RNA–Protein interactions for RNA: ENST00000524627.5

SF3B2-203, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-203ENST00000524627 ARMCX2Q7L311 632 aa15.21■□□□□ 0.03
SF3B2-203ENST00000524627 ZNF444Q8N0Y2 327 aaPredicted RBP15.21■□□□□ 0.03
SF3B2-203ENST00000524627 KBTBD3Q8NAB2 608 aa15.21■□□□□ 0.03
SF3B2-203ENST00000524627 APPBP2Q92624 585 aa15.21■□□□□ 0.03
SF3B2-203ENST00000524627 PPP1R12CQ9BZL4 782 aa15.21■□□□□ 0.03
SF3B2-203ENST00000524627 HOMER2Q9NSB8 354 aa15.21■□□□□ 0.03
SF3B2-203ENST00000524627 FBXO40Q9UH90 709 aa15.21■□□□□ 0.03
SF3B2-203ENST00000524627 FEM1BQ9UK73 627 aa15.21■□□□□ 0.03
SF3B2-203ENST00000524627 ISY1Q9ULR0 285 aaKnown RBP15.21■□□□□ 0.03
SF3B2-203ENST00000524627 A0A0U1RQG5 324 aaPredicted RBP15.2■□□□□ 0.02
SF3B2-203ENST00000524627 ARVCFO00192 962 aa15.2■□□□□ 0.02
SF3B2-203ENST00000524627 RNF113AO15541 343 aaKnown RBP15.2■□□□□ 0.02
SF3B2-203ENST00000524627 GPAA1O43292 621 aa15.2■□□□□ 0.02
SF3B2-203ENST00000524627 TTLL1O95922 423 aa15.2■□□□□ 0.02
SF3B2-203ENST00000524627 CSF2RAP15509 400 aa15.2■□□□□ 0.02
SF3B2-203ENST00000524627 GJA9P57773 515 aa15.2■□□□□ 0.02
SF3B2-203ENST00000524627 TMEM240Q5SV17 173 aa15.2■□□□□ 0.02
SF3B2-203ENST00000524627 CCDC174Q6PII3 467 aa15.2■□□□□ 0.02
SF3B2-203ENST00000524627 CCDC129Q6ZRS4 1044 aa15.2■□□□□ 0.02
SF3B2-203ENST00000524627 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.2■□□□□ 0.02
SF3B2-203ENST00000524627 C16orf59Q7L2K0 433 aa15.2■□□□□ 0.02
SF3B2-203ENST00000524627 CCDC144CPQ8IYA2 1237 aa15.2■□□□□ 0.02
SF3B2-203ENST00000524627 CHST13Q8NET6 341 aa15.2■□□□□ 0.02
SF3B2-203ENST00000524627 SYMPKQ92797 1274 aaKnown RBP15.2■□□□□ 0.02
SF3B2-203ENST00000524627 MKL1Q969V6 931 aa15.2■□□□□ 0.02
SF3B2-203ENST00000524627 UPF3AQ9H1J1 476 aaKnown RBP15.2■□□□□ 0.02
SF3B2-203ENST00000524627 ZNF287Q9HBT7 754 aa15.2■□□□□ 0.02
SF3B2-203ENST00000524627 MTMR4Q9NYA4 1195 aa15.2■□□□□ 0.02
SF3B2-203ENST00000524627 GRXCR1A8MXD5 290 aa15.19■□□□□ 0.02
SF3B2-203ENST00000524627 M0R2C6 588 aa15.19■□□□□ 0.02
SF3B2-203ENST00000524627 ACRP10323 421 aa15.19■□□□□ 0.02
SF3B2-203ENST00000524627 PBX2P40425 430 aa15.19■□□□□ 0.02
SF3B2-203ENST00000524627 CNTN2Q02246 1040 aa15.19■□□□□ 0.02
SF3B2-203ENST00000524627 SLFN13Q68D06 897 aa15.19■□□□□ 0.02
SF3B2-203ENST00000524627 NOL8Q76FK4 1167 aaKnown RBP15.19■□□□□ 0.02
SF3B2-203ENST00000524627 TMEM199Q8N511 208 aa15.19■□□□□ 0.02
SF3B2-203ENST00000524627 PBX4Q9BYU1 374 aa15.19■□□□□ 0.02
SF3B2-203ENST00000524627 PRDM6Q9NQX0 595 aa15.19■□□□□ 0.02
SF3B2-203ENST00000524627 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.18■□□□□ 0.02
SF3B2-203ENST00000524627 TMEM232C9JQI7 657 aa15.18■□□□□ 0.02
SF3B2-203ENST00000524627 CTAGE5O15320 804 aa15.18■□□□□ 0.02
SF3B2-203ENST00000524627 TLR3O15455 904 aaKnown RBP15.18■□□□□ 0.02
SF3B2-203ENST00000524627 TSPY3P0CV98 308 aa15.18■□□□□ 0.02
SF3B2-203ENST00000524627 TSPY8P0CW00 308 aa15.18■□□□□ 0.02
SF3B2-203ENST00000524627 BMP3P12645 472 aa15.18■□□□□ 0.02
SF3B2-203ENST00000524627 GNAT2P19087 354 aa15.18■□□□□ 0.02
SF3B2-203ENST00000524627 OAZ1P54368 228 aa15.18■□□□□ 0.02
SF3B2-203ENST00000524627 BEX3Q00994 111 aa15.18■□□□□ 0.02
SF3B2-203ENST00000524627 C20orf194Q5TEA3 1177 aa15.18■□□□□ 0.02
SF3B2-203ENST00000524627 ZNF365Q70YC5 407 aa15.18■□□□□ 0.02
SF3B2-203ENST00000524627 FAM126BQ8IXS8 530 aa15.18■□□□□ 0.02
SF3B2-203ENST00000524627 GMCL1P1Q8NEA9 526 aa15.18■□□□□ 0.02
SF3B2-203ENST00000524627 PPM1EQ8WY54 764 aa15.18■□□□□ 0.02
SF3B2-203ENST00000524627 CHMP4CQ96CF2 233 aa15.18■□□□□ 0.02
SF3B2-203ENST00000524627 GPATCH3Q96I76 525 aa15.18■□□□□ 0.02
SF3B2-203ENST00000524627 KATNBL1Q9H079 304 aa15.18■□□□□ 0.02
SF3B2-203ENST00000524627 MYO9BQ13459 2157 aa15.17■□□□□ 0.02
SF3B2-203ENST00000524627 ZFYP08048 801 aaPredicted RBP15.17■□□□□ 0.02
SF3B2-203ENST00000524627 CYP2C18P33260 490 aa15.17■□□□□ 0.02
SF3B2-203ENST00000524627 TNFAIP2Q03169 654 aa15.17■□□□□ 0.02
SF3B2-203ENST00000524627 IKQ13123 557 aaPredicted RBP15.17■□□□□ 0.02
SF3B2-203ENST00000524627 TJAP1Q5JTD0 557 aa15.17■□□□□ 0.02
SF3B2-203ENST00000524627 RASIP1Q5U651 963 aa15.17■□□□□ 0.02
SF3B2-203ENST00000524627 PSRC1Q6PGN9 363 aaPredicted RBP15.17■□□□□ 0.02
SF3B2-203ENST00000524627 GAS2L1Q99501 681 aaPredicted RBP15.17■□□□□ 0.02
SF3B2-203ENST00000524627 PRDM12Q9H4Q4 367 aa15.17■□□□□ 0.02
SF3B2-203ENST00000524627 ACAD9Q9H845 621 aa15.17■□□□□ 0.02
SF3B2-203ENST00000524627 RCAN3Q9UKA8 241 aa15.17■□□□□ 0.02
SF3B2-203ENST00000524627 SYNPO2Q9UMS6 1093 aa15.17■□□□□ 0.02
SF3B2-203ENST00000524627 CHD9Q3L8U1 2897 aa15.16■□□□□ 0.02
SF3B2-203ENST00000524627 PLIN4Q96Q06 1357 aa15.16■□□□□ 0.02
SF3B2-203ENST00000524627 PATL2C9JE40 543 aaKnown RBP15.16■□□□□ 0.02
SF3B2-203ENST00000524627 STAT2P52630 851 aa15.16■□□□□ 0.02
SF3B2-203ENST00000524627 CXCL17Q6UXB2 119 aa15.16■□□□□ 0.02
SF3B2-203ENST00000524627 IFNL3Q8IZI9 196 aa15.16■□□□□ 0.02
SF3B2-203ENST00000524627 FAM133AQ8N9E0 248 aa15.16■□□□□ 0.02
SF3B2-203ENST00000524627 NEDD1Q8NHV4 660 aa15.16■□□□□ 0.02
SF3B2-203ENST00000524627 AGBL1Q96MI9 1066 aa15.16■□□□□ 0.02
SF3B2-203ENST00000524627 A1CFQ9NQ94 594 aaKnown RBP15.16■□□□□ 0.02
SF3B2-203ENST00000524627 RNF146Q9NTX7 359 aa15.16■□□□□ 0.02
SF3B2-203ENST00000524627 ASTN1O14525 1302 aa15.16■□□□□ 0.02
SF3B2-203ENST00000524627 SOWAHBA6NEL2 793 aa15.15■□□□□ 0.02
SF3B2-203ENST00000524627 CD4P01730 458 aa15.15■□□□□ 0.02
SF3B2-203ENST00000524627 FDX1P10109 184 aa15.15■□□□□ 0.02
SF3B2-203ENST00000524627 PTGS1P23219 599 aa15.15■□□□□ 0.02
SF3B2-203ENST00000524627 SLC1A4P43007 532 aa15.15■□□□□ 0.02
SF3B2-203ENST00000524627 TFAP4Q01664 338 aa15.15■□□□□ 0.02
SF3B2-203ENST00000524627 PDE4BQ07343 736 aa15.15■□□□□ 0.02
SF3B2-203ENST00000524627 TLK2Q86UE8 772 aa15.15■□□□□ 0.02
SF3B2-203ENST00000524627 CHURC1Q8WUH1 139 aa15.15■□□□□ 0.02
SF3B2-203ENST00000524627 SEC62Q99442 399 aaKnown RBP15.15■□□□□ 0.02
SF3B2-203ENST00000524627 NACAP1Q9BZK3 213 aa15.15■□□□□ 0.02
SF3B2-203ENST00000524627 IL23AQ9NPF7 189 aa15.15■□□□□ 0.02
SF3B2-203ENST00000524627 DDX49Q9Y6V7 483 aaKnown RBP15.15■□□□□ 0.02
SF3B2-203ENST00000524627 ZNF536O15090 1300 aa15.15■□□□□ 0.02
SF3B2-203ENST00000524627 ASB14A6NK59 587 aa15.14■□□□□ 0.01
SF3B2-203ENST00000524627 SLC3A2P08195 630 aaKnown RBP15.14■□□□□ 0.01
SF3B2-203ENST00000524627 ALAS1P13196 640 aa15.14■□□□□ 0.01
SF3B2-203ENST00000524627 MCCP23508 829 aa15.14■□□□□ 0.01
SF3B2-203ENST00000524627 SNAP25P60880 206 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms