RNA–Protein interactions for RNA: ENST00000523765.1

LAMA4-220, Transcript of laminin subunit alpha 4, humanhuman

TSL 5

Gene LAMA4, Length 1,054 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-220ENST00000523765 CST5P28325 142 aaPredicted RBP11.78□□□□□ -0.52
LAMA4-220ENST00000523765 MTX1Q13505 466 aa11.78□□□□□ -0.52
LAMA4-220ENST00000523765 TTLL4Q14679 1199 aa11.78□□□□□ -0.52
LAMA4-220ENST00000523765 MAGEB6Q8N7X4 407 aa11.78□□□□□ -0.52
LAMA4-220ENST00000523765 MB21D1Q8N884 522 aa11.78□□□□□ -0.52
LAMA4-220ENST00000523765 REPS2Q8NFH8 660 aa11.78□□□□□ -0.52
LAMA4-220ENST00000523765 SCLYQ96I15 445 aa11.78□□□□□ -0.52
LAMA4-220ENST00000523765 FGD4Q96M96 766 aa11.78□□□□□ -0.52
LAMA4-220ENST00000523765 GLT1D1Q96MS3 346 aa11.78□□□□□ -0.52
LAMA4-220ENST00000523765 TRPV6Q9H1D0 765 aa11.78□□□□□ -0.52
LAMA4-220ENST00000523765 ANTXR1Q9H6X2 564 aa11.78□□□□□ -0.52
LAMA4-220ENST00000523765 SMC4Q9NTJ3 1288 aa11.78□□□□□ -0.52
LAMA4-220ENST00000523765 ZNF214Q9UL59 606 aaPredicted RBP11.78□□□□□ -0.52
LAMA4-220ENST00000523765 FAM184BQ9ULE4 1060 aa11.78□□□□□ -0.52
LAMA4-220ENST00000523765 NOB1Q9ULX3 412 aaKnown RBP11.78□□□□□ -0.52
LAMA4-220ENST00000523765 DIS3Q9Y2L1 958 aaKnown RBP11.78□□□□□ -0.52
LAMA4-220ENST00000523765 RIPK3Q9Y572 518 aa11.78□□□□□ -0.52
LAMA4-220ENST00000523765 MROH7Q68CQ1 1323 aa11.78□□□□□ -0.52
LAMA4-220ENST00000523765 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.77□□□□□ -0.53
LAMA4-220ENST00000523765 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.77□□□□□ -0.53
LAMA4-220ENST00000523765 LPXNO60711 386 aa11.77□□□□□ -0.53
LAMA4-220ENST00000523765 DUSP11O75319 330 aaKnown RBP11.77□□□□□ -0.53
LAMA4-220ENST00000523765 SLC25A27O95847 323 aa11.77□□□□□ -0.53
LAMA4-220ENST00000523765 KCTD2Q14681 263 aa11.77□□□□□ -0.53
LAMA4-220ENST00000523765 PDCD7Q8N8D1 485 aaKnown RBP11.77□□□□□ -0.53
LAMA4-220ENST00000523765 HLA-CQ95604 372 aa11.77□□□□□ -0.53
LAMA4-220ENST00000523765 DYNLL2Q96FJ2 89 aa11.77□□□□□ -0.53
LAMA4-220ENST00000523765 ZFP91Q96JP5 570 aaPredicted RBP11.77□□□□□ -0.53
LAMA4-220ENST00000523765 PHOX2BQ99453 314 aa11.77□□□□□ -0.53
LAMA4-220ENST00000523765 RIOK1Q9BRS2 568 aaKnown RBP11.77□□□□□ -0.53
LAMA4-220ENST00000523765 UPF3AQ9H1J1 476 aaKnown RBP11.77□□□□□ -0.53
LAMA4-220ENST00000523765 HIPK3Q9H422 1215 aa11.77□□□□□ -0.53
LAMA4-220ENST00000523765 SCUBE2Q9NQ36 999 aa11.77□□□□□ -0.53
LAMA4-220ENST00000523765 RCAN3Q9UKA8 241 aa11.77□□□□□ -0.53
LAMA4-220ENST00000523765 TNNQ9UQP3 1299 aa11.77□□□□□ -0.53
LAMA4-220ENST00000523765 CNPY2Q9Y2B0 182 aa11.77□□□□□ -0.53
LAMA4-220ENST00000523765 SLC4A7Q9Y6M7 1214 aa11.77□□□□□ -0.53
LAMA4-220ENST00000523765 ASTN1O14525 1302 aa11.77□□□□□ -0.53
LAMA4-220ENST00000523765 BAZ2AQ9UIF9 1905 aaKnown RBP11.76□□□□□ -0.53
LAMA4-220ENST00000523765 DNAJC25-GNG10A0A024R161 153 aa11.76□□□□□ -0.53
LAMA4-220ENST00000523765 ZBBXA8MT70 800 aa11.76□□□□□ -0.53
LAMA4-220ENST00000523765 PRR33A8MZF0 331 aa11.76□□□□□ -0.53
LAMA4-220ENST00000523765 VWA5AO00534 786 aa11.76□□□□□ -0.53
LAMA4-220ENST00000523765 IDH1O75874 414 aaKnown RBP11.76□□□□□ -0.53
LAMA4-220ENST00000523765 ATP2A2P16615 1042 aaKnown RBP11.76□□□□□ -0.53
LAMA4-220ENST00000523765 GJA9P57773 515 aa11.76□□□□□ -0.53
LAMA4-220ENST00000523765 CCDC144BQ3MJ40 725 aa11.76□□□□□ -0.53
LAMA4-220ENST00000523765 TNNI3KQ59H18 835 aa11.76□□□□□ -0.53
LAMA4-220ENST00000523765 GNASQ5JWF2 1037 aa11.76□□□□□ -0.53
LAMA4-220ENST00000523765 TMEM63BQ5T3F8 832 aa11.76□□□□□ -0.53
LAMA4-220ENST00000523765 CXCL17Q6UXB2 119 aa11.76□□□□□ -0.53
LAMA4-220ENST00000523765 TTC6Q86TZ1 520 aa11.76□□□□□ -0.53
LAMA4-220ENST00000523765 SLC43A3Q8NBI5 491 aa11.76□□□□□ -0.53
LAMA4-220ENST00000523765 FBXL18Q96ME1 805 aa11.76□□□□□ -0.53
LAMA4-220ENST00000523765 NOC4LQ9BVI4 516 aaKnown RBP11.76□□□□□ -0.53
LAMA4-220ENST00000523765 COG5Q9UP83 839 aa11.76□□□□□ -0.53
LAMA4-220ENST00000523765 TMX2Q9Y320 296 aa11.76□□□□□ -0.53
LAMA4-220ENST00000523765 DDX49Q9Y6V7 483 aaKnown RBP11.76□□□□□ -0.53
LAMA4-220ENST00000523765 FPGT-TNNI3KV9GXZ4 949 aa11.76□□□□□ -0.53
LAMA4-220ENST00000523765 B4GALT4O60513 344 aa11.75□□□□□ -0.53
LAMA4-220ENST00000523765 POLR3DP05423 398 aaPredicted RBP11.75□□□□□ -0.53
LAMA4-220ENST00000523765 AKR1B1P15121 316 aa11.75□□□□□ -0.53
LAMA4-220ENST00000523765 STAT3P40763 770 aa11.75□□□□□ -0.53
LAMA4-220ENST00000523765 RRP1P56182 461 aaKnown RBP11.75□□□□□ -0.53
LAMA4-220ENST00000523765 TAP1Q03518 808 aa11.75□□□□□ -0.53
LAMA4-220ENST00000523765 GRB10Q13322 594 aa11.75□□□□□ -0.53
LAMA4-220ENST00000523765 ACVR2BQ13705 512 aa11.75□□□□□ -0.53
LAMA4-220ENST00000523765 ALDH1L2Q3SY69 923 aa11.75□□□□□ -0.53
LAMA4-220ENST00000523765 MAMDC4Q6UXC1 1216 aa11.75□□□□□ -0.53
LAMA4-220ENST00000523765 ARNTL2Q8WYA1 636 aa11.75□□□□□ -0.53
LAMA4-220ENST00000523765 AGBL1Q96MI9 1066 aa11.75□□□□□ -0.53
LAMA4-220ENST00000523765 KATNBL1Q9H079 304 aa11.75□□□□□ -0.53
LAMA4-220ENST00000523765 VCPKMTQ9H867 229 aa11.75□□□□□ -0.53
LAMA4-220ENST00000523765 MYO15AQ9UKN7 3530 aa11.74□□□□□ -0.53
LAMA4-220ENST00000523765 E9PSI1 815 aa11.74□□□□□ -0.53
LAMA4-220ENST00000523765 WDR46O15213 610 aaKnown RBP11.74□□□□□ -0.53
LAMA4-220ENST00000523765 TLR3O15455 904 aaKnown RBP11.74□□□□□ -0.53
LAMA4-220ENST00000523765 GTPBP6O43824 516 aaPredicted RBP11.74□□□□□ -0.53
LAMA4-220ENST00000523765 PSMC6P62333 389 aa11.74□□□□□ -0.53
LAMA4-220ENST00000523765 G3BP1Q13283 466 aaKnown RBP eCLIP11.74□□□□□ -0.53
LAMA4-220ENST00000523765 TMEM67Q5HYA8 995 aa11.74□□□□□ -0.53
LAMA4-220ENST00000523765 TRMT2AQ8IZ69 625 aaKnown RBP11.74□□□□□ -0.53
LAMA4-220ENST00000523765 PCSK9Q8NBP7 692 aaKnown RBP11.74□□□□□ -0.53
LAMA4-220ENST00000523765 UIMC1Q96RL1 719 aa11.74□□□□□ -0.53
LAMA4-220ENST00000523765 NUP88Q99567 741 aaPredicted RBP11.74□□□□□ -0.53
LAMA4-220ENST00000523765 MTIF3Q9H2K0 278 aaKnown RBP11.74□□□□□ -0.53
LAMA4-220ENST00000523765 OCEL1Q9H607 264 aa11.74□□□□□ -0.53
LAMA4-220ENST00000523765 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.74□□□□□ -0.53
LAMA4-220ENST00000523765 DBNLQ9UJU6 430 aaKnown RBP11.74□□□□□ -0.53
LAMA4-220ENST00000523765 BRWD1Q9NSI6 2320 aa11.74□□□□□ -0.53
LAMA4-220ENST00000523765 CYP2D7A0A087X1C5 515 aa11.73□□□□□ -0.53
LAMA4-220ENST00000523765 IL9P15248 144 aa11.73□□□□□ -0.53
LAMA4-220ENST00000523765 ICA1Q05084 483 aa11.73□□□□□ -0.53
LAMA4-220ENST00000523765 ITGA7Q13683 1181 aa11.73□□□□□ -0.53
LAMA4-220ENST00000523765 CCDC158Q5M9N0 1113 aa11.73□□□□□ -0.53
LAMA4-220ENST00000523765 FAM83BQ5T0W9 1011 aa11.73□□□□□ -0.53
LAMA4-220ENST00000523765 TMEM179Q6ZVK1 233 aa11.73□□□□□ -0.53
LAMA4-220ENST00000523765 TMCO2Q7Z6W1 182 aaPredicted RBP11.73□□□□□ -0.53
LAMA4-220ENST00000523765 DEFB128Q7Z7B8 93 aa11.73□□□□□ -0.53
LAMA4-220ENST00000523765 PPP1R13LQ8WUF5 828 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms