RNA–Protein interactions for RNA: ENST00000525633.1

ATPAF1-207, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 4

Gene ATPAF1, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-207ENST00000525633 JMJD4Q9H9V9 463 aa7.36□□□□□ -1.23
ATPAF1-207ENST00000525633 FBXO28Q9NVF7 368 aa7.36□□□□□ -1.23
ATPAF1-207ENST00000525633 FEM1BQ9UK73 627 aa7.36□□□□□ -1.23
ATPAF1-207ENST00000525633 PRR12Q9ULL5 1215 aa7.36□□□□□ -1.23
ATPAF1-207ENST00000525633 KCNH4Q9UQ05 1017 aa7.36□□□□□ -1.23
ATPAF1-207ENST00000525633 KIF3AQ9Y496 699 aa7.36□□□□□ -1.23
ATPAF1-207ENST00000525633 TRIM17Q9Y577 477 aa7.36□□□□□ -1.23
ATPAF1-207ENST00000525633 DOCK3Q8IZD9 2030 aa7.35□□□□□ -1.23
ATPAF1-207ENST00000525633 USP17L15C9J2P7 530 aa7.35□□□□□ -1.23
ATPAF1-207ENST00000525633 USP17L13C9JLJ4 530 aa7.35□□□□□ -1.23
ATPAF1-207ENST00000525633 USP17L11C9JVI0 530 aa7.35□□□□□ -1.23
ATPAF1-207ENST00000525633 USP17L18D6R9N7 530 aa7.35□□□□□ -1.23
ATPAF1-207ENST00000525633 USP17L22D6RA61 530 aa7.35□□□□□ -1.23
ATPAF1-207ENST00000525633 USP17L17D6RBQ6 530 aa7.35□□□□□ -1.23
ATPAF1-207ENST00000525633 USP17L19D6RCP7 530 aa7.35□□□□□ -1.23
ATPAF1-207ENST00000525633 USP17L20D6RJB6 530 aa7.35□□□□□ -1.23
ATPAF1-207ENST00000525633 H3BQV1 296 aa7.35□□□□□ -1.23
ATPAF1-207ENST00000525633 FLOT1O75955 427 aa7.35□□□□□ -1.23
ATPAF1-207ENST00000525633 CETPP11597 493 aa7.35□□□□□ -1.23
ATPAF1-207ENST00000525633 SCG2P13521 617 aa7.35□□□□□ -1.23
ATPAF1-207ENST00000525633 PDCP20941 246 aa7.35□□□□□ -1.23
ATPAF1-207ENST00000525633 STAT2P52630 851 aa7.35□□□□□ -1.23
ATPAF1-207ENST00000525633 GTF2A2P52657 109 aa7.35□□□□□ -1.23
ATPAF1-207ENST00000525633 GUCY1B3Q02153 619 aa7.35□□□□□ -1.23
ATPAF1-207ENST00000525633 SP3Q02447 781 aa7.35□□□□□ -1.23
ATPAF1-207ENST00000525633 USP17L24Q0WX57 530 aa7.35□□□□□ -1.23
ATPAF1-207ENST00000525633 PKN1Q16512 942 aa7.35□□□□□ -1.23
ATPAF1-207ENST00000525633 SH3D19Q5HYK7 790 aa7.35□□□□□ -1.23
ATPAF1-207ENST00000525633 TREML2Q5T2D2 321 aa7.35□□□□□ -1.23
ATPAF1-207ENST00000525633 FOXD4L5Q5VV16 416 aaPredicted RBP7.35□□□□□ -1.23
ATPAF1-207ENST00000525633 CCDC174Q6PII3 467 aa7.35□□□□□ -1.23
ATPAF1-207ENST00000525633 BTNL9Q6UXG8 535 aa7.35□□□□□ -1.23
ATPAF1-207ENST00000525633 FASTKD5Q7L8L6 764 aaKnown RBP7.35□□□□□ -1.23
ATPAF1-207ENST00000525633 FAM160B2Q86V87 743 aa7.35□□□□□ -1.23
ATPAF1-207ENST00000525633 FOXD4L4Q8WXT5 416 aaPredicted RBP7.35□□□□□ -1.23
ATPAF1-207ENST00000525633 BRI3BPQ8WY22 251 aa7.35□□□□□ -1.23
ATPAF1-207ENST00000525633 GPKOWQ92917 476 aaPredicted RBP eCLIP7.35□□□□□ -1.23
ATPAF1-207ENST00000525633 ERO1AQ96HE7 468 aa7.35□□□□□ -1.23
ATPAF1-207ENST00000525633 C8orf76Q96K31 380 aa7.35□□□□□ -1.23
ATPAF1-207ENST00000525633 SLF1Q9BQI6 1058 aa7.35□□□□□ -1.23
ATPAF1-207ENST00000525633 RNF26Q9BY78 433 aaPredicted RBP7.35□□□□□ -1.23
ATPAF1-207ENST00000525633 RIOX1Q9H6W3 641 aa7.35□□□□□ -1.23
ATPAF1-207ENST00000525633 SEC63Q9UGP8 760 aaKnown RBP7.35□□□□□ -1.23
ATPAF1-207ENST00000525633 PTPN22Q9Y2R2 807 aa7.35□□□□□ -1.23
ATPAF1-207ENST00000525633 CTDP1Q9Y5B0 961 aaPredicted RBP7.35□□□□□ -1.23
ATPAF1-207ENST00000525633 CCL15-CCL14A0A0B4J2E2 113 aa7.34□□□□□ -1.23
ATPAF1-207ENST00000525633 PNMA6FA0A0J9YX94 578 aa7.34□□□□□ -1.23
ATPAF1-207ENST00000525633 VPS37CA5D8V6 355 aaPredicted RBP7.34□□□□□ -1.23
ATPAF1-207ENST00000525633 ZBTB5O15062 677 aa7.34□□□□□ -1.23
ATPAF1-207ENST00000525633 STX6O43752 255 aa7.34□□□□□ -1.23
ATPAF1-207ENST00000525633 PLA2G6O60733 806 aa7.34□□□□□ -1.23
ATPAF1-207ENST00000525633 ZBED4O75132 1171 aa7.34□□□□□ -1.23
ATPAF1-207ENST00000525633 SYT1P21579 422 aa7.34□□□□□ -1.23
ATPAF1-207ENST00000525633 OSBPP22059 807 aa7.34□□□□□ -1.23
ATPAF1-207ENST00000525633 CAP1Q01518 475 aa7.34□□□□□ -1.23
ATPAF1-207ENST00000525633 MOGSQ13724 837 aa7.34□□□□□ -1.23
ATPAF1-207ENST00000525633 TRIM29Q14134 588 aa7.34□□□□□ -1.23
ATPAF1-207ENST00000525633 COG2Q14746 738 aa7.34□□□□□ -1.23
ATPAF1-207ENST00000525633 CDC37Q16543 378 aaPredicted RBP7.34□□□□□ -1.23
ATPAF1-207ENST00000525633 CCL15Q16663 113 aa7.34□□□□□ -1.23
ATPAF1-207ENST00000525633 PFKFB3Q16875 520 aaPredicted RBP7.34□□□□□ -1.23
ATPAF1-207ENST00000525633 QRICH1Q2TAL8 776 aa7.34□□□□□ -1.23
ATPAF1-207ENST00000525633 PRPF38BQ5VTL8 546 aaKnown RBP7.34□□□□□ -1.23
ATPAF1-207ENST00000525633 GPAT2Q6NUI2 795 aa7.34□□□□□ -1.23
ATPAF1-207ENST00000525633 CATSPERGQ6ZRH7 1159 aa7.34□□□□□ -1.23
ATPAF1-207ENST00000525633 HEATR3Q7Z4Q2 680 aa7.34□□□□□ -1.23
ATPAF1-207ENST00000525633 PRPF38AQ8NAV1 312 aaKnown RBP7.34□□□□□ -1.23
ATPAF1-207ENST00000525633 PROCA1Q8NCQ7 364 aaPredicted RBP7.34□□□□□ -1.23
ATPAF1-207ENST00000525633 CD99L2Q8TCZ2 262 aa7.34□□□□□ -1.23
ATPAF1-207ENST00000525633 COA7Q96BR5 231 aa7.34□□□□□ -1.23
ATPAF1-207ENST00000525633 EFCC1Q9HA90 598 aa7.34□□□□□ -1.23
ATPAF1-207ENST00000525633 GJB4Q9NTQ9 266 aa7.34□□□□□ -1.23
ATPAF1-207ENST00000525633 CHMP5Q9NZZ3 219 aa7.34□□□□□ -1.23
ATPAF1-207ENST00000525633 VPS54Q9P1Q0 977 aa7.34□□□□□ -1.23
ATPAF1-207ENST00000525633 RBM27Q9P2N5 1060 aaKnown RBP7.34□□□□□ -1.23
ATPAF1-207ENST00000525633 PPP1R9AQ9ULJ8 1098 aa7.34□□□□□ -1.23
ATPAF1-207ENST00000525633 MGAMO43451 1857 aa7.34□□□□□ -1.23
ATPAF1-207ENST00000525633 PLXNA1Q9UIW2 1896 aa7.34□□□□□ -1.23
ATPAF1-207ENST00000525633 CASP8AP2Q9UKL3 1982 aa7.33□□□□□ -1.24
ATPAF1-207ENST00000525633 A0A0G2JMZ2 1700 aa7.33□□□□□ -1.24
ATPAF1-207ENST00000525633 KIAA1217Q5T5P2 1943 aa7.33□□□□□ -1.24
ATPAF1-207ENST00000525633 STXBP3O00186 592 aa7.33□□□□□ -1.24
ATPAF1-207ENST00000525633 PPP1R11O60927 126 aaPredicted RBP7.33□□□□□ -1.24
ATPAF1-207ENST00000525633 TAL1P17542 331 aaPredicted RBP7.33□□□□□ -1.24
ATPAF1-207ENST00000525633 DSG3P32926 999 aa7.33□□□□□ -1.24
ATPAF1-207ENST00000525633 DDIT3P35638 169 aa7.33□□□□□ -1.24
ATPAF1-207ENST00000525633 NAPAP54920 295 aa7.33□□□□□ -1.24
ATPAF1-207ENST00000525633 NLRP5P59047 1200 aa7.33□□□□□ -1.24
ATPAF1-207ENST00000525633 IRX3P78415 501 aaPredicted RBP7.33□□□□□ -1.24
ATPAF1-207ENST00000525633 NUCB2P80303 420 aa7.33□□□□□ -1.24
ATPAF1-207ENST00000525633 PABPC4Q13310 644 aaKnown RBP eCLIP7.33□□□□□ -1.24
ATPAF1-207ENST00000525633 PKP1Q13835 747 aa7.33□□□□□ -1.24
ATPAF1-207ENST00000525633 USH1GQ495M9 461 aa7.33□□□□□ -1.24
ATPAF1-207ENST00000525633 KRT40Q6A162 431 aa7.33□□□□□ -1.24
ATPAF1-207ENST00000525633 WWC2Q6AWC2 1192 aa7.33□□□□□ -1.24
ATPAF1-207ENST00000525633 MCTP1Q6DN14 999 aa7.33□□□□□ -1.24
ATPAF1-207ENST00000525633 FBXO11Q86XK2 927 aa7.33□□□□□ -1.24
ATPAF1-207ENST00000525633 FAM43AQ8N2R8 423 aa7.33□□□□□ -1.24
ATPAF1-207ENST00000525633 ARMC5Q96C12 935 aa7.33□□□□□ -1.24
ATPAF1-207ENST00000525633 ATG4CQ96DT6 458 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms