RNA–Protein interactions for RNA: ENST00000528484.5

CMTM1-211, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 726 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-211ENST00000528484 AKNAD1Q5T1N1 836 aa13.79□□□□□ -0.2
CMTM1-211ENST00000528484 CCSAPQ6IQ19 270 aaPredicted RBP13.79□□□□□ -0.2
CMTM1-211ENST00000528484 ARMCX2Q7L311 632 aa13.79□□□□□ -0.2
CMTM1-211ENST00000528484 STK11IPQ8N1F8 1099 aa13.79□□□□□ -0.2
CMTM1-211ENST00000528484 PBX4Q9BYU1 374 aa13.79□□□□□ -0.2
CMTM1-211ENST00000528484 PPP1R12CQ9BZL4 782 aa13.79□□□□□ -0.2
CMTM1-211ENST00000528484 LRRCC1Q9C099 1032 aa13.79□□□□□ -0.2
CMTM1-211ENST00000528484 RAVER2Q9HCJ3 691 aaKnown RBP13.79□□□□□ -0.2
CMTM1-211ENST00000528484 CLIP2Q9UDT6 1046 aa13.79□□□□□ -0.2
CMTM1-211ENST00000528484 MYADML2A6NDP7 307 aa13.78□□□□□ -0.2
CMTM1-211ENST00000528484 CABYRO75952 493 aa13.78□□□□□ -0.2
CMTM1-211ENST00000528484 APPP05067 770 aa13.78□□□□□ -0.2
CMTM1-211ENST00000528484 SLC3A2P08195 630 aaKnown RBP13.78□□□□□ -0.2
CMTM1-211ENST00000528484 CSF2RAP15509 400 aa13.78□□□□□ -0.2
CMTM1-211ENST00000528484 GNAT2P19087 354 aa13.78□□□□□ -0.2
CMTM1-211ENST00000528484 RASA1P20936 1047 aa13.78□□□□□ -0.2
CMTM1-211ENST00000528484 IGFBP4P22692 258 aa13.78□□□□□ -0.2
CMTM1-211ENST00000528484 CDK7P50613 346 aa13.78□□□□□ -0.2
CMTM1-211ENST00000528484 USP38Q8NB14 1042 aa13.78□□□□□ -0.2
CMTM1-211ENST00000528484 SEZ6LQ9BYH1 1024 aa13.78□□□□□ -0.2
CMTM1-211ENST00000528484 PUS7LQ9H0K6 701 aaKnown RBP13.78□□□□□ -0.2
CMTM1-211ENST00000528484 AP5M1Q9H0R1 490 aa13.78□□□□□ -0.2
CMTM1-211ENST00000528484 UPF3AQ9H1J1 476 aaKnown RBP13.78□□□□□ -0.2
CMTM1-211ENST00000528484 PRDM12Q9H4Q4 367 aa13.78□□□□□ -0.2
CMTM1-211ENST00000528484 SLC28A3Q9HAS3 691 aa13.78□□□□□ -0.2
CMTM1-211ENST00000528484 SLC38A10Q9HBR0 1119 aa13.78□□□□□ -0.2
CMTM1-211ENST00000528484 IL23AQ9NPF7 189 aa13.78□□□□□ -0.2
CMTM1-211ENST00000528484 SYNPO2Q9UMS6 1093 aa13.78□□□□□ -0.2
CMTM1-211ENST00000528484 RIPK3Q9Y572 518 aa13.78□□□□□ -0.2
CMTM1-211ENST00000528484 ASB14A6NK59 587 aa13.77□□□□□ -0.21
CMTM1-211ENST00000528484 SMIM22K7EJ46 135 aa13.77□□□□□ -0.21
CMTM1-211ENST00000528484 TTLL1O95922 423 aa13.77□□□□□ -0.21
CMTM1-211ENST00000528484 MRPS5P82675 430 aaKnown RBP13.77□□□□□ -0.21
CMTM1-211ENST00000528484 TNFAIP2Q03169 654 aa13.77□□□□□ -0.21
CMTM1-211ENST00000528484 PPP4R3BQ5MIZ7 849 aa13.77□□□□□ -0.21
CMTM1-211ENST00000528484 ZNF365Q70YC5 407 aa13.77□□□□□ -0.21
CMTM1-211ENST00000528484 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.77□□□□□ -0.21
CMTM1-211ENST00000528484 FAM126BQ8IXS8 530 aa13.77□□□□□ -0.21
CMTM1-211ENST00000528484 CCDC144CPQ8IYA2 1237 aa13.77□□□□□ -0.21
CMTM1-211ENST00000528484 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.77□□□□□ -0.21
CMTM1-211ENST00000528484 NACAP1Q9BZK3 213 aa13.77□□□□□ -0.21
CMTM1-211ENST00000528484 HIPK3Q9H422 1215 aa13.77□□□□□ -0.21
CMTM1-211ENST00000528484 ACAD9Q9H845 621 aa13.77□□□□□ -0.21
CMTM1-211ENST00000528484 HOMER2Q9NSB8 354 aa13.77□□□□□ -0.21
CMTM1-211ENST00000528484 COG6Q9Y2V7 657 aa13.77□□□□□ -0.21
CMTM1-211ENST00000528484 MYH4Q9Y623 1939 aa13.77□□□□□ -0.21
CMTM1-211ENST00000528484 XIRP2A4UGR9 3374 aa13.77□□□□□ -0.21
CMTM1-211ENST00000528484 FGBP02675 491 aa13.76□□□□□ -0.21
CMTM1-211ENST00000528484 ZFYP08048 801 aaPredicted RBP13.76□□□□□ -0.21
CMTM1-211ENST00000528484 ACRP10323 421 aa13.76□□□□□ -0.21
CMTM1-211ENST00000528484 BMP3P12645 472 aa13.76□□□□□ -0.21
CMTM1-211ENST00000528484 PBX2P40425 430 aa13.76□□□□□ -0.21
CMTM1-211ENST00000528484 STAT2P52630 851 aa13.76□□□□□ -0.21
CMTM1-211ENST00000528484 PDE4BQ07343 736 aa13.76□□□□□ -0.21
CMTM1-211ENST00000528484 RPUSD2Q8IZ73 545 aaKnown RBP13.76□□□□□ -0.21
CMTM1-211ENST00000528484 GMCL1P1Q8NEA9 526 aa13.76□□□□□ -0.21
CMTM1-211ENST00000528484 CHURC1Q8WUH1 139 aa13.76□□□□□ -0.21
CMTM1-211ENST00000528484 ASB2Q96Q27 587 aa13.76□□□□□ -0.21
CMTM1-211ENST00000528484 STRBPQ96SI9 672 aaKnown RBP13.76□□□□□ -0.21
CMTM1-211ENST00000528484 ZBTB40Q9NUA8 1239 aa13.76□□□□□ -0.21
CMTM1-211ENST00000528484 MCM3APO60318 1980 aa13.76□□□□□ -0.21
CMTM1-211ENST00000528484 CHD9Q3L8U1 2897 aa13.76□□□□□ -0.21
CMTM1-211ENST00000528484 GREB1LQ9C091 1923 aaPredicted RBP13.75□□□□□ -0.21
CMTM1-211ENST00000528484 GRXCR1A8MXD5 290 aa13.75□□□□□ -0.21
CMTM1-211ENST00000528484 TSPY3P0CV98 308 aa13.75□□□□□ -0.21
CMTM1-211ENST00000528484 TSPY8P0CW00 308 aa13.75□□□□□ -0.21
CMTM1-211ENST00000528484 COL9A1P20849 921 aa13.75□□□□□ -0.21
CMTM1-211ENST00000528484 CYP2C18P33260 490 aa13.75□□□□□ -0.21
CMTM1-211ENST00000528484 TKFCQ3LXA3 575 aa13.75□□□□□ -0.21
CMTM1-211ENST00000528484 RASIP1Q5U651 963 aa13.75□□□□□ -0.21
CMTM1-211ENST00000528484 SLFN13Q68D06 897 aa13.75□□□□□ -0.21
CMTM1-211ENST00000528484 TLK2Q86UE8 772 aa13.75□□□□□ -0.21
CMTM1-211ENST00000528484 FAM160B2Q86V87 743 aa13.75□□□□□ -0.21
CMTM1-211ENST00000528484 LRRC47Q8N1G4 583 aaKnown RBP13.75□□□□□ -0.21
CMTM1-211ENST00000528484 HERVK_113Q902F9 699 aa13.75□□□□□ -0.21
CMTM1-211ENST00000528484 APPBP2Q92624 585 aa13.75□□□□□ -0.21
CMTM1-211ENST00000528484 MKL1Q969V6 931 aa13.75□□□□□ -0.21
CMTM1-211ENST00000528484 CEP95Q96GE4 821 aa13.75□□□□□ -0.21
CMTM1-211ENST00000528484 ECHDC1Q9NTX5 307 aa13.75□□□□□ -0.21
CMTM1-211ENST00000528484 MTMR4Q9NYA4 1195 aa13.75□□□□□ -0.21
CMTM1-211ENST00000528484 GSG1L2A8MUP6 293 aa13.74□□□□□ -0.21
CMTM1-211ENST00000528484 TMEM232C9JQI7 657 aa13.74□□□□□ -0.21
CMTM1-211ENST00000528484 GPAA1O43292 621 aa13.74□□□□□ -0.21
CMTM1-211ENST00000528484 CHGBP05060 677 aa13.74□□□□□ -0.21
CMTM1-211ENST00000528484 ITGA7Q13683 1181 aa13.74□□□□□ -0.21
CMTM1-211ENST00000528484 CCDC85BQ15834 202 aaPredicted RBP13.74□□□□□ -0.21
CMTM1-211ENST00000528484 FSCN1Q16658 493 aaKnown RBP13.74□□□□□ -0.21
CMTM1-211ENST00000528484 AAK1Q2M2I8 961 aa13.74□□□□□ -0.21
CMTM1-211ENST00000528484 CXCL17Q6UXB2 119 aa13.74□□□□□ -0.21
CMTM1-211ENST00000528484 C16orf59Q7L2K0 433 aa13.74□□□□□ -0.21
CMTM1-211ENST00000528484 KBTBD3Q8NAB2 608 aa13.74□□□□□ -0.21
CMTM1-211ENST00000528484 UHRF1Q96T88 793 aaPredicted RBP13.74□□□□□ -0.21
CMTM1-211ENST00000528484 RNF146Q9NTX7 359 aa13.74□□□□□ -0.21
CMTM1-211ENST00000528484 SLC4A7Q9Y6M7 1214 aa13.74□□□□□ -0.21
CMTM1-211ENST00000528484 CHD7Q9P2D1 2997 aa13.74□□□□□ -0.21
CMTM1-211ENST00000528484 NCOR1O75376 2440 aa13.73□□□□□ -0.21
CMTM1-211ENST00000528484 ZBBXA8MT70 800 aa13.73□□□□□ -0.21
CMTM1-211ENST00000528484 PRDM1O75626 825 aa13.73□□□□□ -0.21
CMTM1-211ENST00000528484 CD4P01730 458 aa13.73□□□□□ -0.21
CMTM1-211ENST00000528484 SLC1A4P43007 532 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms