RNA–Protein interactions for RNA: ENST00000523824.5

NSMCE2-213, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-213ENST00000523824 KLRC3Q07444 240 aa9.52□□□□□ -0.89
NSMCE2-213ENST00000523824 ADGRE1Q14246 886 aa9.52□□□□□ -0.89
NSMCE2-213ENST00000523824 NOL8Q76FK4 1167 aaKnown RBP9.52□□□□□ -0.89
NSMCE2-213ENST00000523824 FAM126BQ8IXS8 530 aa9.52□□□□□ -0.89
NSMCE2-213ENST00000523824 HERVK_113Q902F9 699 aa9.52□□□□□ -0.89
NSMCE2-213ENST00000523824 KIFC2Q96AC6 838 aa9.52□□□□□ -0.89
NSMCE2-213ENST00000523824 KIF1BPQ96EK5 621 aa9.52□□□□□ -0.89
NSMCE2-213ENST00000523824 UPF3AQ9H1J1 476 aaKnown RBP9.52□□□□□ -0.89
NSMCE2-213ENST00000523824 NKX2-4Q9H2Z4 354 aa9.52□□□□□ -0.89
NSMCE2-213ENST00000523824 MKNK2Q9HBH9 465 aa9.52□□□□□ -0.89
NSMCE2-213ENST00000523824 CCER2I3L3R5 266 aa9.51□□□□□ -0.89
NSMCE2-213ENST00000523824 ATP2A1O14983 1001 aa9.51□□□□□ -0.89
NSMCE2-213ENST00000523824 ZSCAN25Q6NSZ9 544 aa9.51□□□□□ -0.89
NSMCE2-213ENST00000523824 CTR9Q6PD62 1173 aa9.51□□□□□ -0.89
NSMCE2-213ENST00000523824 OTOP2Q7RTS6 562 aa9.51□□□□□ -0.89
NSMCE2-213ENST00000523824 STK11IPQ8N1F8 1099 aa9.51□□□□□ -0.89
NSMCE2-213ENST00000523824 MICALL1Q8N3F8 863 aa9.51□□□□□ -0.89
NSMCE2-213ENST00000523824 FAM122AQ96E09 287 aa9.51□□□□□ -0.89
NSMCE2-213ENST00000523824 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.51□□□□□ -0.89
NSMCE2-213ENST00000523824 RAVER2Q9HCJ3 691 aaKnown RBP9.51□□□□□ -0.89
NSMCE2-213ENST00000523824 CXXC1Q9P0U4 656 aaPredicted RBP9.51□□□□□ -0.89
NSMCE2-213ENST00000523824 NYAP2Q9P242 653 aa9.51□□□□□ -0.89
NSMCE2-213ENST00000523824 FBXO40Q9UH90 709 aa9.51□□□□□ -0.89
NSMCE2-213ENST00000523824 CHD9Q3L8U1 2897 aa9.5□□□□□ -0.89
NSMCE2-213ENST00000523824 ADCY6O43306 1168 aa9.5□□□□□ -0.89
NSMCE2-213ENST00000523824 HMMRO75330 724 aa9.5□□□□□ -0.89
NSMCE2-213ENST00000523824 NDUFB10O96000 172 aa9.5□□□□□ -0.89
NSMCE2-213ENST00000523824 CD4P01730 458 aa9.5□□□□□ -0.89
NSMCE2-213ENST00000523824 ATP5JP18859 108 aa9.5□□□□□ -0.89
NSMCE2-213ENST00000523824 CCL23P55773 120 aa9.5□□□□□ -0.89
NSMCE2-213ENST00000523824 BEX3Q00994 111 aa9.5□□□□□ -0.89
NSMCE2-213ENST00000523824 TNFAIP2Q03169 654 aa9.5□□□□□ -0.89
NSMCE2-213ENST00000523824 UBE3CQ15386 1083 aa9.5□□□□□ -0.89
NSMCE2-213ENST00000523824 ARMCX2Q7L311 632 aa9.5□□□□□ -0.89
NSMCE2-213ENST00000523824 CCDC144CPQ8IYA2 1237 aa9.5□□□□□ -0.89
NSMCE2-213ENST00000523824 RPUSD2Q8IZ73 545 aaKnown RBP9.5□□□□□ -0.89
NSMCE2-213ENST00000523824 CHST13Q8NET6 341 aa9.5□□□□□ -0.89
NSMCE2-213ENST00000523824 AP5M1Q9H0R1 490 aa9.5□□□□□ -0.89
NSMCE2-213ENST00000523824 HIPK3Q9H422 1215 aa9.5□□□□□ -0.89
NSMCE2-213ENST00000523824 SLC38A10Q9HBR0 1119 aa9.5□□□□□ -0.89
NSMCE2-213ENST00000523824 ARPP21Q9UBL0 812 aaPredicted RBP9.5□□□□□ -0.89
NSMCE2-213ENST00000523824 CLIP2Q9UDT6 1046 aa9.5□□□□□ -0.89
NSMCE2-213ENST00000523824 FEM1BQ9UK73 627 aa9.5□□□□□ -0.89
NSMCE2-213ENST00000523824 YBX2Q9Y2T7 364 aaKnown RBP9.5□□□□□ -0.89
NSMCE2-213ENST00000523824 COL11A1P12107 1806 aaPredicted RBP9.49□□□□□ -0.89
NSMCE2-213ENST00000523824 PLXNA1Q9UIW2 1896 aa9.49□□□□□ -0.89
NSMCE2-213ENST00000523824 MINDY4BA8MYZ0 360 aa9.49□□□□□ -0.89
NSMCE2-213ENST00000523824 PITPNM1O00562 1244 aa9.49□□□□□ -0.89
NSMCE2-213ENST00000523824 CTAGE5O15320 804 aa9.49□□□□□ -0.89
NSMCE2-213ENST00000523824 ZEB2O60315 1214 aa9.49□□□□□ -0.89
NSMCE2-213ENST00000523824 RAB11FIP3O75154 756 aa9.49□□□□□ -0.89
NSMCE2-213ENST00000523824 CABYRO75952 493 aa9.49□□□□□ -0.89
NSMCE2-213ENST00000523824 CHGBP05060 677 aa9.49□□□□□ -0.89
NSMCE2-213ENST00000523824 RASA1P20936 1047 aa9.49□□□□□ -0.89
NSMCE2-213ENST00000523824 PLA2G5P39877 138 aa9.49□□□□□ -0.89
NSMCE2-213ENST00000523824 RABGGTBP53611 331 aa9.49□□□□□ -0.89
NSMCE2-213ENST00000523824 SKIV2LQ15477 1246 aaKnown RBP9.49□□□□□ -0.89
NSMCE2-213ENST00000523824 PPP2R2DQ66LE6 453 aa9.49□□□□□ -0.89
NSMCE2-213ENST00000523824 CXCL17Q6UXB2 119 aa9.49□□□□□ -0.89
NSMCE2-213ENST00000523824 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.49□□□□□ -0.89
NSMCE2-213ENST00000523824 ZNF444Q8N0Y2 327 aaPredicted RBP9.49□□□□□ -0.89
NSMCE2-213ENST00000523824 PANK1Q8TE04 598 aa9.49□□□□□ -0.89
NSMCE2-213ENST00000523824 HAUS7Q99871 368 aa9.49□□□□□ -0.89
NSMCE2-213ENST00000523824 C1QTNF1Q9BXJ1 281 aa9.49□□□□□ -0.89
NSMCE2-213ENST00000523824 PUS7LQ9H0K6 701 aaKnown RBP9.49□□□□□ -0.89
NSMCE2-213ENST00000523824 HOMER2Q9NSB8 354 aa9.49□□□□□ -0.89
NSMCE2-213ENST00000523824 SLC4A7Q9Y6M7 1214 aa9.49□□□□□ -0.89
NSMCE2-213ENST00000523824 ZBED9Q6R2W3 1325 aa9.49□□□□□ -0.89
NSMCE2-213ENST00000523824 PARP14Q460N5 1801 aa9.48□□□□□ -0.89
NSMCE2-213ENST00000523824 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.48□□□□□ -0.89
NSMCE2-213ENST00000523824 ASB14A6NK59 587 aa9.48□□□□□ -0.89
NSMCE2-213ENST00000523824 ZBBXA8MT70 800 aa9.48□□□□□ -0.89
NSMCE2-213ENST00000523824 DYNC1LI2O43237 492 aaPredicted RBP9.48□□□□□ -0.89
NSMCE2-213ENST00000523824 OAZ1P54368 228 aa9.48□□□□□ -0.89
NSMCE2-213ENST00000523824 NKX3-2P78367 333 aa9.48□□□□□ -0.89
NSMCE2-213ENST00000523824 CNTN2Q02246 1040 aa9.48□□□□□ -0.89
NSMCE2-213ENST00000523824 ITGA7Q13683 1181 aa9.48□□□□□ -0.89
NSMCE2-213ENST00000523824 FSCN1Q16658 493 aaKnown RBP9.48□□□□□ -0.89
NSMCE2-213ENST00000523824 AAK1Q2M2I8 961 aa9.48□□□□□ -0.89
NSMCE2-213ENST00000523824 SBK1Q52WX2 424 aa9.48□□□□□ -0.89
NSMCE2-213ENST00000523824 RPAP2Q8IXW5 612 aaPredicted RBP9.48□□□□□ -0.89
NSMCE2-213ENST00000523824 SLC43A3Q8NBI5 491 aa9.48□□□□□ -0.89
NSMCE2-213ENST00000523824 FGD4Q96M96 766 aa9.48□□□□□ -0.89
NSMCE2-213ENST00000523824 NECAB3Q96P71 396 aaPredicted RBP9.48□□□□□ -0.89
NSMCE2-213ENST00000523824 SEZ6LQ9BYH1 1024 aa9.48□□□□□ -0.89
NSMCE2-213ENST00000523824 TRPV6Q9H1D0 765 aa9.48□□□□□ -0.89
NSMCE2-213ENST00000523824 ZNF287Q9HBT7 754 aa9.48□□□□□ -0.89
NSMCE2-213ENST00000523824 ISY1Q9ULR0 285 aaKnown RBP9.48□□□□□ -0.89
NSMCE2-213ENST00000523824 UMODL1Q5DID0 1318 aa9.48□□□□□ -0.89
NSMCE2-213ENST00000523824 MYH8P13535 1937 aa9.48□□□□□ -0.89
NSMCE2-213ENST00000523824 GTPBP6O43824 516 aaPredicted RBP9.47□□□□□ -0.89
NSMCE2-213ENST00000523824 FDX1P10109 184 aa9.47□□□□□ -0.89
NSMCE2-213ENST00000523824 BMP3P12645 472 aa9.47□□□□□ -0.89
NSMCE2-213ENST00000523824 BMP1P13497 986 aa9.47□□□□□ -0.89
NSMCE2-213ENST00000523824 MYOGP15173 224 aa9.47□□□□□ -0.89
NSMCE2-213ENST00000523824 TFF2Q03403 129 aa9.47□□□□□ -0.89
NSMCE2-213ENST00000523824 GIMAP6Q6P9H5 292 aa9.47□□□□□ -0.89
NSMCE2-213ENST00000523824 TLK2Q86UE8 772 aa9.47□□□□□ -0.89
NSMCE2-213ENST00000523824 FAM133AQ8N9E0 248 aa9.47□□□□□ -0.89
NSMCE2-213ENST00000523824 MKL1Q969V6 931 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms