RNA–Protein interactions for RNA: ENST00000527339.1

LTBP3-208, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 3

Gene LTBP3, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-208ENST00000527339 IFIT3O14879 490 aaKnown RBP20.31■□□□□ 0.84
LTBP3-208ENST00000527339 ATP2A1O14983 1001 aa20.31■□□□□ 0.84
LTBP3-208ENST00000527339 EPB41L2O43491 1005 aaKnown RBP20.31■□□□□ 0.84
LTBP3-208ENST00000527339 CAPN2P17655 700 aa20.31■□□□□ 0.84
LTBP3-208ENST00000527339 ERCC3P19447 782 aa20.31■□□□□ 0.84
LTBP3-208ENST00000527339 BMP8BP34820 402 aa20.31■□□□□ 0.84
LTBP3-208ENST00000527339 OAZ1P54368 228 aa20.31■□□□□ 0.84
LTBP3-208ENST00000527339 ZNF543Q08ER8 600 aa20.31■□□□□ 0.84
LTBP3-208ENST00000527339 TSGA10IPQ3SY00 556 aa20.31■□□□□ 0.84
LTBP3-208ENST00000527339 MORN1Q5T089 497 aa20.31■□□□□ 0.84
LTBP3-208ENST00000527339 GPATCH4Q5T3I0 446 aaKnown RBP20.31■□□□□ 0.84
LTBP3-208ENST00000527339 BTNL9Q6UXG8 535 aa20.31■□□□□ 0.84
LTBP3-208ENST00000527339 Q7L0L9 218 aa20.31■□□□□ 0.84
LTBP3-208ENST00000527339 MTA3Q9BTC8 594 aa20.31■□□□□ 0.84
LTBP3-208ENST00000527339 TEX13BQ9BXU2 312 aa20.31■□□□□ 0.84
LTBP3-208ENST00000527339 FRMPD2Q68DX3 1309 aaPredicted RBP20.3■□□□□ 0.84
LTBP3-208ENST00000527339 SLC15A5A6NIM6 579 aa20.3■□□□□ 0.84
LTBP3-208ENST00000527339 DLL1O00548 723 aa20.3■□□□□ 0.84
LTBP3-208ENST00000527339 STRNO43815 780 aa20.3■□□□□ 0.84
LTBP3-208ENST00000527339 ZKSCAN1P17029 563 aaPredicted RBP20.3■□□□□ 0.84
LTBP3-208ENST00000527339 PTPREP23469 700 aa20.3■□□□□ 0.84
LTBP3-208ENST00000527339 MCM5P33992 734 aa20.3■□□□□ 0.84
LTBP3-208ENST00000527339 MAGEA10P43363 369 aaPredicted RBP20.3■□□□□ 0.84
LTBP3-208ENST00000527339 ANTXR2P58335 489 aa20.3■□□□□ 0.84
LTBP3-208ENST00000527339 CCL14Q16627 93 aa20.3■□□□□ 0.84
LTBP3-208ENST00000527339 NCAPG2Q86XI2 1143 aa20.3■□□□□ 0.84
LTBP3-208ENST00000527339 USP6NLQ92738 828 aa20.3■□□□□ 0.84
LTBP3-208ENST00000527339 PRR12Q9ULL5 1215 aa20.3■□□□□ 0.84
LTBP3-208ENST00000527339 EYSQ5T1H1 3165 aa20.3■□□□□ 0.84
LTBP3-208ENST00000527339 VCANP13611 3396 aa20.29■□□□□ 0.84
LTBP3-208ENST00000527339 XRCC5P13010 732 aaKnown RBP20.29■□□□□ 0.84
LTBP3-208ENST00000527339 PRKAR2AP13861 404 aaKnown RBP20.29■□□□□ 0.84
LTBP3-208ENST00000527339 RGS2P41220 211 aa20.29■□□□□ 0.84
LTBP3-208ENST00000527339 GRB14Q14449 540 aa20.29■□□□□ 0.84
LTBP3-208ENST00000527339 KRT32Q14532 448 aa20.29■□□□□ 0.84
LTBP3-208ENST00000527339 WTAPQ15007 396 aa20.29■□□□□ 0.84
LTBP3-208ENST00000527339 SNRNP48Q6IEG0 339 aaKnown RBP20.29■□□□□ 0.84
LTBP3-208ENST00000527339 CHST3Q7LGC8 479 aa20.29■□□□□ 0.84
LTBP3-208ENST00000527339 C11orf49Q9H6J7 331 aa20.29■□□□□ 0.84
LTBP3-208ENST00000527339 GPCPD1Q9NPB8 672 aa20.29■□□□□ 0.84
LTBP3-208ENST00000527339 MYH6P13533 1939 aa20.28■□□□□ 0.84
LTBP3-208ENST00000527339 PRC1O43663 620 aa20.28■□□□□ 0.84
LTBP3-208ENST00000527339 CACNB2Q08289 660 aaPredicted RBP20.28■□□□□ 0.84
LTBP3-208ENST00000527339 MAP2K5Q13163 448 aa20.28■□□□□ 0.84
LTBP3-208ENST00000527339 ASPRV1Q53RT3 343 aa20.28■□□□□ 0.84
LTBP3-208ENST00000527339 TMEM67Q5HYA8 995 aa20.28■□□□□ 0.84
LTBP3-208ENST00000527339 SYDE2Q5VT97 1194 aa20.28■□□□□ 0.84
LTBP3-208ENST00000527339 LHX8Q68G74 356 aa20.28■□□□□ 0.84
LTBP3-208ENST00000527339 TTBK2Q6IQ55 1244 aa20.28■□□□□ 0.84
LTBP3-208ENST00000527339 ABRAQ8N0Z2 381 aa20.28■□□□□ 0.84
LTBP3-208ENST00000527339 CPXCR1Q8N123 301 aa20.28■□□□□ 0.84
LTBP3-208ENST00000527339 IGDCC4Q8TDY8 1250 aa20.28■□□□□ 0.84
LTBP3-208ENST00000527339 APBA2Q99767 749 aa20.28■□□□□ 0.84
LTBP3-208ENST00000527339 RAVER2Q9HCJ3 691 aaKnown RBP20.28■□□□□ 0.84
LTBP3-208ENST00000527339 PLXNA1Q9UIW2 1896 aa20.28■□□□□ 0.84
LTBP3-208ENST00000527339 CCND3P30281 292 aaPredicted RBP20.27■□□□□ 0.84
LTBP3-208ENST00000527339 HSPA4P34932 840 aa20.27■□□□□ 0.84
LTBP3-208ENST00000527339 SLC16A2P36021 539 aa20.27■□□□□ 0.84
LTBP3-208ENST00000527339 TRMT44Q8IYL2 757 aaKnown RBP20.27■□□□□ 0.84
LTBP3-208ENST00000527339 RASEFQ8IZ41 740 aa20.27■□□□□ 0.84
LTBP3-208ENST00000527339 KCNB2Q92953 911 aa20.27■□□□□ 0.84
LTBP3-208ENST00000527339 TMEM87BQ96K49 555 aa20.27■□□□□ 0.84
LTBP3-208ENST00000527339 NEK1Q96PY6 1258 aa20.27■□□□□ 0.84
LTBP3-208ENST00000527339 SMCHD1A6NHR9 2005 aa20.26■□□□□ 0.83
LTBP3-208ENST00000527339 PARP1P09874 1014 aaKnown RBP20.26■□□□□ 0.83
LTBP3-208ENST00000527339 COL6A1P12109 1028 aa20.26■□□□□ 0.83
LTBP3-208ENST00000527339 FCER1AP12319 257 aa20.26■□□□□ 0.83
LTBP3-208ENST00000527339 ADORA2AP29274 412 aa20.26■□□□□ 0.83
LTBP3-208ENST00000527339 RANBP17Q9H2T7 1088 aaKnown RBP20.26■□□□□ 0.83
LTBP3-208ENST00000527339 ZNF536O15090 1300 aa20.26■□□□□ 0.83
LTBP3-208ENST00000527339 HOXC6P09630 235 aa20.25■□□□□ 0.83
LTBP3-208ENST00000527339 GOLGA8HP0CJ92 632 aa20.25■□□□□ 0.83
LTBP3-208ENST00000527339 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.25■□□□□ 0.83
LTBP3-208ENST00000527339 TMTC2Q8N394 836 aa20.25■□□□□ 0.83
LTBP3-208ENST00000527339 MMP19Q99542 508 aa20.25■□□□□ 0.83
LTBP3-208ENST00000527339 LY9Q9HBG7 655 aa20.25■□□□□ 0.83
LTBP3-208ENST00000527339 SENP2Q9HC62 589 aa20.25■□□□□ 0.83
LTBP3-208ENST00000527339 FBXO40Q9UH90 709 aa20.25■□□□□ 0.83
LTBP3-208ENST00000527339 RIPK3Q9Y572 518 aa20.25■□□□□ 0.83
LTBP3-208ENST00000527339 WDR19Q8NEZ3 1342 aa20.25■□□□□ 0.83
LTBP3-208ENST00000527339 SH2B2O14492 632 aaPredicted RBP20.24■□□□□ 0.83
LTBP3-208ENST00000527339 HMGB1P09429 215 aaKnown RBP20.24■□□□□ 0.83
LTBP3-208ENST00000527339 LIFRP42702 1097 aa20.24■□□□□ 0.83
LTBP3-208ENST00000527339 COL9A3Q14050 684 aaPredicted RBP20.24■□□□□ 0.83
LTBP3-208ENST00000527339 KCTD2Q14681 263 aa20.24■□□□□ 0.83
LTBP3-208ENST00000527339 LRRC26Q2I0M4 334 aa20.24■□□□□ 0.83
LTBP3-208ENST00000527339 TKFCQ3LXA3 575 aa20.24■□□□□ 0.83
LTBP3-208ENST00000527339 ADCK5Q3MIX3 580 aa20.24■□□□□ 0.83
LTBP3-208ENST00000527339 LRIT3Q3SXY7 679 aa20.24■□□□□ 0.83
LTBP3-208ENST00000527339 CCDC174Q6PII3 467 aa20.24■□□□□ 0.83
LTBP3-208ENST00000527339 CATIPQ7Z7H3 387 aa20.24■□□□□ 0.83
LTBP3-208ENST00000527339 DPP9Q86TI2 863 aa20.24■□□□□ 0.83
LTBP3-208ENST00000527339 DEFB123Q8N688 67 aa20.24■□□□□ 0.83
LTBP3-208ENST00000527339 CHST13Q8NET6 341 aa20.24■□□□□ 0.83
LTBP3-208ENST00000527339 SLC5A4Q9NY91 659 aa20.24■□□□□ 0.83
LTBP3-208ENST00000527339 ICAM1P05362 532 aa20.23■□□□□ 0.83
LTBP3-208ENST00000527339 SLC4A3P48751 1232 aa20.23■□□□□ 0.83
LTBP3-208ENST00000527339 SNAP25P60880 206 aa20.23■□□□□ 0.83
LTBP3-208ENST00000527339 TROAPQ12815 778 aa20.23■□□□□ 0.83
LTBP3-208ENST00000527339 DHX32Q7L7V1 743 aaKnown RBP20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms