RNA–Protein interactions for RNA: ENST00000528439.5

RPS3-210, Transcript of ribosomal protein S3, humanhuman

TSL 3

Gene RPS3, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-210ENST00000528439 SP7Q8TDD2 431 aaPredicted RBP11.54□□□□□ -0.56
RPS3-210ENST00000528439 ZMYND12Q9H0C1 365 aa11.54□□□□□ -0.56
RPS3-210ENST00000528439 RPAP3Q9H6T3 665 aaPredicted RBP11.54□□□□□ -0.56
RPS3-210ENST00000528439 ELP3Q9H9T3 547 aa11.54□□□□□ -0.56
RPS3-210ENST00000528439 AS3MTQ9HBK9 375 aa11.54□□□□□ -0.56
RPS3-210ENST00000528439 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.54□□□□□ -0.56
RPS3-210ENST00000528439 PCDHA4Q9UN74 947 aa11.54□□□□□ -0.56
RPS3-210ENST00000528439 CLIC4Q9Y696 253 aa11.54□□□□□ -0.56
RPS3-210ENST00000528439 A0A0G2JMZ2 1700 aa11.53□□□□□ -0.56
RPS3-210ENST00000528439 SPDYE5A6NIY4 337 aa11.53□□□□□ -0.56
RPS3-210ENST00000528439 GOLGA6L22H0YM25 854 aa11.53□□□□□ -0.56
RPS3-210ENST00000528439 PLA2G6O60733 806 aa11.53□□□□□ -0.56
RPS3-210ENST00000528439 CALML3P27482 149 aa11.53□□□□□ -0.56
RPS3-210ENST00000528439 GJA5P36382 358 aa11.53□□□□□ -0.56
RPS3-210ENST00000528439 NASPP49321 788 aaPredicted RBP11.53□□□□□ -0.56
RPS3-210ENST00000528439 GNL2Q13823 731 aaKnown RBP11.53□□□□□ -0.56
RPS3-210ENST00000528439 TTLL12Q14166 644 aaPredicted RBP11.53□□□□□ -0.56
RPS3-210ENST00000528439 LDLRAD1Q5T700 205 aa11.53□□□□□ -0.56
RPS3-210ENST00000528439 PPP1R18Q6NYC8 613 aa11.53□□□□□ -0.56
RPS3-210ENST00000528439 GPT2Q8TD30 523 aa11.53□□□□□ -0.56
RPS3-210ENST00000528439 KIFC2Q96AC6 838 aa11.53□□□□□ -0.56
RPS3-210ENST00000528439 RANBP17Q9H2T7 1088 aaKnown RBP11.53□□□□□ -0.56
RPS3-210ENST00000528439 ZNF408Q9H9D4 720 aa11.53□□□□□ -0.56
RPS3-210ENST00000528439 RTEL1Q9NZ71 1219 aa11.53□□□□□ -0.56
RPS3-210ENST00000528439 FEM1BQ9UK73 627 aa11.53□□□□□ -0.56
RPS3-210ENST00000528439 CSADQ9Y600 493 aa11.53□□□□□ -0.56
RPS3-210ENST00000528439 SMCHD1A6NHR9 2005 aa11.53□□□□□ -0.56
RPS3-210ENST00000528439 SMCO2A6NFE2 343 aa11.52□□□□□ -0.57
RPS3-210ENST00000528439 OPLAHO14841 1288 aa11.52□□□□□ -0.57
RPS3-210ENST00000528439 USP14P54578 494 aa11.52□□□□□ -0.57
RPS3-210ENST00000528439 PTPAQ15257 358 aa11.52□□□□□ -0.57
RPS3-210ENST00000528439 SH3D19Q5HYK7 790 aa11.52□□□□□ -0.57
RPS3-210ENST00000528439 ANO1Q5XXA6 986 aa11.52□□□□□ -0.57
RPS3-210ENST00000528439 PIK3AP1Q6ZUJ8 805 aa11.52□□□□□ -0.57
RPS3-210ENST00000528439 FAM160B2Q86V87 743 aa11.52□□□□□ -0.57
RPS3-210ENST00000528439 ANKRD13AQ8IZ07 590 aa11.52□□□□□ -0.57
RPS3-210ENST00000528439 FAM177A1Q8N128 213 aaPredicted RBP11.52□□□□□ -0.57
RPS3-210ENST00000528439 LINC00301Q8NCQ3 95 aa11.52□□□□□ -0.57
RPS3-210ENST00000528439 OTUD5Q96G74 571 aa11.52□□□□□ -0.57
RPS3-210ENST00000528439 WNK4Q96J92 1243 aa11.52□□□□□ -0.57
RPS3-210ENST00000528439 PGBD1Q96JS3 809 aa11.52□□□□□ -0.57
RPS3-210ENST00000528439 SPATA32Q96LK8 384 aa11.52□□□□□ -0.57
RPS3-210ENST00000528439 ZNF396Q96N95 335 aaPredicted RBP11.52□□□□□ -0.57
RPS3-210ENST00000528439 TANGO6Q9C0B7 1094 aa11.52□□□□□ -0.57
RPS3-210ENST00000528439 BRMS1Q9HCU9 246 aa11.52□□□□□ -0.57
RPS3-210ENST00000528439 POLR3EQ9NVU0 708 aa11.52□□□□□ -0.57
RPS3-210ENST00000528439 TMEM260Q9NX78 707 aa11.52□□□□□ -0.57
RPS3-210ENST00000528439 RCOR1Q9UKL0 485 aa11.52□□□□□ -0.57
RPS3-210ENST00000528439 PCDHA6Q9UN73 950 aa11.52□□□□□ -0.57
RPS3-210ENST00000528439 PCDHA8Q9Y5H6 950 aa11.52□□□□□ -0.57
RPS3-210ENST00000528439 ZNF536O15090 1300 aa11.52□□□□□ -0.57
RPS3-210ENST00000528439 ELP1O95163 1332 aa11.52□□□□□ -0.57
RPS3-210ENST00000528439 COL11A1P12107 1806 aaPredicted RBP11.51□□□□□ -0.57
RPS3-210ENST00000528439 C19orf81C9J6K1 198 aa11.51□□□□□ -0.57
RPS3-210ENST00000528439 IRF6O14896 467 aa11.51□□□□□ -0.57
RPS3-210ENST00000528439 TRAK2O60296 914 aa11.51□□□□□ -0.57
RPS3-210ENST00000528439 CLK2P49760 499 aaKnown RBP11.51□□□□□ -0.57
RPS3-210ENST00000528439 ADCY7P51828 1080 aa11.51□□□□□ -0.57
RPS3-210ENST00000528439 FSTL1Q12841 308 aa11.51□□□□□ -0.57
RPS3-210ENST00000528439 SF3A1Q15459 793 aaKnown RBP11.51□□□□□ -0.57
RPS3-210ENST00000528439 UBE2SQ16763 222 aa11.51□□□□□ -0.57
RPS3-210ENST00000528439 USH1GQ495M9 461 aa11.51□□□□□ -0.57
RPS3-210ENST00000528439 ATL3Q6DD88 541 aa11.51□□□□□ -0.57
RPS3-210ENST00000528439 GALNT17Q6IS24 598 aa11.51□□□□□ -0.57
RPS3-210ENST00000528439 CCDC174Q6PII3 467 aa11.51□□□□□ -0.57
RPS3-210ENST00000528439 SAMD1Q6SPF0 538 aaPredicted RBP11.51□□□□□ -0.57
RPS3-210ENST00000528439 ARMC9Q7Z3E5 817 aa11.51□□□□□ -0.57
RPS3-210ENST00000528439 FBXO11Q86XK2 927 aa11.51□□□□□ -0.57
RPS3-210ENST00000528439 ERO1BQ86YB8 467 aa11.51□□□□□ -0.57
RPS3-210ENST00000528439 CCDC12Q8WUD4 166 aaPredicted RBP11.51□□□□□ -0.57
RPS3-210ENST00000528439 CHURC1Q8WUH1 139 aa11.51□□□□□ -0.57
RPS3-210ENST00000528439 P2RX7Q99572 595 aaKnown RBP11.51□□□□□ -0.57
RPS3-210ENST00000528439 SLF1Q9BQI6 1058 aa11.51□□□□□ -0.57
RPS3-210ENST00000528439 SCAND2PQ9GZW5 306 aaPredicted RBP11.51□□□□□ -0.57
RPS3-210ENST00000528439 PPP1R9AQ9ULJ8 1098 aa11.51□□□□□ -0.57
RPS3-210ENST00000528439 PCDHB6Q9Y5E3 794 aa11.51□□□□□ -0.57
RPS3-210ENST00000528439 PCDHA1Q9Y5I3 950 aa11.51□□□□□ -0.57
RPS3-210ENST00000528439 RBBP6Q7Z6E9 1792 aaKnown RBP11.51□□□□□ -0.57
RPS3-210ENST00000528439 A0A0G2JLL6 359 aaPredicted RBP11.5□□□□□ -0.57
RPS3-210ENST00000528439 FLOT1O75955 427 aa11.5□□□□□ -0.57
RPS3-210ENST00000528439 YEATS4O95619 227 aa11.5□□□□□ -0.57
RPS3-210ENST00000528439 ITGBL1O95965 494 aaPredicted RBP11.5□□□□□ -0.57
RPS3-210ENST00000528439 PPATQ06203 517 aa11.5□□□□□ -0.57
RPS3-210ENST00000528439 MOGSQ13724 837 aa11.5□□□□□ -0.57
RPS3-210ENST00000528439 TPRNQ4KMQ1 711 aa11.5□□□□□ -0.57
RPS3-210ENST00000528439 TREML2Q5T2D2 321 aa11.5□□□□□ -0.57
RPS3-210ENST00000528439 PRRT2Q7Z6L0 340 aaPredicted RBP11.5□□□□□ -0.57
RPS3-210ENST00000528439 REXO1Q8N1G1 1221 aaKnown RBP11.5□□□□□ -0.57
RPS3-210ENST00000528439 REPS2Q8NFH8 660 aa11.5□□□□□ -0.57
RPS3-210ENST00000528439 OPTNQ96CV9 577 aa11.5□□□□□ -0.57
RPS3-210ENST00000528439 ATG4CQ96DT6 458 aa11.5□□□□□ -0.57
RPS3-210ENST00000528439 AMNQ9BXJ7 453 aa11.5□□□□□ -0.57
RPS3-210ENST00000528439 C6orf50Q9HD87 102 aa11.5□□□□□ -0.57
RPS3-210ENST00000528439 RIC8AQ9NPQ8 531 aa11.5□□□□□ -0.57
RPS3-210ENST00000528439 BIN2Q9UBW5 565 aaPredicted RBP11.5□□□□□ -0.57
RPS3-210ENST00000528439 CFAP45Q9UL16 551 aa11.5□□□□□ -0.57
RPS3-210ENST00000528439 KCNH4Q9UQ05 1017 aa11.5□□□□□ -0.57
RPS3-210ENST00000528439 MRVI1Q9Y6F6 885 aa11.5□□□□□ -0.57
RPS3-210ENST00000528439 TRPM7Q96QT4 1865 aa11.5□□□□□ -0.57
RPS3-210ENST00000528439 EDIL3O43854 480 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms