RNA–Protein interactions for RNA: ENST00000523962.5

NECAB1-206, Transcript of N-terminal EF-hand calcium binding protein 1, humanhuman

TSL 3

Gene NECAB1, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB1-206ENST00000523962 SYNGAP1Q96PV0 1343 aa11.72□□□□□ -0.53
NECAB1-206ENST00000523962 SYNRGQ9UMZ2 1314 aa11.72□□□□□ -0.53
NECAB1-206ENST00000523962 GRXCR1A8MXD5 290 aa11.72□□□□□ -0.53
NECAB1-206ENST00000523962 SMIM22K7EJ46 135 aa11.72□□□□□ -0.53
NECAB1-206ENST00000523962 DUSP11O75319 330 aaKnown RBP11.72□□□□□ -0.53
NECAB1-206ENST00000523962 MBD4O95243 580 aa11.72□□□□□ -0.53
NECAB1-206ENST00000523962 IFIT2P09913 472 aaKnown RBP11.72□□□□□ -0.53
NECAB1-206ENST00000523962 RLBP1P12271 317 aa11.72□□□□□ -0.53
NECAB1-206ENST00000523962 PBX2P40425 430 aa11.72□□□□□ -0.53
NECAB1-206ENST00000523962 SLC4A3P48751 1232 aa11.72□□□□□ -0.53
NECAB1-206ENST00000523962 CDK7P50613 346 aa11.72□□□□□ -0.53
NECAB1-206ENST00000523962 LSM11P83369 360 aaKnown RBP eCLIP11.72□□□□□ -0.53
NECAB1-206ENST00000523962 SLFNL1Q499Z3 407 aa11.72□□□□□ -0.53
NECAB1-206ENST00000523962 AKNAD1Q5T1N1 836 aa11.72□□□□□ -0.53
NECAB1-206ENST00000523962 C16orf86Q6ZW13 317 aa11.72□□□□□ -0.53
NECAB1-206ENST00000523962 TMEM199Q8N511 208 aa11.72□□□□□ -0.53
NECAB1-206ENST00000523962 PCSK9Q8NBP7 692 aaKnown RBP11.72□□□□□ -0.53
NECAB1-206ENST00000523962 REPS2Q8NFH8 660 aa11.72□□□□□ -0.53
NECAB1-206ENST00000523962 KHSRPQ92945 711 aaKnown RBP eCLIP11.72□□□□□ -0.53
NECAB1-206ENST00000523962 PBX4Q9BYU1 374 aa11.72□□□□□ -0.53
NECAB1-206ENST00000523962 PRDM12Q9H4Q4 367 aa11.72□□□□□ -0.53
NECAB1-206ENST00000523962 CTDP1Q9Y5B0 961 aaPredicted RBP11.72□□□□□ -0.53
NECAB1-206ENST00000523962 VCANP13611 3396 aa11.71□□□□□ -0.53
NECAB1-206ENST00000523962 ROBO3Q96MS0 1386 aa11.71□□□□□ -0.53
NECAB1-206ENST00000523962 MYADML2A6NDP7 307 aa11.71□□□□□ -0.53
NECAB1-206ENST00000523962 CCER2I3L3R5 266 aa11.71□□□□□ -0.53
NECAB1-206ENST00000523962 ARVCFO00192 962 aa11.71□□□□□ -0.53
NECAB1-206ENST00000523962 APBB1O00213 710 aa11.71□□□□□ -0.53
NECAB1-206ENST00000523962 TLR3O15455 904 aaKnown RBP11.71□□□□□ -0.53
NECAB1-206ENST00000523962 ASGR1P07306 291 aa11.71□□□□□ -0.53
NECAB1-206ENST00000523962 C6orf222P0C671 652 aaPredicted RBP11.71□□□□□ -0.53
NECAB1-206ENST00000523962 ACRP10323 421 aa11.71□□□□□ -0.53
NECAB1-206ENST00000523962 CSF2RAP15509 400 aa11.71□□□□□ -0.53
NECAB1-206ENST00000523962 ADD2P35612 726 aa11.71□□□□□ -0.53
NECAB1-206ENST00000523962 ACVR2BQ13705 512 aa11.71□□□□□ -0.53
NECAB1-206ENST00000523962 CCDC85BQ15834 202 aaPredicted RBP11.71□□□□□ -0.53
NECAB1-206ENST00000523962 SNRNP48Q6IEG0 339 aaKnown RBP11.71□□□□□ -0.53
NECAB1-206ENST00000523962 MAMDC4Q6UXC1 1216 aa11.71□□□□□ -0.53
NECAB1-206ENST00000523962 ZNF365Q70YC5 407 aa11.71□□□□□ -0.53
NECAB1-206ENST00000523962 KIF1BPQ96EK5 621 aa11.71□□□□□ -0.53
NECAB1-206ENST00000523962 ASB2Q96Q27 587 aa11.71□□□□□ -0.53
NECAB1-206ENST00000523962 SLF1Q9BQI6 1058 aa11.71□□□□□ -0.53
NECAB1-206ENST00000523962 TEX13BQ9BXU2 312 aa11.71□□□□□ -0.53
NECAB1-206ENST00000523962 BOLA2Q9H3K6 86 aa11.71□□□□□ -0.53
NECAB1-206ENST00000523962 MSRAQ9UJ68 235 aa11.71□□□□□ -0.53
NECAB1-206ENST00000523962 RIPK3Q9Y572 518 aa11.71□□□□□ -0.53
NECAB1-206ENST00000523962 SMCHD1A6NHR9 2005 aa11.7□□□□□ -0.54
NECAB1-206ENST00000523962 DNAJC25-GNG10A0A024R161 153 aa11.7□□□□□ -0.54
NECAB1-206ENST00000523962 A0A0U1RQG5 324 aaPredicted RBP11.7□□□□□ -0.54
NECAB1-206ENST00000523962 ZBED4O75132 1171 aa11.7□□□□□ -0.54
NECAB1-206ENST00000523962 IGFBP4P22692 258 aa11.7□□□□□ -0.54
NECAB1-206ENST00000523962 CST5P28325 142 aaPredicted RBP11.7□□□□□ -0.54
NECAB1-206ENST00000523962 MRPS5P82675 430 aaKnown RBP11.7□□□□□ -0.54
NECAB1-206ENST00000523962 GNASQ5JWF2 1037 aa11.7□□□□□ -0.54
NECAB1-206ENST00000523962 RASIP1Q5U651 963 aa11.7□□□□□ -0.54
NECAB1-206ENST00000523962 CTR9Q6PD62 1173 aa11.7□□□□□ -0.54
NECAB1-206ENST00000523962 PSRC1Q6PGN9 363 aaPredicted RBP11.7□□□□□ -0.54
NECAB1-206ENST00000523962 CPXCR1Q8N123 301 aa11.7□□□□□ -0.54
NECAB1-206ENST00000523962 PRPF38AQ8NAV1 312 aaKnown RBP11.7□□□□□ -0.54
NECAB1-206ENST00000523962 NUP88Q99567 741 aaPredicted RBP11.7□□□□□ -0.54
NECAB1-206ENST00000523962 PPP1R12CQ9BZL4 782 aa11.7□□□□□ -0.54
NECAB1-206ENST00000523962 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.7□□□□□ -0.54
NECAB1-206ENST00000523962 PAG1Q9NWQ8 432 aa11.7□□□□□ -0.54
NECAB1-206ENST00000523962 THEGQ9P2T0 379 aa11.7□□□□□ -0.54
NECAB1-206ENST00000523962 SLC4A4Q9Y6R1 1079 aa11.7□□□□□ -0.54
NECAB1-206ENST00000523962 SPTBN5Q9NRC6 3674 aaKnown RBP11.7□□□□□ -0.54
NECAB1-206ENST00000523962 F5H6K3 240 aa11.69□□□□□ -0.54
NECAB1-206ENST00000523962 FGBP02675 491 aa11.69□□□□□ -0.54
NECAB1-206ENST00000523962 GJA9P57773 515 aa11.69□□□□□ -0.54
NECAB1-206ENST00000523962 KLRC3Q07444 240 aa11.69□□□□□ -0.54
NECAB1-206ENST00000523962 RAB30Q15771 203 aa11.69□□□□□ -0.54
NECAB1-206ENST00000523962 CCDC144BQ3MJ40 725 aa11.69□□□□□ -0.54
NECAB1-206ENST00000523962 ANKRD35Q8N283 1001 aa11.69□□□□□ -0.54
NECAB1-206ENST00000523962 IL27Q8NEV9 243 aa11.69□□□□□ -0.54
NECAB1-206ENST00000523962 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.69□□□□□ -0.54
NECAB1-206ENST00000523962 ABHD16BQ9H3Z7 469 aa11.69□□□□□ -0.54
NECAB1-206ENST00000523962 IL23AQ9NPF7 189 aa11.69□□□□□ -0.54
NECAB1-206ENST00000523962 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.69□□□□□ -0.54
NECAB1-206ENST00000523962 RAPGEFL1Q9UHV5 662 aa11.69□□□□□ -0.54
NECAB1-206ENST00000523962 PRUNE2Q8WUY3 3088 aa11.69□□□□□ -0.54
NECAB1-206ENST00000523962 EYSQ5T1H1 3165 aa11.69□□□□□ -0.54
NECAB1-206ENST00000523962 ATP5JP18859 108 aa11.68□□□□□ -0.54
NECAB1-206ENST00000523962 CYP2C18P33260 490 aa11.68□□□□□ -0.54
NECAB1-206ENST00000523962 ADGRE1Q14246 886 aa11.68□□□□□ -0.54
NECAB1-206ENST00000523962 UBE3CQ15386 1083 aa11.68□□□□□ -0.54
NECAB1-206ENST00000523962 FAM126BQ8IXS8 530 aa11.68□□□□□ -0.54
NECAB1-206ENST00000523962 STK11IPQ8N1F8 1099 aa11.68□□□□□ -0.54
NECAB1-206ENST00000523962 ADAMTS19Q8TE59 1207 aa11.68□□□□□ -0.54
NECAB1-206ENST00000523962 HERVK_113Q902F9 699 aa11.68□□□□□ -0.54
NECAB1-206ENST00000523962 KIFC2Q96AC6 838 aa11.68□□□□□ -0.54
NECAB1-206ENST00000523962 UHRF1Q96T88 793 aaPredicted RBP11.68□□□□□ -0.54
NECAB1-206ENST00000523962 UPF3AQ9H1J1 476 aaKnown RBP11.68□□□□□ -0.54
NECAB1-206ENST00000523962 MTIF3Q9H2K0 278 aaKnown RBP11.68□□□□□ -0.54
NECAB1-206ENST00000523962 NKX2-4Q9H2Z4 354 aa11.68□□□□□ -0.54
NECAB1-206ENST00000523962 SLC28A3Q9HAS3 691 aa11.68□□□□□ -0.54
NECAB1-206ENST00000523962 MKNK2Q9HBH9 465 aa11.68□□□□□ -0.54
NECAB1-206ENST00000523962 RAVER2Q9HCJ3 691 aaKnown RBP11.68□□□□□ -0.54
NECAB1-206ENST00000523962 NYAP2Q9P242 653 aa11.68□□□□□ -0.54
NECAB1-206ENST00000523962 CLIP2Q9UDT6 1046 aa11.68□□□□□ -0.54
NECAB1-206ENST00000523962 TTC28Q96AY4 2481 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms