RNA–Protein interactions for RNA: ENST00000525132.1

CSDE1-209, Transcript of cold shock domain containing E1, humanhuman

TSL 5

Gene CSDE1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-209ENST00000525132 ZNF417Q8TAU3 575 aa4.66□□□□□ -1.66
CSDE1-209ENST00000525132 TIFAQ96CG3 184 aa4.66□□□□□ -1.66
CSDE1-209ENST00000525132 PNMA5Q96PV4 448 aa4.66□□□□□ -1.66
CSDE1-209ENST00000525132 ZNF587Q96SQ5 575 aaPredicted RBP4.66□□□□□ -1.66
CSDE1-209ENST00000525132 FNDC3AQ9Y2H6 1198 aaKnown RBP4.66□□□□□ -1.66
CSDE1-209ENST00000525132 RAI2Q9Y5P3 530 aa4.66□□□□□ -1.66
CSDE1-209ENST00000525132 ITPR1Q14643 2758 aa4.66□□□□□ -1.66
CSDE1-209ENST00000525132 IFT172Q9UG01 1749 aa4.66□□□□□ -1.66
CSDE1-209ENST00000525132 IQGAP3Q86VI3 1631 aa4.65□□□□□ -1.66
CSDE1-209ENST00000525132 KMT2EQ8IZD2 1858 aa4.65□□□□□ -1.66
CSDE1-209ENST00000525132 LOC102724428A0A0B4J2F2 783 aa4.65□□□□□ -1.67
CSDE1-209ENST00000525132 E9PSI1 815 aa4.65□□□□□ -1.67
CSDE1-209ENST00000525132 GNB5O14775 395 aa4.65□□□□□ -1.67
CSDE1-209ENST00000525132 SIK1P57059 783 aa4.65□□□□□ -1.67
CSDE1-209ENST00000525132 EHHADHQ08426 723 aa4.65□□□□□ -1.67
CSDE1-209ENST00000525132 RRS1Q15050 365 aaKnown RBP4.65□□□□□ -1.67
CSDE1-209ENST00000525132 PKN1Q16512 942 aa4.65□□□□□ -1.67
CSDE1-209ENST00000525132 PCSK7Q16549 785 aa4.65□□□□□ -1.67
CSDE1-209ENST00000525132 PEAR1Q5VY43 1037 aaPredicted RBP4.65□□□□□ -1.67
CSDE1-209ENST00000525132 TMC7Q7Z402 723 aa4.65□□□□□ -1.67
CSDE1-209ENST00000525132 SNX29Q8TEQ0 813 aa4.65□□□□□ -1.67
CSDE1-209ENST00000525132 HERVK_113Q902F9 699 aa4.65□□□□□ -1.67
CSDE1-209ENST00000525132 SCARF2Q96GP6 870 aaPredicted RBP4.65□□□□□ -1.67
CSDE1-209ENST00000525132 DEFB118Q96PH6 123 aa4.65□□□□□ -1.67
CSDE1-209ENST00000525132 ARHGAP39Q9C0H5 1083 aa4.65□□□□□ -1.67
CSDE1-209ENST00000525132 BIN2Q9UBW5 565 aaPredicted RBP4.65□□□□□ -1.67
CSDE1-209ENST00000525132 FOXD3Q9UJU5 478 aaPredicted RBP4.65□□□□□ -1.67
CSDE1-209ENST00000525132 MKL2Q9ULH7 1088 aa4.65□□□□□ -1.67
CSDE1-209ENST00000525132 COG5Q9UP83 839 aa4.65□□□□□ -1.67
CSDE1-209ENST00000525132 TRIOO75962 3097 aa4.65□□□□□ -1.67
CSDE1-209ENST00000525132 SBNO2Q9Y2G9 1366 aa4.65□□□□□ -1.67
CSDE1-209ENST00000525132 CACNA1SQ13698 1873 aa4.64□□□□□ -1.67
CSDE1-209ENST00000525132 IGSF10Q6WRI0 2623 aa4.64□□□□□ -1.67
CSDE1-209ENST00000525132 BCORQ6W2J9 1755 aa4.64□□□□□ -1.67
CSDE1-209ENST00000525132 UBE2Q2LH0YL09 131 aa4.64□□□□□ -1.67
CSDE1-209ENST00000525132 IGF2BP3O00425 579 aaKnown RBP eCLIP4.64□□□□□ -1.67
CSDE1-209ENST00000525132 TREHO43280 583 aa4.64□□□□□ -1.67
CSDE1-209ENST00000525132 MAFO75444 373 aaPredicted RBP4.64□□□□□ -1.67
CSDE1-209ENST00000525132 PRB1P04280 392 aa4.64□□□□□ -1.67
CSDE1-209ENST00000525132 PSAPP07602 524 aa4.64□□□□□ -1.67
CSDE1-209ENST00000525132 TM4SF1P30408 202 aa4.64□□□□□ -1.67
CSDE1-209ENST00000525132 IARSP41252 1262 aaKnown RBP4.64□□□□□ -1.67
CSDE1-209ENST00000525132 PLA2G4EQ3MJ16 856 aa4.64□□□□□ -1.67
CSDE1-209ENST00000525132 PSAPL1Q6NUJ1 521 aa4.64□□□□□ -1.67
CSDE1-209ENST00000525132 DNAJC14Q6Y2X3 702 aaPredicted RBP4.64□□□□□ -1.67
CSDE1-209ENST00000525132 SND1Q7KZF4 910 aaKnown RBP eCLIP4.64□□□□□ -1.67
CSDE1-209ENST00000525132 ZNF438Q7Z4V0 828 aa4.64□□□□□ -1.67
CSDE1-209ENST00000525132 BEND7Q8N7W2 519 aaPredicted RBP4.64□□□□□ -1.67
CSDE1-209ENST00000525132 GLIS3Q8NEA6 775 aa4.64□□□□□ -1.67
CSDE1-209ENST00000525132 NEDD1Q8NHV4 660 aa4.64□□□□□ -1.67
CSDE1-209ENST00000525132 NSUN5Q96P11 429 aaKnown RBP4.64□□□□□ -1.67
CSDE1-209ENST00000525132 SPOCK3Q9BQ16 436 aa4.64□□□□□ -1.67
CSDE1-209ENST00000525132 ZFYVE28Q9HCC9 887 aa4.64□□□□□ -1.67
CSDE1-209ENST00000525132 SRP68Q9UHB9 627 aaKnown RBP4.64□□□□□ -1.67
CSDE1-209ENST00000525132 DCTN4Q9UJW0 460 aa4.64□□□□□ -1.67
CSDE1-209ENST00000525132 KIF24Q5T7B8 1368 aa4.64□□□□□ -1.67
CSDE1-209ENST00000525132 EP300Q09472 2414 aaPredicted RBP4.63□□□□□ -1.67
CSDE1-209ENST00000525132 J3QW42 95 aa4.63□□□□□ -1.67
CSDE1-209ENST00000525132 MSTNO14793 375 aa4.63□□□□□ -1.67
CSDE1-209ENST00000525132 EREGO14944 169 aa4.63□□□□□ -1.67
CSDE1-209ENST00000525132 IGSF3O75054 1194 aa4.63□□□□□ -1.67
CSDE1-209ENST00000525132 COBLO75128 1261 aa4.63□□□□□ -1.67
CSDE1-209ENST00000525132 PROCP04070 461 aa4.63□□□□□ -1.67
CSDE1-209ENST00000525132 ACPPP15309 386 aa4.63□□□□□ -1.67
CSDE1-209ENST00000525132 ALAS2P22557 587 aa4.63□□□□□ -1.67
CSDE1-209ENST00000525132 AVPR2P30518 371 aa4.63□□□□□ -1.67
CSDE1-209ENST00000525132 HOXA10P31260 410 aaPredicted RBP4.63□□□□□ -1.67
CSDE1-209ENST00000525132 GRK4P32298 578 aa4.63□□□□□ -1.67
CSDE1-209ENST00000525132 ATP11AP98196 1134 aa4.63□□□□□ -1.67
CSDE1-209ENST00000525132 ITPK1Q13572 414 aa4.63□□□□□ -1.67
CSDE1-209ENST00000525132 FAM35AQ86V20 835 aa4.63□□□□□ -1.67
CSDE1-209ENST00000525132 FBXL6Q8N531 539 aa4.63□□□□□ -1.67
CSDE1-209ENST00000525132 JDP2Q8WYK2 163 aa4.63□□□□□ -1.67
CSDE1-209ENST00000525132 PLD4Q96BZ4 506 aa4.63□□□□□ -1.67
CSDE1-209ENST00000525132 DZANK1Q9NVP4 752 aa4.63□□□□□ -1.67
CSDE1-209ENST00000525132 DSPP15924 2871 aaKnown RBP4.63□□□□□ -1.67
CSDE1-209ENST00000525132 ZFHX3Q15911 3703 aa4.63□□□□□ -1.67
CSDE1-209ENST00000525132 A0A0G2JMZ2 1700 aa4.63□□□□□ -1.67
CSDE1-209ENST00000525132 SPTA1P02549 2419 aa4.63□□□□□ -1.67
CSDE1-209ENST00000525132 RP1L1Q8IWN7 2480 aaPredicted RBP4.63□□□□□ -1.67
CSDE1-209ENST00000525132 FREM2Q5SZK8 3169 aa4.62□□□□□ -1.67
CSDE1-209ENST00000525132 KRBA1A5PL33 1030 aa4.62□□□□□ -1.67
CSDE1-209ENST00000525132 PHF20L1A8MW92 1017 aa4.62□□□□□ -1.67
CSDE1-209ENST00000525132 NDUFB5O43674 189 aa4.62□□□□□ -1.67
CSDE1-209ENST00000525132 LILRB5O75023 590 aa4.62□□□□□ -1.67
CSDE1-209ENST00000525132 CPB1P15086 417 aa4.62□□□□□ -1.67
CSDE1-209ENST00000525132 MARSP56192 900 aaKnown RBP4.62□□□□□ -1.67
CSDE1-209ENST00000525132 HYAL2Q12891 473 aa4.62□□□□□ -1.67
CSDE1-209ENST00000525132 MCTP2Q6DN12 878 aa4.62□□□□□ -1.67
CSDE1-209ENST00000525132 ZNF605Q86T29 641 aa4.62□□□□□ -1.67
CSDE1-209ENST00000525132 PDZD3Q86UT5 571 aa4.62□□□□□ -1.67
CSDE1-209ENST00000525132 GALNT12Q8IXK2 581 aa4.62□□□□□ -1.67
CSDE1-209ENST00000525132 DMRTB1Q96MA1 342 aa4.62□□□□□ -1.67
CSDE1-209ENST00000525132 ASB16Q96NS5 453 aa4.62□□□□□ -1.67
CSDE1-209ENST00000525132 HHIPQ96QV1 700 aa4.62□□□□□ -1.67
CSDE1-209ENST00000525132 BHLHE41Q9C0J9 482 aaPredicted RBP4.62□□□□□ -1.67
CSDE1-209ENST00000525132 ADAM19Q9H013 955 aa4.62□□□□□ -1.67
CSDE1-209ENST00000525132 CLMPQ9H6B4 373 aa4.62□□□□□ -1.67
CSDE1-209ENST00000525132 KANSL3Q9P2N6 904 aa4.62□□□□□ -1.67
CSDE1-209ENST00000525132 BRPF3Q9ULD4 1205 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms