RNA–Protein interactions for RNA: ENST00000527619.5

SOX6-208, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,699 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-208ENST00000527619 PLCD1P51178 756 aa8.32□□□□□ -1.08
SOX6-208ENST00000527619 TEFQ10587 303 aa8.32□□□□□ -1.08
SOX6-208ENST00000527619 POSTNQ15063 836 aa8.32□□□□□ -1.08
SOX6-208ENST00000527619 NAALADL2Q58DX5 795 aa8.32□□□□□ -1.08
SOX6-208ENST00000527619 SLC9C2Q5TAH2 1124 aa8.32□□□□□ -1.08
SOX6-208ENST00000527619 PAPD7Q5XG87 772 aaKnown RBP8.32□□□□□ -1.08
SOX6-208ENST00000527619 IQCEQ6IPM2 695 aa8.32□□□□□ -1.08
SOX6-208ENST00000527619 CYB5D1Q6P9G0 228 aa8.32□□□□□ -1.08
SOX6-208ENST00000527619 APTXQ7Z2E3 356 aaKnown RBP8.32□□□□□ -1.08
SOX6-208ENST00000527619 CCDC114Q96M63 670 aa8.32□□□□□ -1.08
SOX6-208ENST00000527619 CTAGE1Q96RT6 745 aa8.32□□□□□ -1.08
SOX6-208ENST00000527619 TRPV5Q9NQA5 729 aa8.32□□□□□ -1.08
SOX6-208ENST00000527619 HDAC6Q9UBN7 1215 aa8.32□□□□□ -1.08
SOX6-208ENST00000527619 MAP3K15Q6ZN16 1313 aa8.32□□□□□ -1.08
SOX6-208ENST00000527619 HMGB1P1B2RPK0 211 aaPredicted RBP8.31□□□□□ -1.08
SOX6-208ENST00000527619 E7EWF7 191 aa8.31□□□□□ -1.08
SOX6-208ENST00000527619 FOXN1O15353 648 aa8.31□□□□□ -1.08
SOX6-208ENST00000527619 HSF2BPO75031 334 aa8.31□□□□□ -1.08
SOX6-208ENST00000527619 ATP1A1P05023 1023 aaKnown RBP8.31□□□□□ -1.08
SOX6-208ENST00000527619 ERCC5P28715 1186 aaPredicted RBP8.31□□□□□ -1.08
SOX6-208ENST00000527619 FXR1P51114 621 aaKnown RBP eCLIP8.31□□□□□ -1.08
SOX6-208ENST00000527619 IFFO1Q0D2I5 559 aa8.31□□□□□ -1.08
SOX6-208ENST00000527619 PTPAQ15257 358 aa8.31□□□□□ -1.08
SOX6-208ENST00000527619 CDCA2Q69YH5 1023 aaPredicted RBP8.31□□□□□ -1.08
SOX6-208ENST00000527619 KDM7AQ6ZMT4 941 aa8.31□□□□□ -1.08
SOX6-208ENST00000527619 FAM228AQ86W67 206 aa8.31□□□□□ -1.08
SOX6-208ENST00000527619 CCDC65Q8IXS2 484 aa8.31□□□□□ -1.08
SOX6-208ENST00000527619 MAB21L3Q8N8X9 362 aa8.31□□□□□ -1.08
SOX6-208ENST00000527619 CAGE1Q8TC20 777 aa8.31□□□□□ -1.08
SOX6-208ENST00000527619 ARL8AQ96BM9 186 aa8.31□□□□□ -1.08
SOX6-208ENST00000527619 RRP36Q96EU6 259 aaKnown RBP8.31□□□□□ -1.08
SOX6-208ENST00000527619 CAPZA3Q96KX2 299 aa8.31□□□□□ -1.08
SOX6-208ENST00000527619 SLF1Q9BQI6 1058 aa8.31□□□□□ -1.08
SOX6-208ENST00000527619 ABHD10Q9NUJ1 306 aa8.31□□□□□ -1.08
SOX6-208ENST00000527619 ADD3Q9UEY8 706 aaKnown RBP8.31□□□□□ -1.08
SOX6-208ENST00000527619 GUCA1BQ9UMX6 200 aa8.31□□□□□ -1.08
SOX6-208ENST00000527619 ATP8A1Q9Y2Q0 1164 aa8.31□□□□□ -1.08
SOX6-208ENST00000527619 ENC1O14682 589 aa8.31□□□□□ -1.08
SOX6-208ENST00000527619 SRGAP2O75044 1071 aa8.31□□□□□ -1.08
SOX6-208ENST00000527619 ATP5JP18859 108 aa8.31□□□□□ -1.08
SOX6-208ENST00000527619 EIF2S2P20042 333 aaKnown RBP8.31□□□□□ -1.08
SOX6-208ENST00000527619 SARSP49591 514 aaKnown RBP8.31□□□□□ -1.08
SOX6-208ENST00000527619 CCDC121Q6ZUS5 278 aa8.31□□□□□ -1.08
SOX6-208ENST00000527619 FUKQ8N0W3 1084 aa8.31□□□□□ -1.08
SOX6-208ENST00000527619 FBXL16Q8N461 479 aa8.31□□□□□ -1.08
SOX6-208ENST00000527619 RSRC1Q96IZ7 334 aaKnown RBP8.31□□□□□ -1.08
SOX6-208ENST00000527619 MED15Q96RN5 788 aa8.31□□□□□ -1.08
SOX6-208ENST00000527619 BATF3Q9NR55 127 aa8.31□□□□□ -1.08
SOX6-208ENST00000527619 CHPF2Q9P2E5 772 aa8.31□□□□□ -1.08
SOX6-208ENST00000527619 CCDC61Q9Y6R9 512 aa8.31□□□□□ -1.08
SOX6-208ENST00000527619 ADAMTS13Q76LX8 1427 aa8.3□□□□□ -1.08
SOX6-208ENST00000527619 CCDC194A0A1B0GVG4 234 aa8.3□□□□□ -1.08
SOX6-208ENST00000527619 ENO4A6NNW6 628 aa8.3□□□□□ -1.08
SOX6-208ENST00000527619 POM121CA8CG34 1229 aa8.3□□□□□ -1.08
SOX6-208ENST00000527619 MMEP08473 750 aa8.3□□□□□ -1.08
SOX6-208ENST00000527619 KCNA6P17658 529 aa8.3□□□□□ -1.08
SOX6-208ENST00000527619 HOXA10P31260 410 aaPredicted RBP8.3□□□□□ -1.08
SOX6-208ENST00000527619 ATP1A2P50993 1020 aa8.3□□□□□ -1.08
SOX6-208ENST00000527619 PTGISQ16647 500 aa8.3□□□□□ -1.08
SOX6-208ENST00000527619 ZNF827Q17R98 1081 aa8.3□□□□□ -1.08
SOX6-208ENST00000527619 TTC39AQ5SRH9 613 aa8.3□□□□□ -1.08
SOX6-208ENST00000527619 CHST3Q7LGC8 479 aa8.3□□□□□ -1.08
SOX6-208ENST00000527619 ARHGAP22Q7Z5H3 698 aa8.3□□□□□ -1.08
SOX6-208ENST00000527619 NLRP14Q86W24 1093 aa8.3□□□□□ -1.08
SOX6-208ENST00000527619 NUP133Q8WUM0 1156 aa8.3□□□□□ -1.08
SOX6-208ENST00000527619 JAKMIP2Q96AA8 810 aa8.3□□□□□ -1.08
SOX6-208ENST00000527619 DSCC1Q9BVC3 393 aa8.3□□□□□ -1.08
SOX6-208ENST00000527619 TRIM4Q9C037 500 aa8.3□□□□□ -1.08
SOX6-208ENST00000527619 HAUS4Q9H6D7 363 aa8.3□□□□□ -1.08
SOX6-208ENST00000527619 GJB4Q9NTQ9 266 aa8.3□□□□□ -1.08
SOX6-208ENST00000527619 BARX2Q9UMQ3 279 aaPredicted RBP8.3□□□□□ -1.08
SOX6-208ENST00000527619 SH3TC1Q8TE82 1336 aa8.3□□□□□ -1.08
SOX6-208ENST00000527619 SRRM3A6NNA2 597 aaPredicted RBP8.3□□□□□ -1.08
SOX6-208ENST00000527619 PPP1R37O75864 691 aa8.3□□□□□ -1.08
SOX6-208ENST00000527619 TGFB3P10600 412 aa8.3□□□□□ -1.08
SOX6-208ENST00000527619 MLLT3P42568 568 aaPredicted RBP8.3□□□□□ -1.08
SOX6-208ENST00000527619 EPHB4P54760 987 aa8.3□□□□□ -1.08
SOX6-208ENST00000527619 SPATA1Q5VX52 437 aa8.3□□□□□ -1.08
SOX6-208ENST00000527619 C6orf89Q6UWU4 347 aa8.3□□□□□ -1.08
SOX6-208ENST00000527619 ANKRD13BQ86YJ7 626 aa8.3□□□□□ -1.08
SOX6-208ENST00000527619 C1orf131Q8NDD1 294 aaKnown RBP8.3□□□□□ -1.08
SOX6-208ENST00000527619 MYCBPAPQ8TBZ2 947 aa8.3□□□□□ -1.08
SOX6-208ENST00000527619 RNPC3Q96LT9 517 aaKnown RBP8.3□□□□□ -1.08
SOX6-208ENST00000527619 CCT8L2Q96SF2 557 aa8.3□□□□□ -1.08
SOX6-208ENST00000527619 MAP3K14Q99558 947 aa8.3□□□□□ -1.08
SOX6-208ENST00000527619 EPAS1Q99814 870 aa8.3□□□□□ -1.08
SOX6-208ENST00000527619 GPCPD1Q9NPB8 672 aa8.3□□□□□ -1.08
SOX6-208ENST00000527619 MAP3K20Q9NYL2 800 aaKnown RBP8.3□□□□□ -1.08
SOX6-208ENST00000527619 UBAP1Q9NZ09 502 aa8.3□□□□□ -1.08
SOX6-208ENST00000527619 MAPK8IP1Q9UQF2 711 aa8.3□□□□□ -1.08
SOX6-208ENST00000527619 ZNF330Q9Y3S2 320 aaPredicted RBP8.3□□□□□ -1.08
SOX6-208ENST00000527619 LRRC10BA6NIK2 292 aa8.29□□□□□ -1.08
SOX6-208ENST00000527619 SKAP2O75563 359 aaPredicted RBP8.29□□□□□ -1.08
SOX6-208ENST00000527619 CHGBP05060 677 aa8.29□□□□□ -1.08
SOX6-208ENST00000527619 SSBP05455 408 aaKnown RBP eCLIP8.29□□□□□ -1.08
SOX6-208ENST00000527619 HDLBPQ00341 1268 aaKnown RBP8.29□□□□□ -1.08
SOX6-208ENST00000527619 C2orf54Q08AI8 447 aa8.29□□□□□ -1.08
SOX6-208ENST00000527619 NNTQ13423 1086 aa8.29□□□□□ -1.08
SOX6-208ENST00000527619 TRIM14Q14142 442 aa8.29□□□□□ -1.08
SOX6-208ENST00000527619 LRRC23Q53EV4 343 aaPredicted RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms