENST00000529558 TTLL4Q14679 1199 aa4.55□□□□□ -1.68
AMBRA1-208ENST00000529558 PPP2R5DQ14738 602 aa4.55□□□□□ -1.68
AMBRA1-208ENST00000529558 PRSS53Q2L4Q9 553 aa4.55□□□□□ -1.68
AMBRA1-208ENST00000529558 ATP13A4Q4VNC1 1196 aa4.55□□□□□ -1.68
AMBRA1-208ENST00000529558 DENND5AQ6IQ26 1287 aa4.55□□□□□ -1.68
AMBRA1-208ENST00000529558 USP53Q70EK8 1073 aa4.55□□□□□ -1.68
AMBRA1-208ENST00000529558 IFNL3Q8IZI9 196 aa4.55□□□□□ -1.68
AMBRA1-208ENST00000529558 CPA6Q8N4T0 437 aa4.55□□□□□ -1.68
AMBRA1-208ENST00000529558 MFSD2AQ8NA29 543 aa4.55□□□□□ -1.68
AMBRA1-208ENST00000529558 PJA1Q8NG27 643 aa4.55□□□□□ -1.68
AMBRA1-208ENST00000529558 DNAJB8Q8NHS0 232 aa4.55□□□□□ -1.68
AMBRA1-208ENST00000529558 USP33Q8TEY7 942 aa4.55□□□□□ -1.68
AMBRA1-208ENST00000529558 TIFAQ96CG3 184 aa4.55□□□□□ -1.68
AMBRA1-208ENST00000529558 SCYL1Q96KG9 808 aa4.55□□□□□ -1.68
AMBRA1-208ENST00000529558 FBXL18Q96ME1 805 aa4.55□□□□□ -1.68
AMBRA1-208ENST00000529558 KREMEN1Q96MU8 473 aa4.55□□□□□ -1.68
AMBRA1-208ENST00000529558 TMPRSS13Q9BYE2 586 aa4.55□□□□□ -1.68
AMBRA1-208ENST00000529558 FOXQ1Q9C009 403 aa4.55□□□□□ -1.68
AMBRA1-208ENST00000529558 NOL6Q9H6R4 1146 aaKnown RBP4.55□□□□□ -1.68
AMBRA1-208ENST00000529558 SENP2Q9HC62 589 aa4.55□□□□□ -1.68
AMBRA1-208ENST00000529558 KCNK4Q9NYG8 393 aa4.55□□□□□ -1.68
AMBRA1-208ENST00000529558 USP25Q9UHP3 1055 aa4.55□□□□□ -1.68
AMBRA1-208ENST00000529558 FBXL21Q9UKT6 434 aa4.55□□□□□ -1.68
AMBRA1-208ENST00000529558 NSFL1CQ9UNZ2 370 aaKnown RBP4.55□□□□□ -1.68
AMBRA1-208ENST00000529558 PCDHB12Q9Y5F1 795 aa4.55□□□□□ -1.68
AMBRA1-208ENST00000529558 PCDHA8Q9Y5H6 950 aa4.55□□□□□ -1.68
AMBRA1-208ENST00000529558 MEGF11A6BM72 1044 aa4.54□□□□□ -1.68
AMBRA1-208ENST00000529558 ST8SIA5O15466 376 aa4.54□□□□□ -1.68
AMBRA1-208ENST00000529558 ULK1O75385 1050 aa4.54□□□□□ -1.68
AMBRA1-208ENST00000529558 GLRX3O76003 335 aaKnown RBP4.54□□□□□ -1.68
AMBRA1-208ENST00000529558 FOSP01100 380 aaPredicted RBP4.54□□□□□ -1.68
AMBRA1-208ENST00000529558 FGAP02671 866 aa4.54□□□□□ -1.68
AMBRA1-208ENST00000529558 IFIT2P09913 472 aaKnown RBP4.54□□□□□ -1.68
AMBRA1-208ENST00000529558 NBPF7P0C2Y1 421 aaPredicted RBP4.54□□□□□ -1.68
AMBRA1-208ENST00000529558 CYP2C19P33261 490 aa4.54□□□□□ -1.68
AMBRA1-208ENST00000529558 IARSP41252 1262 aaKnown RBP4.54□□□□□ -1.68
AMBRA1-208ENST00000529558 ECI1P42126 302 aa4.54□□□□□ -1.68
AMBRA1-208ENST00000529558 RECQLP46063 649 aaPredicted RBP4.54□□□□□ -1.68
AMBRA1-208ENST00000529558 LSSP48449 732 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms