RNA–Protein interactions for RNA: ENST00000528877.5

ITGB1-218, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-218ENST00000528877 HMGCS2P54868 508 aa8.52□□□□□ -1.05
ITGB1-218ENST00000528877 BACE1P56817 501 aa8.52□□□□□ -1.05
ITGB1-218ENST00000528877 JAG1P78504 1218 aa8.52□□□□□ -1.05
ITGB1-218ENST00000528877 SPP2Q13103 211 aa8.52□□□□□ -1.05
ITGB1-218ENST00000528877 AAMPQ13685 434 aa8.52□□□□□ -1.05
ITGB1-218ENST00000528877 TREML2Q5T2D2 321 aa8.52□□□□□ -1.05
ITGB1-218ENST00000528877 GADL1Q6ZQY3 521 aa8.52□□□□□ -1.05
ITGB1-218ENST00000528877 TTC6Q86TZ1 520 aa8.52□□□□□ -1.05
ITGB1-218ENST00000528877 CCDC84Q86UT8 332 aaPredicted RBP8.52□□□□□ -1.05
ITGB1-218ENST00000528877 LINC00528Q8N1L1 170 aa8.52□□□□□ -1.05
ITGB1-218ENST00000528877 EDC3Q96F86 508 aaKnown RBP8.52□□□□□ -1.05
ITGB1-218ENST00000528877 GPATCH3Q96I76 525 aa8.52□□□□□ -1.05
ITGB1-218ENST00000528877 C12orf42Q96LP6 360 aa8.52□□□□□ -1.05
ITGB1-218ENST00000528877 ZFP42Q96MM3 310 aa8.52□□□□□ -1.05
ITGB1-218ENST00000528877 DCP1AQ9NPI6 582 aaPredicted RBP8.52□□□□□ -1.05
ITGB1-218ENST00000528877 SRRDQ9UH36 339 aa8.52□□□□□ -1.05
ITGB1-218ENST00000528877 SAP30BPQ9UHR5 308 aaKnown RBP8.52□□□□□ -1.05
ITGB1-218ENST00000528877 CPA4Q9UI42 421 aa8.52□□□□□ -1.05
ITGB1-218ENST00000528877 TTC41PQ6P2S7 1318 aa8.52□□□□□ -1.05
ITGB1-218ENST00000528877 SALL3Q9BXA9 1300 aa8.52□□□□□ -1.05
ITGB1-218ENST00000528877 A0A0G2JMZ2 1700 aa8.51□□□□□ -1.05
ITGB1-218ENST00000528877 ROBO3Q96MS0 1386 aa8.51□□□□□ -1.05
ITGB1-218ENST00000528877 C19orf81C9J6K1 198 aa8.51□□□□□ -1.05
ITGB1-218ENST00000528877 MBD4O95243 580 aa8.51□□□□□ -1.05
ITGB1-218ENST00000528877 SHMT1P34896 483 aa8.51□□□□□ -1.05
ITGB1-218ENST00000528877 GCLCP48506 637 aaPredicted RBP8.51□□□□□ -1.05
ITGB1-218ENST00000528877 FCGRTP55899 365 aa8.51□□□□□ -1.05
ITGB1-218ENST00000528877 SLC9C1Q4G0N8 1177 aa8.51□□□□□ -1.05
ITGB1-218ENST00000528877 ZSCAN25Q6NSZ9 544 aa8.51□□□□□ -1.05
ITGB1-218ENST00000528877 Q6ZVU0 165 aa8.51□□□□□ -1.05
ITGB1-218ENST00000528877 LCORLQ8N3X6 602 aa8.51□□□□□ -1.05
ITGB1-218ENST00000528877 SMCR8Q8TEV9 937 aaPredicted RBP8.51□□□□□ -1.05
ITGB1-218ENST00000528877 BOLA2Q9H3K6 86 aa8.51□□□□□ -1.05
ITGB1-218ENST00000528877 ATP8A2Q9NTI2 1148 aa8.51□□□□□ -1.05
ITGB1-218ENST00000528877 MORF4L1Q9UBU8 362 aa8.51□□□□□ -1.05
ITGB1-218ENST00000528877 GREB1LQ9C091 1923 aaPredicted RBP8.5□□□□□ -1.05
ITGB1-218ENST00000528877 USP17L10C9JJH3 530 aa8.5□□□□□ -1.05
ITGB1-218ENST00000528877 SMARCA5O60264 1052 aaPredicted RBP8.5□□□□□ -1.05
ITGB1-218ENST00000528877 GDF11O95390 407 aa8.5□□□□□ -1.05
ITGB1-218ENST00000528877 GH2P01242 217 aa8.5□□□□□ -1.05
ITGB1-218ENST00000528877 SNRPBP14678 240 aaKnown RBP8.5□□□□□ -1.05
ITGB1-218ENST00000528877 HOXD10P28358 340 aa8.5□□□□□ -1.05
ITGB1-218ENST00000528877 PSMC4P43686 418 aa8.5□□□□□ -1.05
ITGB1-218ENST00000528877 PLCD1P51178 756 aa8.5□□□□□ -1.05
ITGB1-218ENST00000528877 HDAC1Q13547 482 aaPredicted RBP8.5□□□□□ -1.05
ITGB1-218ENST00000528877 IRF5Q13568 498 aa8.5□□□□□ -1.05
ITGB1-218ENST00000528877 TMEM132AQ24JP5 1023 aa8.5□□□□□ -1.05
ITGB1-218ENST00000528877 SHROOM1Q2M3G4 852 aaPredicted RBP8.5□□□□□ -1.05
ITGB1-218ENST00000528877 NBPF11Q86T75 865 aa8.5□□□□□ -1.05
ITGB1-218ENST00000528877 KBTBD3Q8NAB2 608 aa8.5□□□□□ -1.05
ITGB1-218ENST00000528877 GTF3C2Q8WUA4 911 aaPredicted RBP8.5□□□□□ -1.05
ITGB1-218ENST00000528877 PURBQ96QR8 312 aaKnown RBP8.5□□□□□ -1.05
ITGB1-218ENST00000528877 KIAA1683Q9H0B3 1180 aa8.5□□□□□ -1.05
ITGB1-218ENST00000528877 ASCC2Q9H1I8 757 aaPredicted RBP8.5□□□□□ -1.05
ITGB1-218ENST00000528877 SWAP70Q9UH65 585 aa8.5□□□□□ -1.05
ITGB1-218ENST00000528877 MYPNQ86TC9 1320 aa8.5□□□□□ -1.05
ITGB1-218ENST00000528877 KIAA0100Q14667 2235 aaKnown RBP8.49□□□□□ -1.05
ITGB1-218ENST00000528877 GPR37L1O60883 481 aa8.49□□□□□ -1.05
ITGB1-218ENST00000528877 ZFYP08048 801 aaPredicted RBP8.49□□□□□ -1.05
ITGB1-218ENST00000528877 BMP2P12643 396 aa8.49□□□□□ -1.05
ITGB1-218ENST00000528877 PRKCZQ05513 592 aa8.49□□□□□ -1.05
ITGB1-218ENST00000528877 MCM6Q14566 821 aa8.49□□□□□ -1.05
ITGB1-218ENST00000528877 ABCB5Q2M3G0 1257 aa8.49□□□□□ -1.05
ITGB1-218ENST00000528877 CERKLQ49MI3 558 aaPredicted RBP8.49□□□□□ -1.05
ITGB1-218ENST00000528877 GIMAP6Q6P9H5 292 aa8.49□□□□□ -1.05
ITGB1-218ENST00000528877 USP17L2Q6R6M4 530 aa8.49□□□□□ -1.05
ITGB1-218ENST00000528877 LBX2Q6XYB7 198 aa8.49□□□□□ -1.05
ITGB1-218ENST00000528877 NPAS3Q8IXF0 933 aa8.49□□□□□ -1.05
ITGB1-218ENST00000528877 PI4K2BQ8TCG2 481 aa8.49□□□□□ -1.05
ITGB1-218ENST00000528877 SDR42E1Q8WUS8 393 aa8.49□□□□□ -1.05
ITGB1-218ENST00000528877 ARMT1Q9H993 441 aa8.49□□□□□ -1.05
ITGB1-218ENST00000528877 MCM9Q9NXL9 1143 aa8.49□□□□□ -1.05
ITGB1-218ENST00000528877 TMOD4Q9NZQ9 345 aa8.49□□□□□ -1.05
ITGB1-218ENST00000528877 ZNF236Q9UL36 1845 aa8.49□□□□□ -1.05
ITGB1-218ENST00000528877 ERC2O15083 957 aa8.48□□□□□ -1.05
ITGB1-218ENST00000528877 GLRX3O76003 335 aaKnown RBP8.48□□□□□ -1.05
ITGB1-218ENST00000528877 GUCY1A2P33402 732 aa8.48□□□□□ -1.05
ITGB1-218ENST00000528877 USP14P54578 494 aa8.48□□□□□ -1.05
ITGB1-218ENST00000528877 HERVK_113P62684 666 aa8.48□□□□□ -1.05
ITGB1-218ENST00000528877 SLC4A8Q2Y0W8 1093 aa8.48□□□□□ -1.05
ITGB1-218ENST00000528877 C12orf60Q5U649 245 aa8.48□□□□□ -1.05
ITGB1-218ENST00000528877 TMEM179Q6ZVK1 233 aa8.48□□□□□ -1.05
ITGB1-218ENST00000528877 C16orf86Q6ZW13 317 aa8.48□□□□□ -1.05
ITGB1-218ENST00000528877 TICAM2Q86XR7 235 aa8.48□□□□□ -1.05
ITGB1-218ENST00000528877 ANKRD13CQ8N6S4 541 aa8.48□□□□□ -1.05
ITGB1-218ENST00000528877 APPBP2Q92624 585 aa8.48□□□□□ -1.05
ITGB1-218ENST00000528877 GCC1Q96CN9 775 aa8.48□□□□□ -1.05
ITGB1-218ENST00000528877 CRBNQ96SW2 442 aa8.48□□□□□ -1.05
ITGB1-218ENST00000528877 PUS7LQ9H0K6 701 aaKnown RBP8.48□□□□□ -1.05
ITGB1-218ENST00000528877 ARPP21Q9UBL0 812 aaPredicted RBP8.48□□□□□ -1.05
ITGB1-218ENST00000528877 MYH8P13535 1937 aa8.48□□□□□ -1.05
ITGB1-218ENST00000528877 PLXNB2O15031 1838 aa8.47□□□□□ -1.05
ITGB1-218ENST00000528877 BAZ2AQ9UIF9 1905 aaKnown RBP8.47□□□□□ -1.05
ITGB1-218ENST00000528877 ERVH48-1M5A8F1 160 aa8.47□□□□□ -1.05
ITGB1-218ENST00000528877 TNPO2O14787 897 aaKnown RBP8.47□□□□□ -1.05
ITGB1-218ENST00000528877 CHGBP05060 677 aa8.47□□□□□ -1.05
ITGB1-218ENST00000528877 POLR3DP05423 398 aaPredicted RBP8.47□□□□□ -1.05
ITGB1-218ENST00000528877 CAPN2P17655 700 aa8.47□□□□□ -1.05
ITGB1-218ENST00000528877 VCAM1P19320 739 aa8.47□□□□□ -1.05
ITGB1-218ENST00000528877 MX1P20591 662 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms