RNA–Protein interactions for RNA: ENST00000528302.5

SF3B2-206, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5 BASIC

Gene SF3B2, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-206ENST00000528302 SH2D3CQ8N5H7 860 aa11.04□□□□□ -0.64
SF3B2-206ENST00000528302 CCDC155Q8N6L0 562 aa11.04□□□□□ -0.64
SF3B2-206ENST00000528302 MSANTD4Q8NCY6 345 aa11.04□□□□□ -0.64
SF3B2-206ENST00000528302 SPATA20Q8TB22 786 aa11.04□□□□□ -0.64
SF3B2-206ENST00000528302 TANGO6Q9C0B7 1094 aa11.04□□□□□ -0.64
SF3B2-206ENST00000528302 ASIC1P78348 528 aa11.04□□□□□ -0.64
SF3B2-206ENST00000528302 NKX1-1Q15270 411 aaPredicted RBP11.04□□□□□ -0.64
SF3B2-206ENST00000528302 IRF2BP1Q8IU81 584 aa11.04□□□□□ -0.64
SF3B2-206ENST00000528302 COG1Q8WTW3 980 aa11.04□□□□□ -0.64
SF3B2-206ENST00000528302 SLC39A2Q9NP94 309 aa11.04□□□□□ -0.64
SF3B2-206ENST00000528302 RAB21Q9UL25 225 aa11.04□□□□□ -0.64
SF3B2-206ENST00000528302 KCPQ6ZWJ8 1503 aa11.03□□□□□ -0.64
SF3B2-206ENST00000528302 CCDC194A0A1B0GVG4 234 aa11.03□□□□□ -0.64
SF3B2-206ENST00000528302 MYO1BO43795 1136 aa11.03□□□□□ -0.64
SF3B2-206ENST00000528302 SYF2O95926 243 aaKnown RBP11.03□□□□□ -0.64
SF3B2-206ENST00000528302 CRKLP46109 303 aaKnown RBP11.03□□□□□ -0.64
SF3B2-206ENST00000528302 SEC23AQ15436 765 aa11.03□□□□□ -0.64
SF3B2-206ENST00000528302 DDB1Q16531 1140 aa11.03□□□□□ -0.64
SF3B2-206ENST00000528302 LETM2Q2VYF4 491 aa11.03□□□□□ -0.64
SF3B2-206ENST00000528302 NFRKBQ6P4R8 1299 aa11.03□□□□□ -0.64
SF3B2-206ENST00000528302 C2CD5Q86YS7 1000 aa11.03□□□□□ -0.64
SF3B2-206ENST00000528302 TMTC2Q8N394 836 aa11.03□□□□□ -0.64
SF3B2-206ENST00000528302 MB21D1Q8N884 522 aa11.03□□□□□ -0.64
SF3B2-206ENST00000528302 SLC44A5Q8NCS7 719 aa11.03□□□□□ -0.64
SF3B2-206ENST00000528302 IFT81Q8WYA0 676 aa11.03□□□□□ -0.64
SF3B2-206ENST00000528302 SELENOOQ9BVL4 669 aa11.03□□□□□ -0.64
SF3B2-206ENST00000528302 ZNHIT6Q9NWK9 470 aaKnown RBP11.03□□□□□ -0.64
SF3B2-206ENST00000528302 DMGDHQ9UI17 866 aaKnown RBP11.03□□□□□ -0.64
SF3B2-206ENST00000528302 POTEB2H3BUK9 544 aa11.03□□□□□ -0.64
SF3B2-206ENST00000528302 TTC31Q49AM3 519 aaPredicted RBP11.03□□□□□ -0.64
SF3B2-206ENST00000528302 WDR59Q6PJI9 974 aa11.03□□□□□ -0.64
SF3B2-206ENST00000528302 FAM71BQ8TC56 605 aa11.03□□□□□ -0.64
SF3B2-206ENST00000528302 FERMT2Q96AC1 680 aa11.03□□□□□ -0.64
SF3B2-206ENST00000528302 MS4A14Q96JA4 679 aa11.03□□□□□ -0.64
SF3B2-206ENST00000528302 TUBGCP2Q9BSJ2 902 aa11.03□□□□□ -0.64
SF3B2-206ENST00000528302 LRRC1Q9BTT6 524 aa11.03□□□□□ -0.64
SF3B2-206ENST00000528302 GBP3Q9H0R5 595 aa11.03□□□□□ -0.64
SF3B2-206ENST00000528302 NHEJ1Q9H9Q4 299 aaPredicted RBP11.03□□□□□ -0.64
SF3B2-206ENST00000528302 MCM9Q9NXL9 1143 aa11.03□□□□□ -0.64
SF3B2-206ENST00000528302 LOC102724159A0A0B4J2E5 919 aa11.03□□□□□ -0.64
SF3B2-206ENST00000528302 USP17L3A6NCW0 530 aa11.03□□□□□ -0.64
SF3B2-206ENST00000528302 USP17L4A6NCW7 530 aa11.03□□□□□ -0.64
SF3B2-206ENST00000528302 ZSCAN5CA6NGD5 496 aaPredicted RBP11.03□□□□□ -0.64
SF3B2-206ENST00000528302 USP17L8P0C7I0 530 aa11.03□□□□□ -0.64
SF3B2-206ENST00000528302 USP14P54578 494 aa11.03□□□□□ -0.64
SF3B2-206ENST00000528302 PDE4DQ08499 809 aa11.03□□□□□ -0.64
SF3B2-206ENST00000528302 TROAPQ12815 778 aa11.03□□□□□ -0.64
SF3B2-206ENST00000528302 PWP2Q15269 919 aaKnown RBP11.03□□□□□ -0.64
SF3B2-206ENST00000528302 PDXDC2PQ6P474 469 aa11.03□□□□□ -0.64
SF3B2-206ENST00000528302 USP17L1Q7RTZ2 530 aa11.03□□□□□ -0.64
SF3B2-206ENST00000528302 SH3RF1Q7Z6J0 888 aa11.03□□□□□ -0.64
SF3B2-206ENST00000528302 GJA10Q969M2 543 aa11.03□□□□□ -0.64
SF3B2-206ENST00000528302 NOC4LQ9BVI4 516 aaKnown RBP11.03□□□□□ -0.64
SF3B2-206ENST00000528302 ACBD3Q9H3P7 528 aa11.03□□□□□ -0.64
SF3B2-206ENST00000528302 KAT14Q9H8E8 782 aa11.03□□□□□ -0.64
SF3B2-206ENST00000528302 NLRC4Q9NPP4 1024 aa11.03□□□□□ -0.64
SF3B2-206ENST00000528302 HPCAL4Q9UM19 191 aa11.03□□□□□ -0.64
SF3B2-206ENST00000528302 GOLGA6CA6NDK9 693 aa11.02□□□□□ -0.65
SF3B2-206ENST00000528302 GTPBP6O43824 516 aaPredicted RBP11.02□□□□□ -0.65
SF3B2-206ENST00000528302 SSBP05455 408 aaKnown RBP eCLIP11.02□□□□□ -0.65
SF3B2-206ENST00000528302 GOLGA6DP0CG33 693 aa11.02□□□□□ -0.65
SF3B2-206ENST00000528302 SCG2P13521 617 aa11.02□□□□□ -0.65
SF3B2-206ENST00000528302 FGFR2P21802 821 aa11.02□□□□□ -0.65
SF3B2-206ENST00000528302 GUCY2FP51841 1108 aa11.02□□□□□ -0.65
SF3B2-206ENST00000528302 GTF2A1P52655 376 aaPredicted RBP11.02□□□□□ -0.65
SF3B2-206ENST00000528302 ITPK1Q13572 414 aa11.02□□□□□ -0.65
SF3B2-206ENST00000528302 LRRC41Q15345 812 aa11.02□□□□□ -0.65
SF3B2-206ENST00000528302 CCDC181Q5TID7 509 aa11.02□□□□□ -0.65
SF3B2-206ENST00000528302 ZNF658Q5TYW1 1059 aaPredicted RBP11.02□□□□□ -0.65
SF3B2-206ENST00000528302 C3orf67Q6ZVT6 689 aa11.02□□□□□ -0.65
SF3B2-206ENST00000528302 CCDC42Q96M95 316 aa11.02□□□□□ -0.65
SF3B2-206ENST00000528302 GOLGA6AQ9NYA3 693 aa11.02□□□□□ -0.65
SF3B2-206ENST00000528302 TBC1D7Q9P0N9 293 aa11.02□□□□□ -0.65
SF3B2-206ENST00000528302 RWDD2AQ9UIY3 292 aa11.02□□□□□ -0.65
SF3B2-206ENST00000528302 PACSIN2Q9UNF0 486 aaPredicted RBP11.02□□□□□ -0.65
SF3B2-206ENST00000528302 CAPN6Q9Y6Q1 641 aa11.02□□□□□ -0.65
SF3B2-206ENST00000528302 GOLGA6BA6NDN3 693 aa11.02□□□□□ -0.65
SF3B2-206ENST00000528302 AKR1B10O60218 316 aa11.02□□□□□ -0.65
SF3B2-206ENST00000528302 IVLP07476 585 aa11.02□□□□□ -0.65
SF3B2-206ENST00000528302 PRDX5P30044 214 aa11.02□□□□□ -0.65
SF3B2-206ENST00000528302 ATP2C1P98194 919 aaPredicted RBP11.02□□□□□ -0.65
SF3B2-206ENST00000528302 AMPD2Q01433 879 aa11.02□□□□□ -0.65
SF3B2-206ENST00000528302 APBA1Q02410 837 aa11.02□□□□□ -0.65
SF3B2-206ENST00000528302 ALX1Q15699 326 aa11.02□□□□□ -0.65
SF3B2-206ENST00000528302 NPY5RQ15761 445 aa11.02□□□□□ -0.65
SF3B2-206ENST00000528302 FAM98CQ17RN3 349 aaKnown RBP11.02□□□□□ -0.65
SF3B2-206ENST00000528302 DTHD1Q6ZMT9 781 aa11.02□□□□□ -0.65
SF3B2-206ENST00000528302 LIMA1Q9UHB6 759 aaKnown RBP11.02□□□□□ -0.65
SF3B2-206ENST00000528302 SAP30BPQ9UHR5 308 aaKnown RBP11.02□□□□□ -0.65
SF3B2-206ENST00000528302 MROH5Q6ZUA9 1318 aa11.01□□□□□ -0.65
SF3B2-206ENST00000528302 EPHB6O15197 1021 aa11.01□□□□□ -0.65
SF3B2-206ENST00000528302 KRT86O43790 486 aa11.01□□□□□ -0.65
SF3B2-206ENST00000528302 TECP42680 631 aa11.01□□□□□ -0.65
SF3B2-206ENST00000528302 STK4Q13043 487 aa11.01□□□□□ -0.65
SF3B2-206ENST00000528302 TRIM28Q13263 835 aaKnown RBP11.01□□□□□ -0.65
SF3B2-206ENST00000528302 TDRD12Q587J7 1177 aaKnown RBP11.01□□□□□ -0.65
SF3B2-206ENST00000528302 TMTC3Q6ZXV5 915 aa11.01□□□□□ -0.65
SF3B2-206ENST00000528302 CCDC125Q86Z20 511 aa11.01□□□□□ -0.65
SF3B2-206ENST00000528302 SGSM3Q96HU1 749 aa11.01□□□□□ -0.65
SF3B2-206ENST00000528302 PSMA7O14818 248 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms