RNA–Protein interactions for RNA: ENST00000527025.5

CCDC90B-208, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 777 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-208ENST00000527025 ENAHQ8N8S7 591 aaPredicted RBP10.45□□□□□ -0.74
CCDC90B-208ENST00000527025 SHCBP1Q8NEM2 672 aa10.45□□□□□ -0.74
CCDC90B-208ENST00000527025 RUFY2Q8WXA3 655 aa10.45□□□□□ -0.74
CCDC90B-208ENST00000527025 ANKS1AQ92625 1134 aa10.45□□□□□ -0.74
CCDC90B-208ENST00000527025 CPVLQ9H3G5 476 aa10.45□□□□□ -0.74
CCDC90B-208ENST00000527025 SLC38A10Q9HBR0 1119 aa10.45□□□□□ -0.74
CCDC90B-208ENST00000527025 RAVER2Q9HCJ3 691 aaKnown RBP10.45□□□□□ -0.74
CCDC90B-208ENST00000527025 CTNNA3Q9UI47 895 aa10.45□□□□□ -0.74
CCDC90B-208ENST00000527025 FEM1BQ9UK73 627 aa10.45□□□□□ -0.74
CCDC90B-208ENST00000527025 RBM8AQ9Y5S9 174 aaKnown RBP10.45□□□□□ -0.74
CCDC90B-208ENST00000527025 ZNF236Q9UL36 1845 aa10.44□□□□□ -0.74
CCDC90B-208ENST00000527025 FAM205CA6NFA0 338 aa10.44□□□□□ -0.74
CCDC90B-208ENST00000527025 E7EWF7 191 aa10.44□□□□□ -0.74
CCDC90B-208ENST00000527025 PGK2P07205 417 aa10.44□□□□□ -0.74
CCDC90B-208ENST00000527025 HOXC6P09630 235 aa10.44□□□□□ -0.74
CCDC90B-208ENST00000527025 GOLGA8HP0CJ92 632 aa10.44□□□□□ -0.74
CCDC90B-208ENST00000527025 SNHG28P0DPA3 235 aa10.44□□□□□ -0.74
CCDC90B-208ENST00000527025 PDHBP11177 359 aa10.44□□□□□ -0.74
CCDC90B-208ENST00000527025 ADORA2AP29274 412 aa10.44□□□□□ -0.74
CCDC90B-208ENST00000527025 SLC1A4P43007 532 aa10.44□□□□□ -0.74
CCDC90B-208ENST00000527025 ANTXR2P58335 489 aa10.44□□□□□ -0.74
CCDC90B-208ENST00000527025 CACNB2Q08289 660 aaPredicted RBP10.44□□□□□ -0.74
CCDC90B-208ENST00000527025 NECTIN1Q15223 517 aa10.44□□□□□ -0.74
CCDC90B-208ENST00000527025 CHST3Q7LGC8 479 aa10.44□□□□□ -0.74
CCDC90B-208ENST00000527025 CPXCR1Q8N123 301 aa10.44□□□□□ -0.74
CCDC90B-208ENST00000527025 TRPV1Q8NER1 839 aa10.44□□□□□ -0.74
CCDC90B-208ENST00000527025 ESR2Q92731 530 aa10.44□□□□□ -0.74
CCDC90B-208ENST00000527025 AGBL1Q96MI9 1066 aa10.44□□□□□ -0.74
CCDC90B-208ENST00000527025 TTC14Q96N46 770 aa10.44□□□□□ -0.74
CCDC90B-208ENST00000527025 ZSCAN10Q96SZ4 725 aaPredicted RBP10.44□□□□□ -0.74
CCDC90B-208ENST00000527025 RNF208Q9H0X6 261 aa10.44□□□□□ -0.74
CCDC90B-208ENST00000527025 RNF41Q9H4P4 317 aaPredicted RBP10.44□□□□□ -0.74
CCDC90B-208ENST00000527025 PAK6Q9NQU5 681 aaPredicted RBP10.44□□□□□ -0.74
CCDC90B-208ENST00000527025 GPHNQ9NQX3 736 aaPredicted RBP10.44□□□□□ -0.74
CCDC90B-208ENST00000527025 BIN2Q9UBW5 565 aaPredicted RBP10.44□□□□□ -0.74
CCDC90B-208ENST00000527025 PRR12Q9ULL5 1215 aa10.44□□□□□ -0.74
CCDC90B-208ENST00000527025 PLXNA1Q9UIW2 1896 aa10.44□□□□□ -0.74
CCDC90B-208ENST00000527025 TNKSO95271 1327 aa10.43□□□□□ -0.74
CCDC90B-208ENST00000527025 ATP2A1O14983 1001 aa10.43□□□□□ -0.74
CCDC90B-208ENST00000527025 PLA2G6O60733 806 aa10.43□□□□□ -0.74
CCDC90B-208ENST00000527025 GJB1P08034 283 aa10.43□□□□□ -0.74
CCDC90B-208ENST00000527025 CCND3P30281 292 aaPredicted RBP10.43□□□□□ -0.74
CCDC90B-208ENST00000527025 RGS2P41220 211 aa10.43□□□□□ -0.74
CCDC90B-208ENST00000527025 SLC4A3P48751 1232 aa10.43□□□□□ -0.74
CCDC90B-208ENST00000527025 MLLT1Q03111 559 aaPredicted RBP10.43□□□□□ -0.74
CCDC90B-208ENST00000527025 SLC35G1Q2M3R5 365 aa10.43□□□□□ -0.74
CCDC90B-208ENST00000527025 SNRNP48Q6IEG0 339 aaKnown RBP10.43□□□□□ -0.74
CCDC90B-208ENST00000527025 BTNL9Q6UXG8 535 aa10.43□□□□□ -0.74
CCDC90B-208ENST00000527025 DGKHQ86XP1 1220 aa10.43□□□□□ -0.74
CCDC90B-208ENST00000527025 CCAR1Q8IX12 1150 aaKnown RBP10.43□□□□□ -0.74
CCDC90B-208ENST00000527025 SOCS4Q8WXH5 440 aa10.43□□□□□ -0.74
CCDC90B-208ENST00000527025 DEFB118Q96PH6 123 aa10.43□□□□□ -0.74
CCDC90B-208ENST00000527025 MROH8Q9H579 483 aa10.43□□□□□ -0.74
CCDC90B-208ENST00000527025 GPCPD1Q9NPB8 672 aa10.43□□□□□ -0.74
CCDC90B-208ENST00000527025 SLC27A2O14975 620 aa10.42□□□□□ -0.74
CCDC90B-208ENST00000527025 STRNO43815 780 aa10.42□□□□□ -0.74
CCDC90B-208ENST00000527025 SGPL1O95470 568 aa10.42□□□□□ -0.74
CCDC90B-208ENST00000527025 HMGCRP04035 888 aa10.42□□□□□ -0.74
CCDC90B-208ENST00000527025 CYP2C19P33261 490 aa10.42□□□□□ -0.74
CCDC90B-208ENST00000527025 GJA8P48165 433 aa10.42□□□□□ -0.74
CCDC90B-208ENST00000527025 STAT2P52630 851 aa10.42□□□□□ -0.74
CCDC90B-208ENST00000527025 ZNF543Q08ER8 600 aa10.42□□□□□ -0.74
CCDC90B-208ENST00000527025 ZNF792Q3KQV3 632 aa10.42□□□□□ -0.74
CCDC90B-208ENST00000527025 PRAMEF19Q5SWL8 479 aa10.42□□□□□ -0.74
CCDC90B-208ENST00000527025 UBE2Q1Q7Z7E8 422 aa10.42□□□□□ -0.74
CCDC90B-208ENST00000527025 MB21D2Q8IYB1 491 aaPredicted RBP10.42□□□□□ -0.74
CCDC90B-208ENST00000527025 U2AF1L4Q8WU68 220 aaKnown RBP10.42□□□□□ -0.74
CCDC90B-208ENST00000527025 DCAF4Q8WV16 495 aa10.42□□□□□ -0.74
CCDC90B-208ENST00000527025 FGD4Q96M96 766 aa10.42□□□□□ -0.74
CCDC90B-208ENST00000527025 APBA2Q99767 749 aa10.42□□□□□ -0.74
CCDC90B-208ENST00000527025 TEX13BQ9BXU2 312 aa10.42□□□□□ -0.74
CCDC90B-208ENST00000527025 KRT23Q9C075 422 aa10.42□□□□□ -0.74
CCDC90B-208ENST00000527025 UBA5Q9GZZ9 404 aa10.42□□□□□ -0.74
CCDC90B-208ENST00000527025 CRISPLD2Q9H0B8 497 aa10.42□□□□□ -0.74
CCDC90B-208ENST00000527025 DDX49Q9Y6V7 483 aaKnown RBP10.42□□□□□ -0.74
CCDC90B-208ENST00000527025 DNAH12Q6ZR08 3092 aa10.42□□□□□ -0.74
CCDC90B-208ENST00000527025 LCTP09848 1927 aa10.42□□□□□ -0.74
CCDC90B-208ENST00000527025 DNAJC25-GNG10A0A024R161 153 aa10.41□□□□□ -0.74
CCDC90B-208ENST00000527025 ZBED4O75132 1171 aa10.41□□□□□ -0.74
CCDC90B-208ENST00000527025 CDC45O75419 566 aa10.41□□□□□ -0.74
CCDC90B-208ENST00000527025 SLC25A27O95847 323 aa10.41□□□□□ -0.74
CCDC90B-208ENST00000527025 UBXN2AP68543 259 aa10.41□□□□□ -0.74
CCDC90B-208ENST00000527025 CCDC96Q2M329 555 aa10.41□□□□□ -0.74
CCDC90B-208ENST00000527025 MUM1L1Q5H9M0 696 aa10.41□□□□□ -0.74
CCDC90B-208ENST00000527025 CREB3L3Q68CJ9 461 aa10.41□□□□□ -0.74
CCDC90B-208ENST00000527025 CCDC174Q6PII3 467 aa10.41□□□□□ -0.74
CCDC90B-208ENST00000527025 ABRAQ8N0Z2 381 aa10.41□□□□□ -0.74
CCDC90B-208ENST00000527025 STAG2Q8N3U4 1231 aa10.41□□□□□ -0.74
CCDC90B-208ENST00000527025 PNMA1Q8ND90 353 aa10.41□□□□□ -0.74
CCDC90B-208ENST00000527025 IGDCC4Q8TDY8 1250 aa10.41□□□□□ -0.74
CCDC90B-208ENST00000527025 CHURC1Q8WUH1 139 aa10.41□□□□□ -0.74
CCDC90B-208ENST00000527025 MAML3Q96JK9 1138 aa10.41□□□□□ -0.74
CCDC90B-208ENST00000527025 PURBQ96QR8 312 aaKnown RBP10.41□□□□□ -0.74
CCDC90B-208ENST00000527025 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.41□□□□□ -0.74
CCDC90B-208ENST00000527025 RANBP17Q9H2T7 1088 aaKnown RBP10.41□□□□□ -0.74
CCDC90B-208ENST00000527025 CNNM2Q9H8M5 875 aa10.41□□□□□ -0.74
CCDC90B-208ENST00000527025 ANO2Q9NQ90 1003 aa10.41□□□□□ -0.74
CCDC90B-208ENST00000527025 IVNS1ABPQ9Y6Y0 642 aa10.41□□□□□ -0.74
CCDC90B-208ENST00000527025 FRMPD3Q5JV73 1810 aa10.4□□□□□ -0.74
CCDC90B-208ENST00000527025 ASTN1O14525 1302 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms