RNA–Protein interactions for RNA: ENST00000525469.1

CD44-218, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 705 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-218ENST00000525469 OCLNQ16625 522 aa6.05□□□□□ -1.44
CD44-218ENST00000525469 NBPF9Q3BBW0 867 aa6.05□□□□□ -1.44
CD44-218ENST00000525469 LDLRAD1Q5T700 205 aa6.05□□□□□ -1.44
CD44-218ENST00000525469 TMEM164Q5U3C3 297 aa6.05□□□□□ -1.44
CD44-218ENST00000525469 TTLL7Q6ZT98 887 aa6.05□□□□□ -1.44
CD44-218ENST00000525469 APOBEC3FQ8IUX4 373 aaKnown RBP6.05□□□□□ -1.44
CD44-218ENST00000525469 ZNF417Q8TAU3 575 aa6.05□□□□□ -1.44
CD44-218ENST00000525469 ZNF428Q96B54 188 aa6.05□□□□□ -1.44
CD44-218ENST00000525469 ZNF587Q96SQ5 575 aaPredicted RBP6.05□□□□□ -1.44
CD44-218ENST00000525469 MDFIQ99750 246 aa6.05□□□□□ -1.44
CD44-218ENST00000525469 GSX2Q9BZM3 304 aa6.05□□□□□ -1.44
CD44-218ENST00000525469 RNF208Q9H0X6 261 aa6.05□□□□□ -1.44
CD44-218ENST00000525469 IGFLR1Q9H665 355 aa6.05□□□□□ -1.44
CD44-218ENST00000525469 PANK3Q9H999 370 aa6.05□□□□□ -1.44
CD44-218ENST00000525469 GRPEL1Q9HAV7 217 aa6.05□□□□□ -1.44
CD44-218ENST00000525469 POLLQ9UGP5 575 aa6.05□□□□□ -1.44
CD44-218ENST00000525469 KNSTRNQ9Y448 316 aa6.05□□□□□ -1.44
CD44-218ENST00000525469 DUOX1Q9NRD9 1551 aa6.05□□□□□ -1.44
CD44-218ENST00000525469 CEMIPQ8WUJ3 1361 aa6.05□□□□□ -1.44
CD44-218ENST00000525469 MAPK8IP3Q9UPT6 1336 aa6.04□□□□□ -1.44
CD44-218ENST00000525469 ALPK3Q96L96 1907 aa6.04□□□□□ -1.44
CD44-218ENST00000525469 UNCXA6NJT0 531 aa6.04□□□□□ -1.44
CD44-218ENST00000525469 ZNF500O60304 480 aaPredicted RBP6.04□□□□□ -1.44
CD44-218ENST00000525469 UFL1O94874 794 aa6.04□□□□□ -1.44
CD44-218ENST00000525469 GJB1P08034 283 aa6.04□□□□□ -1.44
CD44-218ENST00000525469 RARAP10276 462 aa6.04□□□□□ -1.44
CD44-218ENST00000525469 HOXD10P28358 340 aa6.04□□□□□ -1.44
CD44-218ENST00000525469 BMP8BP34820 402 aa6.04□□□□□ -1.44
CD44-218ENST00000525469 IREB2P48200 963 aaKnown RBP6.04□□□□□ -1.44
CD44-218ENST00000525469 UBXN2AP68543 259 aa6.04□□□□□ -1.44
CD44-218ENST00000525469 GPSM2P81274 684 aa6.04□□□□□ -1.44
CD44-218ENST00000525469 LRIT3Q3SXY7 679 aa6.04□□□□□ -1.44
CD44-218ENST00000525469 SASS6Q6UVJ0 657 aa6.04□□□□□ -1.44
CD44-218ENST00000525469 TREML1Q86YW5 311 aa6.04□□□□□ -1.44
CD44-218ENST00000525469 TBC1D16Q8TBP0 767 aa6.04□□□□□ -1.44
CD44-218ENST00000525469 RAET1EQ8TD07 263 aa6.04□□□□□ -1.44
CD44-218ENST00000525469 SHISA4Q96DD7 197 aa6.04□□□□□ -1.44
CD44-218ENST00000525469 NACC1Q96RE7 527 aa6.04□□□□□ -1.44
CD44-218ENST00000525469 PLVAPQ9BX97 442 aa6.04□□□□□ -1.44
CD44-218ENST00000525469 TRMT112Q9UI30 125 aaKnown RBP6.04□□□□□ -1.44
CD44-218ENST00000525469 SLC6A14Q9UN76 642 aa6.04□□□□□ -1.44
CD44-218ENST00000525469 KIF3AQ9Y496 699 aa6.04□□□□□ -1.44
CD44-218ENST00000525469 SH3TC1Q8TE82 1336 aa6.03□□□□□ -1.44
CD44-218ENST00000525469 IRS2Q9Y4H2 1338 aa6.03□□□□□ -1.44
CD44-218ENST00000525469 TMEM265A0A087WTH1 108 aa6.03□□□□□ -1.44
CD44-218ENST00000525469 GOLGA6L22H0YM25 854 aa6.03□□□□□ -1.44
CD44-218ENST00000525469 WNT10BO00744 389 aa6.03□□□□□ -1.44
CD44-218ENST00000525469 TFRCP02786 760 aaKnown RBP6.03□□□□□ -1.44
CD44-218ENST00000525469 CCL5P13501 91 aa6.03□□□□□ -1.44
CD44-218ENST00000525469 ATP2B4P23634 1241 aa6.03□□□□□ -1.44
CD44-218ENST00000525469 GRK4P32298 578 aa6.03□□□□□ -1.44
CD44-218ENST00000525469 MMP14P50281 582 aa6.03□□□□□ -1.44
CD44-218ENST00000525469 GABPB1Q06547 395 aaPredicted RBP6.03□□□□□ -1.44
CD44-218ENST00000525469 SUPT20HL1Q3ZLR7 823 aa6.03□□□□□ -1.44
CD44-218ENST00000525469 HSP90AB3PQ58FF7 597 aa6.03□□□□□ -1.44
CD44-218ENST00000525469 COX20Q5RI15 118 aa6.03□□□□□ -1.44
CD44-218ENST00000525469 TDHQ8IZJ6 230 aa6.03□□□□□ -1.44
CD44-218ENST00000525469 CLMNQ96JQ2 1002 aa6.03□□□□□ -1.44
CD44-218ENST00000525469 GBP4Q96PP9 640 aa6.03□□□□□ -1.44
CD44-218ENST00000525469 PPP1R9BQ96SB3 815 aa6.03□□□□□ -1.44
CD44-218ENST00000525469 FEZ1Q99689 392 aa6.03□□□□□ -1.44
CD44-218ENST00000525469 MKNK1Q9BUB5 465 aa6.03□□□□□ -1.44
CD44-218ENST00000525469 CHMP4BQ9H444 224 aaKnown RBP6.03□□□□□ -1.44
CD44-218ENST00000525469 DNAJB12Q9NXW2 375 aaKnown RBP6.03□□□□□ -1.44
CD44-218ENST00000525469 ZSWIM8A7E2V4 1837 aa6.03□□□□□ -1.44
CD44-218ENST00000525469 ECM29Q5VYK3 1845 aa6.03□□□□□ -1.44
CD44-218ENST00000525469 XYLBO75191 536 aa6.02□□□□□ -1.45
CD44-218ENST00000525469 ALBP02768 609 aa6.02□□□□□ -1.45
CD44-218ENST00000525469 CAPN2P17655 700 aa6.02□□□□□ -1.45
CD44-218ENST00000525469 COL8A1P27658 744 aa6.02□□□□□ -1.45
CD44-218ENST00000525469 CALRP27797 417 aaKnown RBP6.02□□□□□ -1.45
CD44-218ENST00000525469 RAC1P63000 192 aa6.02□□□□□ -1.45
CD44-218ENST00000525469 LACTBP83111 547 aaPredicted RBP6.02□□□□□ -1.45
CD44-218ENST00000525469 CAP1Q01518 475 aa6.02□□□□□ -1.45
CD44-218ENST00000525469 TRIM28Q13263 835 aaKnown RBP6.02□□□□□ -1.45
CD44-218ENST00000525469 TAF7Q15545 349 aaPredicted RBP6.02□□□□□ -1.45
CD44-218ENST00000525469 MAP3K11Q16584 847 aa6.02□□□□□ -1.45
CD44-218ENST00000525469 MCM10Q7L590 875 aa6.02□□□□□ -1.45
CD44-218ENST00000525469 UBE2Q1Q7Z7E8 422 aa6.02□□□□□ -1.45
CD44-218ENST00000525469 ANKRD13AQ8IZ07 590 aa6.02□□□□□ -1.45
CD44-218ENST00000525469 C7orf61Q8IZ16 206 aa6.02□□□□□ -1.45
CD44-218ENST00000525469 RGL4Q8IZJ4 473 aa6.02□□□□□ -1.45
CD44-218ENST00000525469 MICALL1Q8N3F8 863 aa6.02□□□□□ -1.45
CD44-218ENST00000525469 RETREG2Q8NC44 543 aa6.02□□□□□ -1.45
CD44-218ENST00000525469 PIK3R5Q8WYR1 880 aa6.02□□□□□ -1.45
CD44-218ENST00000525469 GMLQ99445 158 aa6.02□□□□□ -1.45
CD44-218ENST00000525469 PTPN18Q99952 460 aa6.02□□□□□ -1.45
CD44-218ENST00000525469 SPOCK3Q9BQ16 436 aa6.02□□□□□ -1.45
CD44-218ENST00000525469 RBSNQ9H1K0 784 aa6.02□□□□□ -1.45
CD44-218ENST00000525469 SUV39H2Q9H5I1 410 aa6.02□□□□□ -1.45
CD44-218ENST00000525469 JPH1Q9HDC5 661 aaPredicted RBP6.02□□□□□ -1.45
CD44-218ENST00000525469 GEMIN8Q9NWZ8 242 aaKnown RBP6.02□□□□□ -1.45
CD44-218ENST00000525469 CALCOCO1Q9P1Z2 691 aa6.02□□□□□ -1.45
CD44-218ENST00000525469 RAPGEFL1Q9UHV5 662 aa6.02□□□□□ -1.45
CD44-218ENST00000525469 LRFN2Q9ULH4 789 aa6.02□□□□□ -1.45
CD44-218ENST00000525469 FZD1Q9UP38 647 aa6.02□□□□□ -1.45
CD44-218ENST00000525469 FNDC3AQ9Y2H6 1198 aaKnown RBP6.02□□□□□ -1.45
CD44-218ENST00000525469 MGAMO43451 1857 aa6.02□□□□□ -1.45
CD44-218ENST00000525469 MYO3BQ8WXR4 1341 aa6.01□□□□□ -1.45
CD44-218ENST00000525469 CCL15-CCL14A0A0B4J2E2 113 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms