RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 STAT3P40763 770 aa9.15□□□□□ -0.94
SSBP3-211ENST00000528787 CCT2P78371 535 aaKnown RBP9.15□□□□□ -0.94
SSBP3-211ENST00000528787 STK3Q13188 491 aa9.15□□□□□ -0.94
SSBP3-211ENST00000528787 PWP2Q15269 919 aaKnown RBP9.15□□□□□ -0.94
SSBP3-211ENST00000528787 CDC37Q16543 378 aaPredicted RBP9.15□□□□□ -0.94
SSBP3-211ENST00000528787 ME3Q16798 604 aa9.15□□□□□ -0.94
SSBP3-211ENST00000528787 TREML2Q5T2D2 321 aa9.15□□□□□ -0.94
SSBP3-211ENST00000528787 GPAT2Q6NUI2 795 aa9.15□□□□□ -0.94
SSBP3-211ENST00000528787 CCDC84Q86UT8 332 aaPredicted RBP9.15□□□□□ -0.94
SSBP3-211ENST00000528787 ERO1AQ96HE7 468 aa9.15□□□□□ -0.94
SSBP3-211ENST00000528787 TMX3Q96JJ7 454 aa9.15□□□□□ -0.94
SSBP3-211ENST00000528787 C6orf50Q9HD87 102 aa9.15□□□□□ -0.94
SSBP3-211ENST00000528787 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.15□□□□□ -0.94
SSBP3-211ENST00000528787 MORF4L1Q9UBU8 362 aa9.15□□□□□ -0.94
SSBP3-211ENST00000528787 CCPG1Q9ULG6 757 aa9.15□□□□□ -0.94
SSBP3-211ENST00000528787 SPDYE16A6NNV3 312 aaPredicted RBP9.14□□□□□ -0.95
SSBP3-211ENST00000528787 FOSP01100 380 aaPredicted RBP9.14□□□□□ -0.95
SSBP3-211ENST00000528787 GOLGA8HP0CJ92 632 aa9.14□□□□□ -0.95
SSBP3-211ENST00000528787 SCG2P13521 617 aa9.14□□□□□ -0.95
SSBP3-211ENST00000528787 PRMT2P55345 433 aa9.14□□□□□ -0.95
SSBP3-211ENST00000528787 ERVK-9P63128 1117 aa9.14□□□□□ -0.95
SSBP3-211ENST00000528787 ERVK-24P63145 666 aa9.14□□□□□ -0.95
SSBP3-211ENST00000528787 SCRN1Q12765 414 aa9.14□□□□□ -0.95
SSBP3-211ENST00000528787 MOGSQ13724 837 aa9.14□□□□□ -0.95
SSBP3-211ENST00000528787 PLS1Q14651 629 aa9.14□□□□□ -0.95
SSBP3-211ENST00000528787 PFKFB3Q16875 520 aaPredicted RBP9.14□□□□□ -0.95
SSBP3-211ENST00000528787 SHROOM1Q2M3G4 852 aaPredicted RBP9.14□□□□□ -0.95
SSBP3-211ENST00000528787 NOL8Q76FK4 1167 aaKnown RBP9.14□□□□□ -0.95
SSBP3-211ENST00000528787 RIOX2Q8IUF8 465 aa9.14□□□□□ -0.95
SSBP3-211ENST00000528787 CCDC144CPQ8IYA2 1237 aa9.14□□□□□ -0.95
SSBP3-211ENST00000528787 TRMT44Q8IYL2 757 aaKnown RBP9.14□□□□□ -0.95
SSBP3-211ENST00000528787 ABRAQ8N0Z2 381 aa9.14□□□□□ -0.95
SSBP3-211ENST00000528787 FAM43AQ8N2R8 423 aa9.14□□□□□ -0.95
SSBP3-211ENST00000528787 SOCS4Q8WXH5 440 aa9.14□□□□□ -0.95
SSBP3-211ENST00000528787 COA7Q96BR5 231 aa9.14□□□□□ -0.95
SSBP3-211ENST00000528787 MTMR8Q96EF0 704 aa9.14□□□□□ -0.95
SSBP3-211ENST00000528787 NUP88Q99567 741 aaPredicted RBP9.14□□□□□ -0.95
SSBP3-211ENST00000528787 MYL10Q9BUA6 226 aa9.14□□□□□ -0.95
SSBP3-211ENST00000528787 SLC26A6Q9BXS9 759 aa9.14□□□□□ -0.95
SSBP3-211ENST00000528787 ACAD9Q9H845 621 aa9.14□□□□□ -0.95
SSBP3-211ENST00000528787 ORC3Q9UBD5 711 aaPredicted RBP9.14□□□□□ -0.95
SSBP3-211ENST00000528787 HPS5Q9UPZ3 1129 aa9.14□□□□□ -0.95
SSBP3-211ENST00000528787 PCDHA1Q9Y5I3 950 aa9.14□□□□□ -0.95
SSBP3-211ENST00000528787 A0A0G2JMZ2 1700 aa9.14□□□□□ -0.95
SSBP3-211ENST00000528787 COL11A1P12107 1806 aaPredicted RBP9.13□□□□□ -0.95
SSBP3-211ENST00000528787 IGF2BP3O00425 579 aaKnown RBP eCLIP9.13□□□□□ -0.95
SSBP3-211ENST00000528787 ADD1P35611 737 aaKnown RBP9.13□□□□□ -0.95
SSBP3-211ENST00000528787 FCGRTP55899 365 aa9.13□□□□□ -0.95
SSBP3-211ENST00000528787 KCTD2Q14681 263 aa9.13□□□□□ -0.95
SSBP3-211ENST00000528787 SNRNP48Q6IEG0 339 aaKnown RBP9.13□□□□□ -0.95
SSBP3-211ENST00000528787 SAMD1Q6SPF0 538 aaPredicted RBP9.13□□□□□ -0.95
SSBP3-211ENST00000528787 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.13□□□□□ -0.956e-6■■■□□ 14.6
SSBP3-211ENST00000528787 HOMER1Q86YM7 354 aa9.13□□□□□ -0.95
SSBP3-211ENST00000528787 STAG2Q8N3U4 1231 aa9.13□□□□□ -0.95
SSBP3-211ENST00000528787 SRBD1Q8N5C6 995 aaKnown RBP9.13□□□□□ -0.95
SSBP3-211ENST00000528787 P2RX7Q99572 595 aaKnown RBP9.13□□□□□ -0.95
SSBP3-211ENST00000528787 NAP1L4Q99733 375 aaKnown RBP9.13□□□□□ -0.95
SSBP3-211ENST00000528787 PTPN18Q99952 460 aa9.13□□□□□ -0.95
SSBP3-211ENST00000528787 PAGR1Q9BTK6 254 aa9.13□□□□□ -0.95
SSBP3-211ENST00000528787 SPATC1LQ9H0A9 340 aa9.13□□□□□ -0.95
SSBP3-211ENST00000528787 JMJD4Q9H9V9 463 aa9.13□□□□□ -0.95
SSBP3-211ENST00000528787 VAT1LQ9HCJ6 419 aa9.13□□□□□ -0.95
SSBP3-211ENST00000528787 GPHNQ9NQX3 736 aaPredicted RBP9.13□□□□□ -0.95
SSBP3-211ENST00000528787 BARHL2Q9NY43 387 aa9.13□□□□□ -0.95
SSBP3-211ENST00000528787 ADD3Q9UEY8 706 aaKnown RBP9.13□□□□□ -0.95
SSBP3-211ENST00000528787 V9GY48 417 aaPredicted RBP9.13□□□□□ -0.95
SSBP3-211ENST00000528787 RBBP6Q7Z6E9 1792 aaKnown RBP9.12□□□□□ -0.95
SSBP3-211ENST00000528787 CNTNAP5Q8WYK1 1306 aa9.12□□□□□ -0.95
SSBP3-211ENST00000528787 BAZ2BQ9UIF8 2168 aaKnown RBP9.12□□□□□ -0.95
SSBP3-211ENST00000528787 RLFQ13129 1914 aa9.12□□□□□ -0.95
SSBP3-211ENST00000528787 ESYT2A0FGR8 921 aa9.12□□□□□ -0.95
SSBP3-211ENST00000528787 PTPDC1A2A3K4 754 aa9.12□□□□□ -0.95
SSBP3-211ENST00000528787 H3BQV1 296 aa9.12□□□□□ -0.95
SSBP3-211ENST00000528787 AOC2O75106 756 aa9.12□□□□□ -0.95
SSBP3-211ENST00000528787 FCER1AP12319 257 aa9.12□□□□□ -0.95
SSBP3-211ENST00000528787 RXRAP19793 462 aa9.12□□□□□ -0.95
SSBP3-211ENST00000528787 CDC27P30260 824 aa9.12□□□□□ -0.95
SSBP3-211ENST00000528787 SLC16A2P36021 539 aa9.12□□□□□ -0.95
SSBP3-211ENST00000528787 NAPAP54920 295 aa9.12□□□□□ -0.95
SSBP3-211ENST00000528787 SP3Q02447 781 aa9.12□□□□□ -0.95
SSBP3-211ENST00000528787 CRHR2Q13324 411 aa9.12□□□□□ -0.95
SSBP3-211ENST00000528787 AP3B2Q13367 1082 aa9.12□□□□□ -0.95
SSBP3-211ENST00000528787 CUL4AQ13619 759 aa9.12□□□□□ -0.95
SSBP3-211ENST00000528787 GNL2Q13823 731 aaKnown RBP9.12□□□□□ -0.95
SSBP3-211ENST00000528787 QRICH1Q2TAL8 776 aa9.12□□□□□ -0.95
SSBP3-211ENST00000528787 IFFO2Q5TF58 517 aa9.12□□□□□ -0.95
SSBP3-211ENST00000528787 CCDC174Q6PII3 467 aa9.12□□□□□ -0.95
SSBP3-211ENST00000528787 HEATR3Q7Z4Q2 680 aa9.12□□□□□ -0.95
SSBP3-211ENST00000528787 NCAPG2Q86XI2 1143 aa9.12□□□□□ -0.95
SSBP3-211ENST00000528787 CCDC83Q8IWF9 413 aa9.12□□□□□ -0.95
SSBP3-211ENST00000528787 CPXCR1Q8N123 301 aa9.12□□□□□ -0.95
SSBP3-211ENST00000528787 ANKRD13CQ8N6S4 541 aa9.12□□□□□ -0.95
SSBP3-211ENST00000528787 ATG4CQ96DT6 458 aa9.12□□□□□ -0.95
SSBP3-211ENST00000528787 PIGSQ96S52 555 aa9.12□□□□□ -0.95
SSBP3-211ENST00000528787 UBA5Q9GZZ9 404 aa9.12□□□□□ -0.95
SSBP3-211ENST00000528787 SENP2Q9HC62 589 aa9.12□□□□□ -0.95
SSBP3-211ENST00000528787 RNF186Q9NXI6 227 aa9.12□□□□□ -0.95
SSBP3-211ENST00000528787 ATP6V1DQ9Y5K8 247 aa9.12□□□□□ -0.95
SSBP3-211ENST00000528787 TNPO2O14787 897 aaKnown RBP9.11□□□□□ -0.95
SSBP3-211ENST00000528787 FKTNO75072 461 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms