RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 RAB44Q7Z6P3 723 aaPredicted RBP9.44□□□□□ -0.9
NEDD8-203ENST00000524927 ATXN2LQ8WWM7 1075 aaKnown RBP9.44□□□□□ -0.9
NEDD8-203ENST00000524927 SLC30A3Q99726 388 aa9.44□□□□□ -0.9
NEDD8-203ENST00000524927 KANSL3Q9P2N6 904 aa9.44□□□□□ -0.9
NEDD8-203ENST00000524927 STARD13Q9Y3M8 1113 aa9.44□□□□□ -0.9
NEDD8-203ENST00000524927 AK5Q9Y6K8 562 aa9.44□□□□□ -0.9
NEDD8-203ENST00000524927 SSC5DA1L4H1 1573 aa9.43□□□□□ -0.9
NEDD8-203ENST00000524927 ZBTB48P10074 688 aaPredicted RBP9.43□□□□□ -0.9
NEDD8-203ENST00000524927 ANGEL2Q5VTE6 544 aaKnown RBP9.43□□□□□ -0.9
NEDD8-203ENST00000524927 SYT9Q86SS6 491 aa9.43□□□□□ -0.9
NEDD8-203ENST00000524927 GALNT12Q8IXK2 581 aa9.43□□□□□ -0.9
NEDD8-203ENST00000524927 OR13H1Q8NG92 308 aa9.43□□□□□ -0.9
NEDD8-203ENST00000524927 RPGRQ92834 1020 aaKnown RBP9.43□□□□□ -0.9
NEDD8-203ENST00000524927 CRAMP1Q96RY5 1269 aa9.43□□□□□ -0.9
NEDD8-203ENST00000524927 UHRF1Q96T88 793 aaPredicted RBP9.43□□□□□ -0.9
NEDD8-203ENST00000524927 TPSG1Q9NRR2 321 aa9.43□□□□□ -0.9
NEDD8-203ENST00000524927 IGSF5Q9NSI5 407 aa9.43□□□□□ -0.9
NEDD8-203ENST00000524927 ZFATQ9P243 1243 aa9.43□□□□□ -0.9
NEDD8-203ENST00000524927 RIC1Q4ADV7 1423 aa9.42□□□□□ -0.9
NEDD8-203ENST00000524927 ASTN2O75129 1339 aaPredicted RBP9.42□□□□□ -0.9
NEDD8-203ENST00000524927 YDJCA8MPS7 323 aa9.42□□□□□ -0.9
NEDD8-203ENST00000524927 SPATA31C1P0DKV0 1188 aa9.42□□□□□ -0.9
NEDD8-203ENST00000524927 FOSL2P15408 326 aa9.42□□□□□ -0.9
NEDD8-203ENST00000524927 PTPN12Q05209 780 aaKnown RBP9.42□□□□□ -0.9
NEDD8-203ENST00000524927 U2AF1L4Q8WU68 220 aaKnown RBP9.42□□□□□ -0.9
NEDD8-203ENST00000524927 SLC52A2Q9HAB3 445 aa9.42□□□□□ -0.9
NEDD8-203ENST00000524927 ZMYND8Q9ULU4 1186 aaPredicted RBP9.42□□□□□ -0.9
NEDD8-203ENST00000524927 ZNF652Q9Y2D9 606 aa9.42□□□□□ -0.9
NEDD8-203ENST00000524927 FAM205AQ6ZU69 1335 aa9.41□□□□□ -0.9
NEDD8-203ENST00000524927 ELOA3CA0A087WX78 387 aaPredicted RBP9.41□□□□□ -0.9
NEDD8-203ENST00000524927 ELOA3DA6NLF2 546 aaPredicted RBP9.41□□□□□ -0.9
NEDD8-203ENST00000524927 PSMD14O00487 310 aa9.41□□□□□ -0.9
NEDD8-203ENST00000524927 GIPC1O14908 333 aa9.41□□□□□ -0.9
NEDD8-203ENST00000524927 CCL5P13501 91 aa9.41□□□□□ -0.9
NEDD8-203ENST00000524927 EDN3P14138 238 aa9.41□□□□□ -0.9
NEDD8-203ENST00000524927 NF2P35240 595 aa9.41□□□□□ -0.9
NEDD8-203ENST00000524927 ELOA3BQ3SY89 546 aa9.41□□□□□ -0.9
NEDD8-203ENST00000524927 LDLRAD1Q5T700 205 aa9.41□□□□□ -0.9
NEDD8-203ENST00000524927 ARMC9Q7Z3E5 817 aa9.41□□□□□ -0.9
NEDD8-203ENST00000524927 ELOA3Q8NG57 546 aa9.41□□□□□ -0.9
NEDD8-203ENST00000524927 MYLIPQ8WY64 445 aa9.41□□□□□ -0.9
NEDD8-203ENST00000524927 RNF208Q9H0X6 261 aa9.41□□□□□ -0.9
NEDD8-203ENST00000524927 TLR7Q9NYK1 1049 aaKnown RBP9.41□□□□□ -0.9
NEDD8-203ENST00000524927 ATP6V0A2Q9Y487 856 aa9.41□□□□□ -0.9
NEDD8-203ENST00000524927 LAMB1P07942 1786 aa9.4□□□□□ -0.9
NEDD8-203ENST00000524927 SCAMP3O14828 347 aaKnown RBP9.4□□□□□ -0.9
NEDD8-203ENST00000524927 SGPL1O95470 568 aa9.4□□□□□ -0.9
NEDD8-203ENST00000524927 PLAURQ03405 335 aa9.4□□□□□ -0.9
NEDD8-203ENST00000524927 SLC39A6Q13433 755 aa9.4□□□□□ -0.9
NEDD8-203ENST00000524927 TMEM31Q5JXX7 168 aa9.4□□□□□ -0.9
NEDD8-203ENST00000524927 DPP8Q6V1X1 898 aaPredicted RBP9.4□□□□□ -0.9
NEDD8-203ENST00000524927 NCAPG2Q86XI2 1143 aa9.4□□□□□ -0.9
NEDD8-203ENST00000524927 RBM17Q96I25 401 aaKnown RBP9.4□□□□□ -0.9
NEDD8-203ENST00000524927 ZNF496Q96IT1 587 aaPredicted RBP9.4□□□□□ -0.9
NEDD8-203ENST00000524927 ASB2Q96Q27 587 aa9.4□□□□□ -0.9
NEDD8-203ENST00000524927 TEX13AQ9BXU3 409 aaPredicted RBP9.4□□□□□ -0.9
NEDD8-203ENST00000524927 IGFLR1Q9H665 355 aa9.4□□□□□ -0.9
NEDD8-203ENST00000524927 C12orf49Q9H741 205 aa9.4□□□□□ -0.9
NEDD8-203ENST00000524927 CDH23Q9H251 3354 aa9.39□□□□□ -0.91
NEDD8-203ENST00000524927 MAP3K6O95382 1288 aa9.39□□□□□ -0.91
NEDD8-203ENST00000524927 HYAL2Q12891 473 aa9.39□□□□□ -0.91
NEDD8-203ENST00000524927 DHX32Q7L7V1 743 aaKnown RBP9.39□□□□□ -0.91
NEDD8-203ENST00000524927 SLC51AQ86UW1 340 aa9.39□□□□□ -0.91
NEDD8-203ENST00000524927 C7orf61Q8IZ16 206 aa9.39□□□□□ -0.91
NEDD8-203ENST00000524927 OSBPL7Q9BZF2 842 aa9.39□□□□□ -0.91
NEDD8-203ENST00000524927 EHD4Q9H223 541 aa9.39□□□□□ -0.91
NEDD8-203ENST00000524927 PPP4R2Q9NY27 417 aa9.39□□□□□ -0.91
NEDD8-203ENST00000524927 NIP7Q9Y221 180 aaKnown RBP eCLIP9.39□□□□□ -0.91
NEDD8-203ENST00000524927 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.39□□□□□ -0.91
NEDD8-203ENST00000524927 TCERG1O14776 1098 aaKnown RBP9.38□□□□□ -0.91
NEDD8-203ENST00000524927 PPM1GO15355 546 aaPredicted RBP9.38□□□□□ -0.91
NEDD8-203ENST00000524927 TBC1D8BQ0IIM8 1120 aa9.38□□□□□ -0.91
NEDD8-203ENST00000524927 KIF22Q14807 665 aa9.38□□□□□ -0.91
NEDD8-203ENST00000524927 NXPE4Q6UWF7 544 aa9.38□□□□□ -0.91
NEDD8-203ENST00000524927 KRTAP1-3Q8IUG1 177 aa9.38□□□□□ -0.91
NEDD8-203ENST00000524927 BCO2Q9BYV7 579 aa9.38□□□□□ -0.91
NEDD8-203ENST00000524927 LATS2Q9NRM7 1088 aa9.38□□□□□ -0.91
NEDD8-203ENST00000524927 SALL4Q9UJQ4 1053 aa9.38□□□□□ -0.91
NEDD8-203ENST00000524927 ZDBF2Q9HCK1 2354 aa9.38□□□□□ -0.91
NEDD8-203ENST00000524927 CACNA1BQ00975 2339 aa9.38□□□□□ -0.91
NEDD8-203ENST00000524927 BAHCC1Q9P281 2608 aa9.37□□□□□ -0.91
NEDD8-203ENST00000524927 ALPK3Q96L96 1907 aa9.37□□□□□ -0.91
NEDD8-203ENST00000524927 M0R082 166 aa9.37□□□□□ -0.91
NEDD8-203ENST00000524927 ALBP02768 609 aa9.37□□□□□ -0.91
NEDD8-203ENST00000524927 GRK4P32298 578 aa9.37□□□□□ -0.91
NEDD8-203ENST00000524927 SOX18P35713 384 aa9.37□□□□□ -0.91
NEDD8-203ENST00000524927 UBXN2AP68543 259 aa9.37□□□□□ -0.91
NEDD8-203ENST00000524927 GRIK4Q16099 956 aa9.37□□□□□ -0.91
NEDD8-203ENST00000524927 ZNF417Q8TAU3 575 aa9.37□□□□□ -0.91
NEDD8-203ENST00000524927 CRELD1Q96HD1 420 aa9.37□□□□□ -0.91
NEDD8-203ENST00000524927 SPACA7Q96KW9 195 aa9.37□□□□□ -0.91
NEDD8-203ENST00000524927 NSUN5Q96P11 429 aaKnown RBP9.37□□□□□ -0.91
NEDD8-203ENST00000524927 ZNF587Q96SQ5 575 aaPredicted RBP9.37□□□□□ -0.91
NEDD8-203ENST00000524927 FAM8A1Q9UBU6 413 aa9.37□□□□□ -0.91
NEDD8-203ENST00000524927 CHD8Q9HCK8 2581 aa9.36□□□□□ -0.91
NEDD8-203ENST00000524927 A0A1W2PP55 124 aa9.36□□□□□ -0.91
NEDD8-203ENST00000524927 ADARB2-AS1A8MUL3 147 aa9.36□□□□□ -0.91
NEDD8-203ENST00000524927 SYN1P17600 705 aa9.36□□□□□ -0.91
NEDD8-203ENST00000524927 ZNF280AP59817 542 aaPredicted RBP9.36□□□□□ -0.91
NEDD8-203ENST00000524927 MRPS5P82675 430 aaKnown RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms