RNA–Protein interactions for RNA: ENST00000525303.5

TRAPPC4-206, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 654 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-206ENST00000525303 GLT1D1Q96MS3 346 aa11.42□□□□□ -0.58
TRAPPC4-206ENST00000525303 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.42□□□□□ -0.583e-6■■□□□ 14
TRAPPC4-206ENST00000525303 EPB41L4AQ9HCS5 686 aaPredicted RBP11.42□□□□□ -0.58
TRAPPC4-206ENST00000525303 ECHDC1Q9NTX5 307 aa11.42□□□□□ -0.58
TRAPPC4-206ENST00000525303 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.42□□□□□ -0.58
TRAPPC4-206ENST00000525303 TBX21Q9UL17 535 aa11.42□□□□□ -0.58
TRAPPC4-206ENST00000525303 REV3LO60673 3130 aa11.42□□□□□ -0.58
TRAPPC4-206ENST00000525303 MYH6P13533 1939 aa11.42□□□□□ -0.58
TRAPPC4-206ENST00000525303 TRIP12Q14669 1992 aaPredicted RBP11.41□□□□□ -0.58
TRAPPC4-206ENST00000525303 ELP1O95163 1332 aa11.41□□□□□ -0.58
TRAPPC4-206ENST00000525303 GPAA1O43292 621 aa11.41□□□□□ -0.58
TRAPPC4-206ENST00000525303 PRDM1O75626 825 aa11.41□□□□□ -0.58
TRAPPC4-206ENST00000525303 ASGR1P07306 291 aa11.41□□□□□ -0.58
TRAPPC4-206ENST00000525303 CST5P28325 142 aaPredicted RBP11.41□□□□□ -0.58
TRAPPC4-206ENST00000525303 TDO2P48775 406 aa11.41□□□□□ -0.58
TRAPPC4-206ENST00000525303 CCDC144BQ3MJ40 725 aa11.41□□□□□ -0.58
TRAPPC4-206ENST00000525303 TSHZ3Q63HK5 1081 aa11.41□□□□□ -0.58
TRAPPC4-206ENST00000525303 MFSD5Q6N075 450 aa11.41□□□□□ -0.58
TRAPPC4-206ENST00000525303 LRRC47Q8N1G4 583 aaKnown RBP11.41□□□□□ -0.58
TRAPPC4-206ENST00000525303 PCSK9Q8NBP7 692 aaKnown RBP11.41□□□□□ -0.58
TRAPPC4-206ENST00000525303 APPBP2Q92624 585 aa11.41□□□□□ -0.58
TRAPPC4-206ENST00000525303 VTI1AQ96AJ9 217 aa11.41□□□□□ -0.58
TRAPPC4-206ENST00000525303 CEP95Q96GE4 821 aa11.41□□□□□ -0.58
TRAPPC4-206ENST00000525303 ABHD16BQ9H3Z7 469 aa11.41□□□□□ -0.58
TRAPPC4-206ENST00000525303 SPC25Q9HBM1 224 aa11.41□□□□□ -0.58
TRAPPC4-206ENST00000525303 SLC38A10Q9HBR0 1119 aa11.41□□□□□ -0.58
TRAPPC4-206ENST00000525303 FEM1BQ9UK73 627 aa11.41□□□□□ -0.58
TRAPPC4-206ENST00000525303 CHD7Q9P2D1 2997 aa11.4□□□□□ -0.58
TRAPPC4-206ENST00000525303 A0A0U1RQG5 324 aaPredicted RBP11.4□□□□□ -0.58
TRAPPC4-206ENST00000525303 M0R2C6 588 aa11.4□□□□□ -0.58
TRAPPC4-206ENST00000525303 RNF113AO15541 343 aaKnown RBP11.4□□□□□ -0.58
TRAPPC4-206ENST00000525303 APPP05067 770 aa11.4□□□□□ -0.58
TRAPPC4-206ENST00000525303 CDK7P50613 346 aa11.4□□□□□ -0.58
TRAPPC4-206ENST00000525303 GJA9P57773 515 aa11.4□□□□□ -0.58
TRAPPC4-206ENST00000525303 PPIGQ13427 754 aaKnown RBP eCLIP11.4□□□□□ -0.58
TRAPPC4-206ENST00000525303 GNASQ5JWF2 1037 aa11.4□□□□□ -0.58
TRAPPC4-206ENST00000525303 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.4□□□□□ -0.58
TRAPPC4-206ENST00000525303 C16orf59Q7L2K0 433 aa11.4□□□□□ -0.58
TRAPPC4-206ENST00000525303 ARMCX2Q7L311 632 aa11.4□□□□□ -0.58
TRAPPC4-206ENST00000525303 CCDC144CPQ8IYA2 1237 aa11.4□□□□□ -0.58
TRAPPC4-206ENST00000525303 ZNF444Q8N0Y2 327 aaPredicted RBP11.4□□□□□ -0.58
TRAPPC4-206ENST00000525303 USP38Q8NB14 1042 aa11.4□□□□□ -0.58
TRAPPC4-206ENST00000525303 CHST13Q8NET6 341 aa11.4□□□□□ -0.58
TRAPPC4-206ENST00000525303 MKL1Q969V6 931 aa11.4□□□□□ -0.58
TRAPPC4-206ENST00000525303 TIFAQ96CG3 184 aa11.4□□□□□ -0.58
TRAPPC4-206ENST00000525303 PPP1R12CQ9BZL4 782 aa11.4□□□□□ -0.58
TRAPPC4-206ENST00000525303 UPF3AQ9H1J1 476 aaKnown RBP11.4□□□□□ -0.58
TRAPPC4-206ENST00000525303 ZNF576Q9H609 170 aa11.4□□□□□ -0.58
TRAPPC4-206ENST00000525303 ZNF287Q9HBT7 754 aa11.4□□□□□ -0.58
TRAPPC4-206ENST00000525303 HOMER2Q9NSB8 354 aa11.4□□□□□ -0.58
TRAPPC4-206ENST00000525303 MTMR4Q9NYA4 1195 aa11.4□□□□□ -0.58
TRAPPC4-206ENST00000525303 FBXO40Q9UH90 709 aa11.4□□□□□ -0.58
TRAPPC4-206ENST00000525303 GRXCR1A8MXD5 290 aa11.39□□□□□ -0.59
TRAPPC4-206ENST00000525303 ARVCFO00192 962 aa11.39□□□□□ -0.59
TRAPPC4-206ENST00000525303 TTLL1O95922 423 aa11.39□□□□□ -0.59
TRAPPC4-206ENST00000525303 BMP3P12645 472 aa11.39□□□□□ -0.59
TRAPPC4-206ENST00000525303 CSF2RAP15509 400 aa11.39□□□□□ -0.59
TRAPPC4-206ENST00000525303 GNAT2P19087 354 aa11.39□□□□□ -0.59
TRAPPC4-206ENST00000525303 OAZ1P54368 228 aa11.39□□□□□ -0.59
TRAPPC4-206ENST00000525303 CNTN2Q02246 1040 aa11.39□□□□□ -0.59
TRAPPC4-206ENST00000525303 TMEM240Q5SV17 173 aa11.39□□□□□ -0.59
TRAPPC4-206ENST00000525303 SLFN13Q68D06 897 aa11.39□□□□□ -0.59
TRAPPC4-206ENST00000525303 FAM126BQ8IXS8 530 aa11.39□□□□□ -0.59
TRAPPC4-206ENST00000525303 IFNL3Q8IZI9 196 aa11.39□□□□□ -0.59
TRAPPC4-206ENST00000525303 GMCL1P1Q8NEA9 526 aa11.39□□□□□ -0.59
TRAPPC4-206ENST00000525303 EXOC6Q8TAG9 804 aa11.39□□□□□ -0.59
TRAPPC4-206ENST00000525303 SYMPKQ92797 1274 aaKnown RBP11.39□□□□□ -0.59
TRAPPC4-206ENST00000525303 GPATCH3Q96I76 525 aa11.39□□□□□ -0.59
TRAPPC4-206ENST00000525303 KATNBL1Q9H079 304 aa11.39□□□□□ -0.59
TRAPPC4-206ENST00000525303 ISY1Q9ULR0 285 aaKnown RBP11.39□□□□□ -0.59
TRAPPC4-206ENST00000525303 SYNPO2Q9UMS6 1093 aa11.39□□□□□ -0.59
TRAPPC4-206ENST00000525303 PLIN4Q96Q06 1357 aa11.39□□□□□ -0.59
TRAPPC4-206ENST00000525303 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.38□□□□□ -0.59
TRAPPC4-206ENST00000525303 CTAGE5O15320 804 aa11.38□□□□□ -0.59
TRAPPC4-206ENST00000525303 TLR3O15455 904 aaKnown RBP11.38□□□□□ -0.59
TRAPPC4-206ENST00000525303 ZFYP08048 801 aaPredicted RBP11.38□□□□□ -0.59
TRAPPC4-206ENST00000525303 TSPY3P0CV98 308 aa11.38□□□□□ -0.59
TRAPPC4-206ENST00000525303 TSPY8P0CW00 308 aa11.38□□□□□ -0.59
TRAPPC4-206ENST00000525303 ACRP10323 421 aa11.38□□□□□ -0.59
TRAPPC4-206ENST00000525303 PBX2P40425 430 aa11.38□□□□□ -0.59
TRAPPC4-206ENST00000525303 BEX3Q00994 111 aa11.38□□□□□ -0.59
TRAPPC4-206ENST00000525303 ERICH6BQ5W0A0 696 aa11.38□□□□□ -0.59
TRAPPC4-206ENST00000525303 CCDC174Q6PII3 467 aa11.38□□□□□ -0.59
TRAPPC4-206ENST00000525303 CCDC129Q6ZRS4 1044 aa11.38□□□□□ -0.59
TRAPPC4-206ENST00000525303 TMEM199Q8N511 208 aa11.38□□□□□ -0.59
TRAPPC4-206ENST00000525303 CHMP4CQ96CF2 233 aa11.38□□□□□ -0.59
TRAPPC4-206ENST00000525303 PBX4Q9BYU1 374 aa11.38□□□□□ -0.59
TRAPPC4-206ENST00000525303 ACAD9Q9H845 621 aa11.38□□□□□ -0.59
TRAPPC4-206ENST00000525303 TANC1Q9C0D5 1861 aa11.38□□□□□ -0.59
TRAPPC4-206ENST00000525303 ASTN1O14525 1302 aa11.37□□□□□ -0.59
TRAPPC4-206ENST00000525303 TRANK1O15050 2925 aa11.37□□□□□ -0.59
TRAPPC4-206ENST00000525303 MYH7BA7E2Y1 1941 aa11.37□□□□□ -0.59
TRAPPC4-206ENST00000525303 PATL2C9JE40 543 aaKnown RBP11.37□□□□□ -0.59
TRAPPC4-206ENST00000525303 TMEM232C9JQI7 657 aa11.37□□□□□ -0.59
TRAPPC4-206ENST00000525303 CD4P01730 458 aa11.37□□□□□ -0.59
TRAPPC4-206ENST00000525303 FDX1P10109 184 aa11.37□□□□□ -0.59
TRAPPC4-206ENST00000525303 STAT2P52630 851 aa11.37□□□□□ -0.59
TRAPPC4-206ENST00000525303 IRX6P78412 446 aaPredicted RBP11.37□□□□□ -0.59
TRAPPC4-206ENST00000525303 TNFAIP2Q03169 654 aa11.37□□□□□ -0.59
TRAPPC4-206ENST00000525303 IKQ13123 557 aaPredicted RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms