RNA–Protein interactions for RNA: ENST00000528989.5

LDLRAD3-203, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD3, Length 1,879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-203ENST00000528989 CETPP11597 493 aa28.51■■■□□ 2.15
LDLRAD3-203ENST00000528989 DSG3P32926 999 aa28.51■■■□□ 2.15
LDLRAD3-203ENST00000528989 USH1GQ495M9 461 aa28.51■■■□□ 2.15
LDLRAD3-203ENST00000528989 POTEEQ6S8J3 1075 aa28.51■■■□□ 2.15
LDLRAD3-203ENST00000528989 PTPN18Q99952 460 aa28.51■■■□□ 2.15
LDLRAD3-203ENST00000528989 FAM155AB1AL88 458 aaPredicted RBP28.5■■■□□ 2.15
LDLRAD3-203ENST00000528989 VWA5AO00534 786 aa28.5■■■□□ 2.15
LDLRAD3-203ENST00000528989 PEX10O60683 326 aa28.5■■■□□ 2.15
LDLRAD3-203ENST00000528989 GRM1Q13255 1194 aa28.5■■■□□ 2.15
LDLRAD3-203ENST00000528989 P2RX7Q99572 595 aaKnown RBP28.5■■■□□ 2.15
LDLRAD3-203ENST00000528989 MYH6P13533 1939 aa28.5■■■□□ 2.15
LDLRAD3-203ENST00000528989 BTBD19C9JJ37 291 aa28.49■■■□□ 2.15
LDLRAD3-203ENST00000528989 TRIM29Q14134 588 aa28.49■■■□□ 2.15
LDLRAD3-203ENST00000528989 PHF20Q9BVI0 1012 aa28.49■■■□□ 2.15
LDLRAD3-203ENST00000528989 ASCC2Q9H1I8 757 aaPredicted RBP28.49■■■□□ 2.15
LDLRAD3-203ENST00000528989 SLC38A10Q9HBR0 1119 aa28.49■■■□□ 2.15
LDLRAD3-203ENST00000528989 PCDHA1Q9Y5I3 950 aa28.49■■■□□ 2.15
LDLRAD3-203ENST00000528989 ZNF536O15090 1300 aa28.49■■■□□ 2.15
LDLRAD3-203ENST00000528989 SPDYE16A6NNV3 312 aaPredicted RBP28.49■■■□□ 2.15
LDLRAD3-203ENST00000528989 SLC10A3P09131 477 aa28.49■■■□□ 2.15
LDLRAD3-203ENST00000528989 ZSCAN22P10073 491 aaPredicted RBP28.49■■■□□ 2.15
LDLRAD3-203ENST00000528989 NUCB2P80303 420 aa28.49■■■□□ 2.15
LDLRAD3-203ENST00000528989 MCTP1Q6DN14 999 aa28.49■■■□□ 2.15
LDLRAD3-203ENST00000528989 CPXCR1Q8N123 301 aa28.49■■■□□ 2.15
LDLRAD3-203ENST00000528989 AGBL1Q96MI9 1066 aa28.49■■■□□ 2.15
LDLRAD3-203ENST00000528989 HOXC10Q9NYD6 342 aa28.49■■■□□ 2.15
LDLRAD3-203ENST00000528989 ADAMTS5Q9UNA0 930 aa28.49■■■□□ 2.15
LDLRAD3-203ENST00000528989 APLP1P51693 650 aa28.48■■■□□ 2.15
LDLRAD3-203ENST00000528989 NAPAP54920 295 aa28.48■■■□□ 2.15
LDLRAD3-203ENST00000528989 NPY5RQ15761 445 aa28.48■■■□□ 2.15
LDLRAD3-203ENST00000528989 FBXO11Q86XK2 927 aa28.48■■■□□ 2.15
LDLRAD3-203ENST00000528989 OXER1Q8TDS5 423 aa28.48■■■□□ 2.15
LDLRAD3-203ENST00000528989 RAVER2Q9HCJ3 691 aaKnown RBP28.48■■■□□ 2.15
LDLRAD3-203ENST00000528989 LOC285556D6RIA3 1793 aa28.47■■■□□ 2.15
LDLRAD3-203ENST00000528989 MMP1P03956 469 aa28.47■■■□□ 2.15
LDLRAD3-203ENST00000528989 XBP1P17861 261 aa28.47■■■□□ 2.15
LDLRAD3-203ENST00000528989 CYP4F22Q6NT55 531 aa28.47■■■□□ 2.15
LDLRAD3-203ENST00000528989 PAXIP1Q6ZW49 1069 aaPredicted RBP28.47■■■□□ 2.15
LDLRAD3-203ENST00000528989 ZIC5Q96T25 663 aa28.47■■■□□ 2.15
LDLRAD3-203ENST00000528989 AMNQ9BXJ7 453 aa28.47■■■□□ 2.15
LDLRAD3-203ENST00000528989 WDR33Q9C0J8 1336 aaKnown RBP28.47■■■□□ 2.15
LDLRAD3-203ENST00000528989 NLRP5P59047 1200 aa28.46■■■□□ 2.15
LDLRAD3-203ENST00000528989 IRX3P78415 501 aaPredicted RBP28.46■■■□□ 2.15
LDLRAD3-203ENST00000528989 FOXD4L6Q3SYB3 417 aaPredicted RBP28.46■■■□□ 2.15
LDLRAD3-203ENST00000528989 FOXD4L3Q6VB84 417 aaPredicted RBP28.46■■■□□ 2.15
LDLRAD3-203ENST00000528989 FAM43AQ8N2R8 423 aa28.46■■■□□ 2.15
LDLRAD3-203ENST00000528989 CHAMP1Q96JM3 812 aa28.46■■■□□ 2.15
LDLRAD3-203ENST00000528989 SH3GLB2Q9NR46 395 aa28.46■■■□□ 2.15
LDLRAD3-203ENST00000528989 RLFQ13129 1914 aa28.46■■■□□ 2.15
LDLRAD3-203ENST00000528989 CYP2C8P10632 490 aa28.46■■■□□ 2.15
LDLRAD3-203ENST00000528989 BTBD18B2RXH4 712 aa28.45■■■□□ 2.15
LDLRAD3-203ENST00000528989 KIF28PB7ZC32 967 aa28.45■■■□□ 2.15
LDLRAD3-203ENST00000528989 PDHXO00330 501 aa28.45■■■□□ 2.15
LDLRAD3-203ENST00000528989 REPS2Q8NFH8 660 aa28.45■■■□□ 2.15
LDLRAD3-203ENST00000528989 CREBZFQ9NS37 354 aa28.45■■■□□ 2.15
LDLRAD3-203ENST00000528989 SMCO2A6NFE2 343 aa28.44■■■□□ 2.14
LDLRAD3-203ENST00000528989 ZBED4O75132 1171 aa28.44■■■□□ 2.14
LDLRAD3-203ENST00000528989 HTRA3P83110 453 aa28.44■■■□□ 2.14
LDLRAD3-203ENST00000528989 NR5A1Q13285 461 aa28.44■■■□□ 2.14
LDLRAD3-203ENST00000528989 TMEM132BQ14DG7 1078 aa28.44■■■□□ 2.14
LDLRAD3-203ENST00000528989 CCDC102AQ96A19 550 aa28.44■■■□□ 2.14
LDLRAD3-203ENST00000528989 HHIPL1Q96JK4 782 aa28.44■■■□□ 2.14
LDLRAD3-203ENST00000528989 SMCHD1A6NHR9 2005 aa28.44■■■□□ 2.14
LDLRAD3-203ENST00000528989 F13A1P00488 732 aa28.44■■■□□ 2.14
LDLRAD3-203ENST00000528989 FAM173BQ6P4H8 233 aa28.44■■■□□ 2.14
LDLRAD3-203ENST00000528989 DIS3L2Q8IYB7 885 aaKnown RBP28.44■■■□□ 2.14
LDLRAD3-203ENST00000528989 ZMYND12Q9H0C1 365 aa28.44■■■□□ 2.14
LDLRAD3-203ENST00000528989 ICAM1P05362 532 aa28.43■■■□□ 2.14
LDLRAD3-203ENST00000528989 HERVK_113P62684 666 aa28.43■■■□□ 2.14
LDLRAD3-203ENST00000528989 KIF23Q02241 960 aaPredicted RBP28.43■■■□□ 2.14
LDLRAD3-203ENST00000528989 CCPG1Q9ULG6 757 aa28.43■■■□□ 2.14
LDLRAD3-203ENST00000528989 ZNF214Q9UL59 606 aaPredicted RBP28.42■■■□□ 2.14
LDLRAD3-203ENST00000528989 RIPK3Q9Y572 518 aa28.42■■■□□ 2.14
LDLRAD3-203ENST00000528989 CTDP1Q9Y5B0 961 aaPredicted RBP28.42■■■□□ 2.14
LDLRAD3-203ENST00000528989 PARP14Q460N5 1801 aa28.42■■■□□ 2.14
LDLRAD3-203ENST00000528989 TESPA1A2RU30 521 aaPredicted RBP28.42■■■□□ 2.14
LDLRAD3-203ENST00000528989 hCG_1984214I3L0E3 225 aa28.42■■■□□ 2.14
LDLRAD3-203ENST00000528989 PDIA4P13667 645 aaKnown RBP28.42■■■□□ 2.14
LDLRAD3-203ENST00000528989 PABPC4Q13310 644 aaKnown RBP eCLIP28.42■■■□□ 2.14
LDLRAD3-203ENST00000528989 NOM1Q5C9Z4 860 aaKnown RBP28.42■■■□□ 2.14
LDLRAD3-203ENST00000528989 ANKRD23Q86SG2 305 aa28.42■■■□□ 2.14
LDLRAD3-203ENST00000528989 ZNF713Q8N859 430 aaPredicted RBP28.42■■■□□ 2.14
LDLRAD3-203ENST00000528989 RASGRP4Q8TDF6 673 aa28.42■■■□□ 2.14
LDLRAD3-203ENST00000528989 TNPO1Q92973 898 aaKnown RBP28.42■■■□□ 2.14
LDLRAD3-203ENST00000528989 BTBD7Q9P203 1132 aa28.42■■■□□ 2.14
LDLRAD3-203ENST00000528989 MYPNQ86TC9 1320 aa28.41■■■□□ 2.14
LDLRAD3-203ENST00000528989 IGF2BP3O00425 579 aaKnown RBP eCLIP28.41■■■□□ 2.14
LDLRAD3-203ENST00000528989 OPLAHO14841 1288 aa28.41■■■□□ 2.14
LDLRAD3-203ENST00000528989 OSBPP22059 807 aa28.41■■■□□ 2.14
LDLRAD3-203ENST00000528989 RESTQ13127 1097 aa28.41■■■□□ 2.14
LDLRAD3-203ENST00000528989 DEFB115Q30KQ5 88 aa28.41■■■□□ 2.14
LDLRAD3-203ENST00000528989 LBX2Q6XYB7 198 aa28.41■■■□□ 2.14
LDLRAD3-203ENST00000528989 CCDC148Q8NFR7 591 aa28.41■■■□□ 2.14
LDLRAD3-203ENST00000528989 HOMER2Q9NSB8 354 aa28.41■■■□□ 2.14
LDLRAD3-203ENST00000528989 MANSC4A6NHS7 340 aaPredicted RBP28.4■■■□□ 2.14
LDLRAD3-203ENST00000528989 CCDC12Q8WUD4 166 aaPredicted RBP28.4■■■□□ 2.14
LDLRAD3-203ENST00000528989 TXNRD2Q9NNW7 524 aa28.4■■■□□ 2.14
LDLRAD3-203ENST00000528989 PCDHA4Q9UN74 947 aa28.4■■■□□ 2.14
LDLRAD3-203ENST00000528989 FDX1P10109 184 aa28.4■■■□□ 2.14
LDLRAD3-203ENST00000528989 PLS1Q14651 629 aa28.4■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms