RNA–Protein interactions for RNA: ENST00000524356.1

PCM1-223, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-223ENST00000524356 SNW1Q13573 536 aaKnown RBP6.79□□□□□ -1.32
PCM1-223ENST00000524356 CRIP3Q6Q6R5 217 aa6.79□□□□□ -1.32
PCM1-223ENST00000524356 SPRED1Q7Z699 444 aa6.79□□□□□ -1.32
PCM1-223ENST00000524356 ERVK13-1Q9NX77 482 aa6.79□□□□□ -1.32
PCM1-223ENST00000524356 HCFC2Q9Y5Z7 792 aa6.79□□□□□ -1.32
PCM1-223ENST00000524356 SHROOM4Q9ULL8 1493 aa6.79□□□□□ -1.32
PCM1-223ENST00000524356 DNAJA2O60884 412 aa6.78□□□□□ -1.32
PCM1-223ENST00000524356 MAPK1P28482 360 aa6.78□□□□□ -1.32
PCM1-223ENST00000524356 TARBP2Q15633 366 aaKnown RBP6.78□□□□□ -1.32
PCM1-223ENST00000524356 CARFQ8N187 725 aa6.78□□□□□ -1.32
PCM1-223ENST00000524356 KIF2CQ99661 725 aa6.78□□□□□ -1.32
PCM1-223ENST00000524356 IMPACTQ9P2X3 320 aa6.78□□□□□ -1.32
PCM1-223ENST00000524356 KLHL3Q9UH77 587 aa6.78□□□□□ -1.32
PCM1-223ENST00000524356 CUX2O14529 1486 aa6.78□□□□□ -1.32
PCM1-223ENST00000524356 RBM25P49756 843 aaKnown RBP6.77□□□□□ -1.33
PCM1-223ENST00000524356 GJA9P57773 515 aa6.77□□□□□ -1.33
PCM1-223ENST00000524356 REV1Q9UBZ9 1251 aa6.77□□□□□ -1.33
PCM1-223ENST00000524356 MINPP1Q9UNW1 487 aa6.77□□□□□ -1.33
PCM1-223ENST00000524356 A0A1W2PQ45 241 aaPredicted RBP6.76□□□□□ -1.33
PCM1-223ENST00000524356 A0A1W2PQY0 241 aa6.76□□□□□ -1.33
PCM1-223ENST00000524356 PRAMEF1O95521 474 aa6.76□□□□□ -1.33
PCM1-223ENST00000524356 NR1I3Q14994 352 aa6.76□□□□□ -1.33
PCM1-223ENST00000524356 BIN2Q9UBW5 565 aaPredicted RBP6.76□□□□□ -1.33
PCM1-223ENST00000524356 TLR6Q9Y2C9 796 aa6.76□□□□□ -1.33
PCM1-223ENST00000524356 PRR36Q9H6K5 1346 aa6.76□□□□□ -1.33
PCM1-223ENST00000524356 NBPF9Q3BBW0 867 aa6.75□□□□□ -1.33
PCM1-223ENST00000524356 PHACTR4Q8IZ21 702 aa6.75□□□□□ -1.33
PCM1-223ENST00000524356 SH3RF3Q8TEJ3 882 aaPredicted RBP6.75□□□□□ -1.33
PCM1-223ENST00000524356 DVL3Q92997 716 aaPredicted RBP6.75□□□□□ -1.33
PCM1-223ENST00000524356 JMJD8Q96S16 334 aa6.75□□□□□ -1.33
PCM1-223ENST00000524356 GZF1Q9H116 711 aaPredicted RBP6.75□□□□□ -1.33
PCM1-223ENST00000524356 TTBK1Q5TCY1 1321 aaPredicted RBP6.75□□□□□ -1.33
PCM1-223ENST00000524356 MC3RP41968 323 aa6.74□□□□□ -1.33
PCM1-223ENST00000524356 TBC1D10BQ4KMP7 808 aaPredicted RBP6.74□□□□□ -1.33
PCM1-223ENST00000524356 EAF1Q96JC9 268 aaPredicted RBP6.74□□□□□ -1.33
PCM1-223ENST00000524356 ERCC6Q03468 1493 aa6.73□□□□□ -1.33
PCM1-223ENST00000524356 ZCCHC6Q5VYS8 1495 aaKnown RBP6.73□□□□□ -1.33
PCM1-223ENST00000524356 NESP48681 1621 aa6.73□□□□□ -1.33
PCM1-223ENST00000524356 PLATP00750 562 aa6.73□□□□□ -1.33
PCM1-223ENST00000524356 MVKQ03426 396 aa6.73□□□□□ -1.33
PCM1-223ENST00000524356 CDSNQ15517 529 aa6.73□□□□□ -1.33
PCM1-223ENST00000524356 BNC2Q6ZN30 1099 aaPredicted RBP6.73□□□□□ -1.33
PCM1-223ENST00000524356 ZNF761Q86XN6 746 aaPredicted RBP6.73□□□□□ -1.33
PCM1-223ENST00000524356 TMEM52Q8NDY8 209 aa6.73□□□□□ -1.33
PCM1-223ENST00000524356 PCED1AQ9H1Q7 454 aa6.73□□□□□ -1.33
PCM1-223ENST00000524356 FAM221AA4D161 298 aa6.72□□□□□ -1.33
PCM1-223ENST00000524356 UBOX5O94941 541 aa6.72□□□□□ -1.33
PCM1-223ENST00000524356 TGM1P22735 817 aa6.72□□□□□ -1.33
PCM1-223ENST00000524356 GBP1P32455 592 aa6.72□□□□□ -1.33
PCM1-223ENST00000524356 RNF4P78317 190 aa6.72□□□□□ -1.33
PCM1-223ENST00000524356 ATP2B2Q01814 1243 aa6.72□□□□□ -1.33
PCM1-223ENST00000524356 SSBP3Q9BWW4 388 aaPredicted RBP6.72□□□□□ -1.33
PCM1-223ENST00000524356 ST6GALNAC2Q9UJ37 374 aa6.72□□□□□ -1.33
PCM1-223ENST00000524356 FAN1Q9Y2M0 1017 aa6.72□□□□□ -1.33
PCM1-223ENST00000524356 SIGLEC6O43699 453 aa6.71□□□□□ -1.34
PCM1-223ENST00000524356 FZD7O75084 574 aa6.71□□□□□ -1.34
PCM1-223ENST00000524356 HTR3BO95264 441 aa6.71□□□□□ -1.34
PCM1-223ENST00000524356 DBHP09172 617 aa6.71□□□□□ -1.34
PCM1-223ENST00000524356 NBPF12Q5TAG4 269 aaPredicted RBP6.71□□□□□ -1.34
PCM1-223ENST00000524356 CDADC1Q9BWV3 514 aa6.71□□□□□ -1.34
PCM1-223ENST00000524356 RNF38Q9H0F5 515 aa6.71□□□□□ -1.34
PCM1-223ENST00000524356 POLR3KQ9Y2Y1 108 aaPredicted RBP6.71□□□□□ -1.34
PCM1-223ENST00000524356 RGS13O14921 159 aa6.7□□□□□ -1.34
PCM1-223ENST00000524356 SRGAP3O43295 1099 aa6.7□□□□□ -1.34
PCM1-223ENST00000524356 ZNF205O95201 554 aa6.7□□□□□ -1.34
PCM1-223ENST00000524356 PAQR3Q6TCH7 311 aa6.7□□□□□ -1.34
PCM1-223ENST00000524356 ZNF747Q9BV97 191 aa6.7□□□□□ -1.34
PCM1-223ENST00000524356 DCAF1Q9Y4B6 1507 aa6.7□□□□□ -1.34
PCM1-223ENST00000524356 BPNT1O95861 308 aa6.69□□□□□ -1.34
PCM1-223ENST00000524356 CYBBP04839 570 aa6.69□□□□□ -1.34
PCM1-223ENST00000524356 EIF4BP23588 611 aaKnown RBP6.69□□□□□ -1.34
PCM1-223ENST00000524356 CTSKP43235 329 aa6.69□□□□□ -1.34
PCM1-223ENST00000524356 CHMP4BP1P59074 171 aa6.69□□□□□ -1.34
PCM1-223ENST00000524356 CCDC84Q86UT8 332 aaPredicted RBP6.69□□□□□ -1.34
PCM1-223ENST00000524356 PHC3Q8NDX5 983 aa6.69□□□□□ -1.34
PCM1-223ENST00000524356 CHST13Q8NET6 341 aa6.69□□□□□ -1.34
PCM1-223ENST00000524356 AP5S1Q9NUS5 200 aa6.69□□□□□ -1.34
PCM1-223ENST00000524356 TSC22D4Q9Y3Q8 395 aa6.69□□□□□ -1.34
PCM1-223ENST00000524356 ASGR2P07307 311 aa6.68□□□□□ -1.34
PCM1-223ENST00000524356 KLF10Q13118 480 aa6.68□□□□□ -1.34
PCM1-223ENST00000524356 NOX5Q96PH1 765 aa6.68□□□□□ -1.34
PCM1-223ENST00000524356 CHST7Q9NS84 486 aa6.68□□□□□ -1.34
PCM1-223ENST00000524356 SPATA6Q9NWH7 488 aaPredicted RBP6.68□□□□□ -1.34
PCM1-223ENST00000524356 F13A1P00488 732 aa6.67□□□□□ -1.34
PCM1-223ENST00000524356 ENDOUP21128 410 aaKnown RBP6.67□□□□□ -1.34
PCM1-223ENST00000524356 SARSP49591 514 aaKnown RBP6.67□□□□□ -1.34
PCM1-223ENST00000524356 PRR5P85299 388 aa6.67□□□□□ -1.34
PCM1-223ENST00000524356 B3GNT8Q7Z7M8 397 aa6.67□□□□□ -1.34
PCM1-223ENST00000524356 GATAD2BQ8WXI9 593 aa6.67□□□□□ -1.34
PCM1-223ENST00000524356 FRMD6Q96NE9 622 aa6.67□□□□□ -1.34
PCM1-223ENST00000524356 NCAPD3P42695 1498 aa6.66□□□□□ -1.34
PCM1-223ENST00000524356 MEIS1O00470 390 aa6.66□□□□□ -1.34
PCM1-223ENST00000524356 NCAM1P13591 858 aa6.66□□□□□ -1.34
PCM1-223ENST00000524356 BMP8BP34820 402 aa6.66□□□□□ -1.34
PCM1-223ENST00000524356 MEI1Q5TIA1 1274 aa6.66□□□□□ -1.34
PCM1-223ENST00000524356 VPS11Q9H270 941 aa6.66□□□□□ -1.34
PCM1-223ENST00000524356 NTMQ9P121 344 aa6.66□□□□□ -1.34
PCM1-223ENST00000524356 ING1Q9UK53 422 aaPredicted RBP6.66□□□□□ -1.34
PCM1-223ENST00000524356 GNA15P30679 374 aa6.65□□□□□ -1.34
PCM1-223ENST00000524356 RTP2Q5QGT7 225 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms