RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 DPEP1P16444 411 aa16.81■□□□□ 0.28
USP47-207ENST00000527733 APBB1IPQ7Z5R6 666 aaPredicted RBP16.81■□□□□ 0.28
USP47-207ENST00000527733 GCNT3O95395 438 aa16.81■□□□□ 0.28
USP47-207ENST00000527733 NOLC1Q14978 699 aaKnown RBP eCLIP16.81■□□□□ 0.28
USP47-207ENST00000527733 IGSF22Q8N9C0 903 aa16.81■□□□□ 0.28
USP47-207ENST00000527733 FTOQ9C0B1 505 aaKnown RBP eCLIP16.81■□□□□ 0.28
USP47-207ENST00000527733 APOBEC3FQ8IUX4 373 aaKnown RBP16.8■□□□□ 0.28
USP47-207ENST00000527733 FMNL3Q8IVF7 1028 aa16.8■□□□□ 0.28
USP47-207ENST00000527733 AKR1B15C9JRZ8 316 aaPredicted RBP16.8■□□□□ 0.28
USP47-207ENST00000527733 KIF2CQ99661 725 aa16.8■□□□□ 0.28
USP47-207ENST00000527733 PLSCR1O15162 318 aa16.8■□□□□ 0.28
USP47-207ENST00000527733 HARSP12081 509 aaKnown RBP16.8■□□□□ 0.28
USP47-207ENST00000527733 NELFCDQ8IXH7 590 aa16.8■□□□□ 0.28
USP47-207ENST00000527733 GBP3Q9H0R5 595 aa16.8■□□□□ 0.28
USP47-207ENST00000527733 OSBPL5Q9H0X9 879 aaPredicted RBP16.8■□□□□ 0.28
USP47-207ENST00000527733 MAGEF1Q9HAY2 307 aa16.8■□□□□ 0.28
USP47-207ENST00000527733 MON2Q7Z3U7 1717 aa16.8■□□□□ 0.28
USP47-207ENST00000527733 EEF2P13639 858 aaKnown RBP16.8■□□□□ 0.28
USP47-207ENST00000527733 DNM2P50570 870 aa16.8■□□□□ 0.28
USP47-207ENST00000527733 PFKFB3Q16875 520 aaPredicted RBP16.8■□□□□ 0.28
USP47-207ENST00000527733 CCDC125Q86Z20 511 aa16.8■□□□□ 0.28
USP47-207ENST00000527733 FGFR2P21802 821 aa16.79■□□□□ 0.28
USP47-207ENST00000527733 OSBPP22059 807 aa16.79■□□□□ 0.28
USP47-207ENST00000527733 KIF5AQ12840 1032 aa16.79■□□□□ 0.28
USP47-207ENST00000527733 TRIM14Q14142 442 aa16.79■□□□□ 0.28
USP47-207ENST00000527733 TRMT44Q8IYL2 757 aaKnown RBP16.79■□□□□ 0.28
USP47-207ENST00000527733 CUEDC2Q9H467 287 aa16.79■□□□□ 0.28
USP47-207ENST00000527733 JADE2Q9NQC1 790 aa16.79■□□□□ 0.28
USP47-207ENST00000527733 FLT1P17948 1338 aa16.79■□□□□ 0.28
USP47-207ENST00000527733 GOLGA6L10A6NI86 522 aa16.79■□□□□ 0.28
USP47-207ENST00000527733 GRM4Q14833 912 aa16.79■□□□□ 0.28
USP47-207ENST00000527733 KARSQ15046 597 aaKnown RBP16.79■□□□□ 0.28
USP47-207ENST00000527733 LRCH2Q5VUJ6 765 aa16.79■□□□□ 0.28
USP47-207ENST00000527733 PGBD1Q96JS3 809 aa16.79■□□□□ 0.28
USP47-207ENST00000527733 RABGAP1Q9Y3P9 1069 aa16.79■□□□□ 0.28
USP47-207ENST00000527733 SLIT3O75094 1523 aa16.79■□□□□ 0.28
USP47-207ENST00000527733 ANKRD62A6NC57 917 aa16.79■□□□□ 0.28
USP47-207ENST00000527733 SRGNP10124 158 aa16.79■□□□□ 0.28
USP47-207ENST00000527733 ZNF75DP51815 510 aa16.79■□□□□ 0.28
USP47-207ENST00000527733 WRNIP1Q96S55 665 aa16.79■□□□□ 0.28
USP47-207ENST00000527733 ZBTB5O15062 677 aa16.78■□□□□ 0.28
USP47-207ENST00000527733 IWS1Q96ST2 819 aa16.78■□□□□ 0.28
USP47-207ENST00000527733 GJB4Q9NTQ9 266 aa16.78■□□□□ 0.28
USP47-207ENST00000527733 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.78■□□□□ 0.28
USP47-207ENST00000527733 NRXN3Q9Y4C0 1643 aa16.78■□□□□ 0.28
USP47-207ENST00000527733 KRT86O43790 486 aa16.78■□□□□ 0.28
USP47-207ENST00000527733 AKR1B1P15121 316 aa16.78■□□□□ 0.28
USP47-207ENST00000527733 CDC27P30260 824 aa16.78■□□□□ 0.28
USP47-207ENST00000527733 BIRC3Q13489 604 aa16.78■□□□□ 0.28
USP47-207ENST00000527733 TIGD1Q96MW7 591 aa16.78■□□□□ 0.28
USP47-207ENST00000527733 EXOC3O60645 756 aa16.78■□□□□ 0.28
USP47-207ENST00000527733 EIF3JO75822 258 aaKnown RBP16.78■□□□□ 0.28
USP47-207ENST00000527733 KLRK1P26718 216 aa16.78■□□□□ 0.28
USP47-207ENST00000527733 CYP4A11Q02928 519 aa16.78■□□□□ 0.28
USP47-207ENST00000527733 RCSD1Q6JBY9 416 aa16.78■□□□□ 0.28
USP47-207ENST00000527733 NOD1Q9Y239 953 aa16.78■□□□□ 0.28
USP47-207ENST00000527733 PCDHB6Q9Y5E3 794 aa16.78■□□□□ 0.28
USP47-207ENST00000527733 PCDHA5Q9Y5H7 936 aa16.78■□□□□ 0.28
USP47-207ENST00000527733 NFAT5O94916 1531 aa16.78■□□□□ 0.28
USP47-207ENST00000527733 F5H6K3 240 aa16.78■□□□□ 0.28
USP47-207ENST00000527733 UBXN2AP68543 259 aa16.78■□□□□ 0.28
USP47-207ENST00000527733 KLRC3Q07444 240 aa16.78■□□□□ 0.28
USP47-207ENST00000527733 RAPGEF1Q13905 1077 aa16.78■□□□□ 0.28
USP47-207ENST00000527733 AXDND1Q5T1B0 1012 aaPredicted RBP16.78■□□□□ 0.28
USP47-207ENST00000527733 MYOCDQ8IZQ8 938 aa16.78■□□□□ 0.28
USP47-207ENST00000527733 WDR11Q9BZH6 1224 aa16.78■□□□□ 0.28
USP47-207ENST00000527733 ADD3Q9UEY8 706 aaKnown RBP16.78■□□□□ 0.28
USP47-207ENST00000527733 GINS2Q9Y248 185 aa16.78■□□□□ 0.28
USP47-207ENST00000527733 PAXBP1Q9Y5B6 917 aa16.78■□□□□ 0.28
USP47-207ENST00000527733 MED1Q15648 1581 aaPredicted RBP16.77■□□□□ 0.28
USP47-207ENST00000527733 MACROD2A1Z1Q3 448 aa16.77■□□□□ 0.28
USP47-207ENST00000527733 TUBB4AP04350 444 aa16.77■□□□□ 0.28
USP47-207ENST00000527733 RSBN1LQ6PCB5 846 aaPredicted RBP16.77■□□□□ 0.28
USP47-207ENST00000527733 SLC10A4Q96EP9 437 aa16.77■□□□□ 0.28
USP47-207ENST00000527733 SYNCQ9H7C4 482 aa16.77■□□□□ 0.28
USP47-207ENST00000527733 LARSQ9P2J5 1176 aaKnown RBP16.77■□□□□ 0.28
USP47-207ENST00000527733 ANKRD26Q9UPS8 1709 aa16.77■□□□□ 0.28
USP47-207ENST00000527733 ENTPD3O75355 529 aa16.77■□□□□ 0.28
USP47-207ENST00000527733 SKIDA1Q1XH10 827 aa16.77■□□□□ 0.28
USP47-207ENST00000527733 CDAN1Q8IWY9 1227 aa16.77■□□□□ 0.28
USP47-207ENST00000527733 BAG1Q99933 345 aaPredicted RBP16.77■□□□□ 0.28
USP47-207ENST00000527733 CPVLQ9H3G5 476 aa16.77■□□□□ 0.28
USP47-207ENST00000527733 PCDHB13Q9Y5F0 798 aa16.77■□□□□ 0.28
USP47-207ENST00000527733 SRPRBQ9Y5M8 271 aaKnown RBP16.77■□□□□ 0.28
USP47-207ENST00000527733 TACC1O75410 805 aa16.77■□□□□ 0.27
USP47-207ENST00000527733 UBE2SQ16763 222 aa16.77■□□□□ 0.27
USP47-207ENST00000527733 XKR9Q5GH70 373 aa16.77■□□□□ 0.27
USP47-207ENST00000527733 BEGAINQ9BUH8 593 aa16.77■□□□□ 0.27
USP47-207ENST00000527733 SRRTQ9BXP5 876 aaKnown RBP16.77■□□□□ 0.27
USP47-207ENST00000527733 TAB2Q9NYJ8 693 aa16.77■□□□□ 0.27
USP47-207ENST00000527733 DNAI1Q9UI46 699 aa16.77■□□□□ 0.27
USP47-207ENST00000527733 KIAA1024Q9UPX6 916 aa16.77■□□□□ 0.27
USP47-207ENST00000527733 GPR75-ASB3A0A0A6YYF3 556 aa16.77■□□□□ 0.27
USP47-207ENST00000527733 NEBLO76041 1014 aa16.77■□□□□ 0.27
USP47-207ENST00000527733 PRPF4BQ13523 1007 aaKnown RBP16.77■□□□□ 0.27
USP47-207ENST00000527733 CDC42EP5Q6NZY7 148 aa16.77■□□□□ 0.27
USP47-207ENST00000527733 GSDMAQ96QA5 445 aa16.77■□□□□ 0.27
USP47-207ENST00000527733 ZNF577Q9BSK1 485 aa16.77■□□□□ 0.27
USP47-207ENST00000527733 IL25Q9H293 177 aa16.77■□□□□ 0.27
USP47-207ENST00000527733 EPB41L4AQ9HCS5 686 aaPredicted RBP16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms