RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 PKN1Q16512 942 aa14.07□□□□□ -0.16
TRAF3IP2-211ENST00000528599 RRP36Q96EU6 259 aaKnown RBP14.07□□□□□ -0.16
TRAF3IP2-211ENST00000528599 RANBP17Q9H2T7 1088 aaKnown RBP14.07□□□□□ -0.16
TRAF3IP2-211ENST00000528599 HOXC10Q9NYD6 342 aa14.07□□□□□ -0.16
TRAF3IP2-211ENST00000528599 ORC3Q9UBD5 711 aaPredicted RBP14.07□□□□□ -0.16
TRAF3IP2-211ENST00000528599 SMC3Q9UQE7 1217 aa14.07□□□□□ -0.16
TRAF3IP2-211ENST00000528599 SLC45A1Q9Y2W3 748 aa14.07□□□□□ -0.16
TRAF3IP2-211ENST00000528599 MYPNQ86TC9 1320 aa14.07□□□□□ -0.16
TRAF3IP2-211ENST00000528599 STK36Q9NRP7 1315 aa14.07□□□□□ -0.16
TRAF3IP2-211ENST00000528599 VWA5AO00534 786 aa14.07□□□□□ -0.16
TRAF3IP2-211ENST00000528599 PPP1R11O60927 126 aaPredicted RBP14.07□□□□□ -0.16
TRAF3IP2-211ENST00000528599 HSP90AA1P07900 732 aaKnown RBP14.07□□□□□ -0.16
TRAF3IP2-211ENST00000528599 CYP2C8P10632 490 aa14.07□□□□□ -0.16
TRAF3IP2-211ENST00000528599 OSBPP22059 807 aa14.07□□□□□ -0.16
TRAF3IP2-211ENST00000528599 GJB2P29033 226 aa14.07□□□□□ -0.16
TRAF3IP2-211ENST00000528599 CDC37Q16543 378 aaPredicted RBP14.07□□□□□ -0.16
TRAF3IP2-211ENST00000528599 QRICH1Q2TAL8 776 aa14.07□□□□□ -0.16
TRAF3IP2-211ENST00000528599 TRIM22Q8IYM9 498 aa14.07□□□□□ -0.16
TRAF3IP2-211ENST00000528599 AIFM3Q96NN9 605 aa14.07□□□□□ -0.16
TRAF3IP2-211ENST00000528599 SLC38A10Q9HBR0 1119 aa14.07□□□□□ -0.16
TRAF3IP2-211ENST00000528599 PNMA6FA0A0J9YX94 578 aa14.06□□□□□ -0.16
TRAF3IP2-211ENST00000528599 ZBTB5O15062 677 aa14.06□□□□□ -0.16
TRAF3IP2-211ENST00000528599 PEX10O60683 326 aa14.06□□□□□ -0.16
TRAF3IP2-211ENST00000528599 DEXIO95424 95 aa14.06□□□□□ -0.16
TRAF3IP2-211ENST00000528599 TBC1D8O95759 1140 aa14.06□□□□□ -0.16
TRAF3IP2-211ENST00000528599 LBX1P52954 281 aa14.06□□□□□ -0.16
TRAF3IP2-211ENST00000528599 HERVK_113P62684 666 aa14.06□□□□□ -0.16
TRAF3IP2-211ENST00000528599 HMGN5P82970 282 aaKnown RBP14.06□□□□□ -0.16
TRAF3IP2-211ENST00000528599 AKAP17AQ02040 695 aaKnown RBP14.06□□□□□ -0.16
TRAF3IP2-211ENST00000528599 REM2Q8IYK8 340 aaPredicted RBP14.06□□□□□ -0.16
TRAF3IP2-211ENST00000528599 REPS2Q8NFH8 660 aa14.06□□□□□ -0.16
TRAF3IP2-211ENST00000528599 DAXXQ9UER7 740 aaPredicted RBP14.06□□□□□ -0.16
TRAF3IP2-211ENST00000528599 ZNF536O15090 1300 aa14.06□□□□□ -0.16
TRAF3IP2-211ENST00000528599 TAL1P17542 331 aaPredicted RBP14.05□□□□□ -0.16
TRAF3IP2-211ENST00000528599 PFKFB3Q16875 520 aaPredicted RBP14.05□□□□□ -0.16
TRAF3IP2-211ENST00000528599 CCDC174Q6PII3 467 aa14.05□□□□□ -0.16
TRAF3IP2-211ENST00000528599 LBX2Q6XYB7 198 aa14.05□□□□□ -0.16
TRAF3IP2-211ENST00000528599 SHISA4Q96DD7 197 aa14.05□□□□□ -0.16
TRAF3IP2-211ENST00000528599 BEGAINQ9BUH8 593 aa14.05□□□□□ -0.16
TRAF3IP2-211ENST00000528599 ZCCHC17Q9NP64 241 aaKnown RBP14.05□□□□□ -0.16
TRAF3IP2-211ENST00000528599 SAGE1Q9NXZ1 904 aa14.05□□□□□ -0.16
TRAF3IP2-211ENST00000528599 RBM27Q9P2N5 1060 aaKnown RBP14.05□□□□□ -0.16
TRAF3IP2-211ENST00000528599 SEC63Q9UGP8 760 aaKnown RBP14.05□□□□□ -0.16
TRAF3IP2-211ENST00000528599 PNMA3Q9UL41 463 aa14.05□□□□□ -0.16
TRAF3IP2-211ENST00000528599 CASP8AP2Q9UKL3 1982 aa14.04□□□□□ -0.16
TRAF3IP2-211ENST00000528599 ZBED4O75132 1171 aa14.04□□□□□ -0.16
TRAF3IP2-211ENST00000528599 FDX1P10109 184 aa14.04□□□□□ -0.16
TRAF3IP2-211ENST00000528599 SCG2P13521 617 aa14.04□□□□□ -0.16
TRAF3IP2-211ENST00000528599 TMEM132BQ14DG7 1078 aa14.04□□□□□ -0.16
TRAF3IP2-211ENST00000528599 GPKOWQ92917 476 aaPredicted RBP eCLIP14.04□□□□□ -0.16
TRAF3IP2-211ENST00000528599 ALG1Q9BT22 464 aa14.04□□□□□ -0.16
TRAF3IP2-211ENST00000528599 RAVER2Q9HCJ3 691 aaKnown RBP14.04□□□□□ -0.16
TRAF3IP2-211ENST00000528599 GJB4Q9NTQ9 266 aa14.04□□□□□ -0.16
TRAF3IP2-211ENST00000528599 BTBD7Q9P203 1132 aa14.04□□□□□ -0.16
TRAF3IP2-211ENST00000528599 RBPJLQ9UBG7 517 aa14.04□□□□□ -0.16
TRAF3IP2-211ENST00000528599 A0A0G2JMZ2 1700 aa14.04□□□□□ -0.16
TRAF3IP2-211ENST00000528599 CNMDO75829 334 aa14.04□□□□□ -0.16
TRAF3IP2-211ENST00000528599 CRHR2Q13324 411 aa14.04□□□□□ -0.16
TRAF3IP2-211ENST00000528599 WWC2Q6AWC2 1192 aa14.04□□□□□ -0.16
TRAF3IP2-211ENST00000528599 TYW1BQ6NUM6 668 aa14.04□□□□□ -0.16
TRAF3IP2-211ENST00000528599 HEATR3Q7Z4Q2 680 aa14.04□□□□□ -0.16
TRAF3IP2-211ENST00000528599 CPXCR1Q8N123 301 aa14.04□□□□□ -0.16
TRAF3IP2-211ENST00000528599 FAM184AQ8NB25 1140 aa14.04□□□□□ -0.16
TRAF3IP2-211ENST00000528599 COA7Q96BR5 231 aa14.04□□□□□ -0.16
TRAF3IP2-211ENST00000528599 AGBL1Q96MI9 1066 aa14.04□□□□□ -0.16
TRAF3IP2-211ENST00000528599 TXNRD2Q9NNW7 524 aa14.04□□□□□ -0.16
TRAF3IP2-211ENST00000528599 ZNF214Q9UL59 606 aaPredicted RBP14.04□□□□□ -0.16
TRAF3IP2-211ENST00000528599 MYH6P13533 1939 aa14.04□□□□□ -0.16
TRAF3IP2-211ENST00000528599 COL11A1P12107 1806 aaPredicted RBP14.03□□□□□ -0.16
TRAF3IP2-211ENST00000528599 CA12O43570 354 aa14.03□□□□□ -0.16
TRAF3IP2-211ENST00000528599 ICAM1P05362 532 aa14.03□□□□□ -0.16
TRAF3IP2-211ENST00000528599 CTCFP49711 727 aaPredicted RBP14.03□□□□□ -0.16
TRAF3IP2-211ENST00000528599 FOSBP53539 338 aa14.03□□□□□ -0.16
TRAF3IP2-211ENST00000528599 OTUD7BQ6GQQ9 843 aa14.03□□□□□ -0.16
TRAF3IP2-211ENST00000528599 FBXO11Q86XK2 927 aa14.03□□□□□ -0.16
TRAF3IP2-211ENST00000528599 MB21D1Q8N884 522 aa14.03□□□□□ -0.16
TRAF3IP2-211ENST00000528599 SMCR8Q8TEV9 937 aaPredicted RBP14.03□□□□□ -0.16
TRAF3IP2-211ENST00000528599 PARK7Q99497 189 aaKnown RBP14.03□□□□□ -0.16
TRAF3IP2-211ENST00000528599 PAGR1Q9BTK6 254 aa14.03□□□□□ -0.16
TRAF3IP2-211ENST00000528599 AMNQ9BXJ7 453 aa14.03□□□□□ -0.16
TRAF3IP2-211ENST00000528599 CFHR5Q9BXR6 569 aa14.03□□□□□ -0.16
TRAF3IP2-211ENST00000528599 VPS54Q9P1Q0 977 aa14.03□□□□□ -0.16
TRAF3IP2-211ENST00000528599 CTDP1Q9Y5B0 961 aaPredicted RBP14.03□□□□□ -0.16
TRAF3IP2-211ENST00000528599 STXBP3O00186 592 aa14.02□□□□□ -0.16
TRAF3IP2-211ENST00000528599 ATP2A1O14983 1001 aa14.02□□□□□ -0.16
TRAF3IP2-211ENST00000528599 CAP1Q01518 475 aa14.02□□□□□ -0.16
TRAF3IP2-211ENST00000528599 TAF1CQ15572 869 aaPredicted RBP14.02□□□□□ -0.16
TRAF3IP2-211ENST00000528599 USH1GQ495M9 461 aa14.02□□□□□ -0.16
TRAF3IP2-211ENST00000528599 WASF1Q92558 559 aa14.02□□□□□ -0.16
TRAF3IP2-211ENST00000528599 BARHL2Q9NY43 387 aa14.02□□□□□ -0.16
TRAF3IP2-211ENST00000528599 CCPG1Q9ULG6 757 aa14.02□□□□□ -0.16
TRAF3IP2-211ENST00000528599 RABGAP1Q9Y3P9 1069 aa14.02□□□□□ -0.16
TRAF3IP2-211ENST00000528599 RIPK3Q9Y572 518 aa14.02□□□□□ -0.16
TRAF3IP2-211ENST00000528599 PCDHA1Q9Y5I3 950 aa14.02□□□□□ -0.16
TRAF3IP2-211ENST00000528599 ADGRA2Q96PE1 1338 aa14.02□□□□□ -0.17
TRAF3IP2-211ENST00000528599 SMCHD1A6NHR9 2005 aa14.01□□□□□ -0.17
TRAF3IP2-211ENST00000528599 OAZ1P54368 228 aa14.01□□□□□ -0.17
TRAF3IP2-211ENST00000528599 PLS1Q14651 629 aa14.01□□□□□ -0.17
TRAF3IP2-211ENST00000528599 Q3C1V9 767 aa14.01□□□□□ -0.17
TRAF3IP2-211ENST00000528599 COL13A1Q5TAT6 717 aaPredicted RBP14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms