RNA–Protein interactions for RNA: ENST00000525428.5

CLNS1A-204, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLNS1A, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-204ENST00000525428 IQCEQ6IPM2 695 aa12.54□□□□□ -0.4
CLNS1A-204ENST00000525428 KDM7AQ6ZMT4 941 aa12.54□□□□□ -0.4
CLNS1A-204ENST00000525428 FNBP4Q8N3X1 1017 aaPredicted RBP12.54□□□□□ -0.4
CLNS1A-204ENST00000525428 SPATA4Q8NEY3 305 aa12.54□□□□□ -0.4
CLNS1A-204ENST00000525428 HAUS7Q99871 368 aa12.54□□□□□ -0.4
CLNS1A-204ENST00000525428 KCNJ14Q9UNX9 436 aa12.54□□□□□ -0.4
CLNS1A-204ENST00000525428 EPB41P11171 864 aaKnown RBP12.53□□□□□ -0.4
CLNS1A-204ENST00000525428 TIMM10P62072 90 aa12.53□□□□□ -0.4
CLNS1A-204ENST00000525428 ANKRD20A8PQ5CZ79 823 aa12.53□□□□□ -0.4
CLNS1A-204ENST00000525428 CAPRIN2Q6IMN6 1127 aaKnown RBP12.53□□□□□ -0.4
CLNS1A-204ENST00000525428 TTLL7Q6ZT98 887 aa12.53□□□□□ -0.4
CLNS1A-204ENST00000525428 CCDC50Q8IVM0 306 aa12.53□□□□□ -0.4
CLNS1A-204ENST00000525428 NOD2Q9HC29 1040 aa12.53□□□□□ -0.4
CLNS1A-204ENST00000525428 PAG1Q9NWQ8 432 aa12.53□□□□□ -0.4
CLNS1A-204ENST00000525428 HEG1Q9ULI3 1381 aa12.53□□□□□ -0.4
CLNS1A-204ENST00000525428 MAST3O60307 1309 aa12.53□□□□□ -0.4
CLNS1A-204ENST00000525428 A6NNZ2 444 aa12.53□□□□□ -0.4
CLNS1A-204ENST00000525428 M0R2C6 588 aa12.53□□□□□ -0.4
CLNS1A-204ENST00000525428 CARSP49589 748 aaKnown RBP12.53□□□□□ -0.4
CLNS1A-204ENST00000525428 METAP2P50579 478 aaKnown RBP eCLIP12.53□□□□□ -0.4
CLNS1A-204ENST00000525428 PSMD2Q13200 908 aa12.53□□□□□ -0.4
CLNS1A-204ENST00000525428 TUBB8Q3ZCM7 444 aa12.53□□□□□ -0.4
CLNS1A-204ENST00000525428 CDKAL1Q5VV42 579 aa12.53□□□□□ -0.4
CLNS1A-204ENST00000525428 RIC3Q7Z5B4 369 aa12.53□□□□□ -0.4
CLNS1A-204ENST00000525428 EPSTI1Q96J88 318 aa12.53□□□□□ -0.4
CLNS1A-204ENST00000525428 DDX21Q9NR30 783 aaKnown RBP eCLIP12.53□□□□□ -0.4
CLNS1A-204ENST00000525428 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.53□□□□□ -0.4
CLNS1A-204ENST00000525428 SLIT2O94813 1529 aa12.53□□□□□ -0.4
CLNS1A-204ENST00000525428 COL14A1Q05707 1796 aaKnown RBP12.53□□□□□ -0.4
CLNS1A-204ENST00000525428 DISP2A7MBM2 1401 aa12.52□□□□□ -0.4
CLNS1A-204ENST00000525428 FAM237AA0A1B0GTK4 181 aa12.52□□□□□ -0.4
CLNS1A-204ENST00000525428 IPO7O95373 1038 aaKnown RBP12.52□□□□□ -0.4
CLNS1A-204ENST00000525428 NT5DC1Q5TFE4 455 aa12.52□□□□□ -0.4
CLNS1A-204ENST00000525428 NFRKBQ6P4R8 1299 aa12.52□□□□□ -0.4
CLNS1A-204ENST00000525428 C6orf89Q6UWU4 347 aa12.52□□□□□ -0.4
CLNS1A-204ENST00000525428 CSRNP2Q9H175 543 aa12.52□□□□□ -0.4
CLNS1A-204ENST00000525428 BLZF1Q9H2G9 400 aa12.52□□□□□ -0.4
CLNS1A-204ENST00000525428 ZBTB3Q9H5J0 574 aa12.52□□□□□ -0.4
CLNS1A-204ENST00000525428 SENP2Q9HC62 589 aa12.52□□□□□ -0.4
CLNS1A-204ENST00000525428 SLC39A2Q9NP94 309 aa12.52□□□□□ -0.4
CLNS1A-204ENST00000525428 STIM2Q9P246 746 aa12.52□□□□□ -0.4
CLNS1A-204ENST00000525428 LUC7L2Q9Y383 392 aaKnown RBP12.52□□□□□ -0.4
CLNS1A-204ENST00000525428 PCDHB6Q9Y5E3 794 aa12.52□□□□□ -0.4
CLNS1A-204ENST00000525428 ACTN4O43707 911 aaKnown RBP12.52□□□□□ -0.41
CLNS1A-204ENST00000525428 COPB1P53618 953 aaKnown RBP12.52□□□□□ -0.41
CLNS1A-204ENST00000525428 ANTXR2P58335 489 aa12.52□□□□□ -0.41
CLNS1A-204ENST00000525428 RBBP5Q15291 538 aaKnown RBP12.52□□□□□ -0.41
CLNS1A-204ENST00000525428 VPS72Q15906 364 aa12.52□□□□□ -0.41
CLNS1A-204ENST00000525428 ODF2Q5BJF6 829 aa12.52□□□□□ -0.41
CLNS1A-204ENST00000525428 BZW1Q7L1Q6 419 aaKnown RBP12.52□□□□□ -0.41
CLNS1A-204ENST00000525428 CREG2Q8IUH2 290 aa12.52□□□□□ -0.41
CLNS1A-204ENST00000525428 EHBP1Q8NDI1 1231 aa12.52□□□□□ -0.41
CLNS1A-204ENST00000525428 OR8K1Q8NGG5 319 aa12.52□□□□□ -0.41
CLNS1A-204ENST00000525428 QTRT2Q9H974 415 aaKnown RBP12.52□□□□□ -0.41
CLNS1A-204ENST00000525428 ACTR5Q9H9F9 607 aaPredicted RBP12.52□□□□□ -0.41
CLNS1A-204ENST00000525428 MYH8P13535 1937 aa12.52□□□□□ -0.41
CLNS1A-204ENST00000525428 PALLDQ8WX93 1383 aa12.52□□□□□ -0.41
CLNS1A-204ENST00000525428 SRCAPQ6ZRS2 3230 aa12.52□□□□□ -0.41
CLNS1A-204ENST00000525428 ATP6V1G2O95670 118 aa12.51□□□□□ -0.41
CLNS1A-204ENST00000525428 VAV2P52735 878 aa12.51□□□□□ -0.41
CLNS1A-204ENST00000525428 RNASE9P60153 205 aaKnown RBP12.51□□□□□ -0.41
CLNS1A-204ENST00000525428 FKBP4Q02790 459 aaKnown RBP eCLIP12.51□□□□□ -0.41
CLNS1A-204ENST00000525428 CUL4BQ13620 913 aa12.51□□□□□ -0.41
CLNS1A-204ENST00000525428 CCDC96Q2M329 555 aa12.51□□□□□ -0.41
CLNS1A-204ENST00000525428 C8orf74Q6P047 294 aa12.51□□□□□ -0.41
CLNS1A-204ENST00000525428 EMBQ6PCB8 327 aa12.51□□□□□ -0.41
CLNS1A-204ENST00000525428 KRT26Q7Z3Y9 468 aa12.51□□□□□ -0.41
CLNS1A-204ENST00000525428 LINS1Q8NG48 757 aa12.51□□□□□ -0.41
CLNS1A-204ENST00000525428 OR2W6PQ8NHA6 318 aa12.51□□□□□ -0.41
CLNS1A-204ENST00000525428 NUP58Q9BVL2 599 aa12.51□□□□□ -0.41
CLNS1A-204ENST00000525428 SLC26A6Q9BXS9 759 aa12.51□□□□□ -0.41
CLNS1A-204ENST00000525428 LEMD3Q9Y2U8 911 aa12.51□□□□□ -0.41
CLNS1A-204ENST00000525428 COL22A1Q8NFW1 1626 aaPredicted RBP12.51□□□□□ -0.41
CLNS1A-204ENST00000525428 A0A087X0B3 334 aa12.51□□□□□ -0.41
CLNS1A-204ENST00000525428 ANP32DO95626 131 aa12.51□□□□□ -0.41
CLNS1A-204ENST00000525428 GUCY2DQ02846 1103 aa12.51□□□□□ -0.41
CLNS1A-204ENST00000525428 TTF1Q15361 905 aaPredicted RBP12.51□□□□□ -0.41
CLNS1A-204ENST00000525428 TRADDQ15628 312 aa12.51□□□□□ -0.41
CLNS1A-204ENST00000525428 IMMTQ16891 758 aaKnown RBP12.51□□□□□ -0.41
CLNS1A-204ENST00000525428 RRAGBQ5VZM2 374 aa12.51□□□□□ -0.41
CLNS1A-204ENST00000525428 TRIML1Q8N9V2 468 aa12.51□□□□□ -0.41
CLNS1A-204ENST00000525428 FAM167BQ9BTA0 163 aa12.51□□□□□ -0.41
CLNS1A-204ENST00000525428 EPB41L5Q9HCM4 733 aa12.51□□□□□ -0.41
CLNS1A-204ENST00000525428 VPS54Q9P1Q0 977 aa12.51□□□□□ -0.41
CLNS1A-204ENST00000525428 SPATA31A6Q5VVP1 1343 aa12.51□□□□□ -0.41
CLNS1A-204ENST00000525428 PHF20L1A8MW92 1017 aa12.51□□□□□ -0.41
CLNS1A-204ENST00000525428 NCK2O43639 380 aa12.51□□□□□ -0.41
CLNS1A-204ENST00000525428 HOXB7P09629 217 aa12.51□□□□□ -0.41
CLNS1A-204ENST00000525428 TOB1P50616 345 aaPredicted RBP12.51□□□□□ -0.41
CLNS1A-204ENST00000525428 SLC8A3P57103 927 aa12.51□□□□□ -0.41
CLNS1A-204ENST00000525428 NR5A1Q13285 461 aa12.51□□□□□ -0.41
CLNS1A-204ENST00000525428 RCSD1Q6JBY9 416 aa12.51□□□□□ -0.41
CLNS1A-204ENST00000525428 NKX2-3Q8TAU0 364 aa12.51□□□□□ -0.41
CLNS1A-204ENST00000525428 OSBP2Q969R2 916 aa12.51□□□□□ -0.41
CLNS1A-204ENST00000525428 HVCN1Q96D96 273 aa12.51□□□□□ -0.41
CLNS1A-204ENST00000525428 SPAG5Q96R06 1193 aa12.51□□□□□ -0.41
CLNS1A-204ENST00000525428 FBXO2Q9UK22 296 aaPredicted RBP12.51□□□□□ -0.41
CLNS1A-204ENST00000525428 TRPC6Q9Y210 931 aa12.51□□□□□ -0.41
CLNS1A-204ENST00000525428 SH3TC1Q8TE82 1336 aa12.5□□□□□ -0.41
CLNS1A-204ENST00000525428 GMNCA6NCL1 334 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms