RNA–Protein interactions for RNA: ENST00000523702.5

CPS1-211, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 4

Gene CPS1, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-211ENST00000523702 MKNK2Q9HBH9 465 aa8.12□□□□□ -1.11
CPS1-211ENST00000523702 CYP26B1Q9NR63 512 aa8.12□□□□□ -1.11
CPS1-211ENST00000523702 PIM2Q9P1W9 311 aa8.12□□□□□ -1.11
CPS1-211ENST00000523702 SF3B6Q9Y3B4 125 aaKnown RBP8.12□□□□□ -1.11
CPS1-211ENST00000523702 STXBP3O00186 592 aa8.11□□□□□ -1.11
CPS1-211ENST00000523702 TGFB1P01137 390 aa8.11□□□□□ -1.11
CPS1-211ENST00000523702 GSNP06396 782 aa8.11□□□□□ -1.11
CPS1-211ENST00000523702 CD3EP07766 207 aa8.11□□□□□ -1.11
CPS1-211ENST00000523702 VAV1P15498 845 aa8.11□□□□□ -1.11
CPS1-211ENST00000523702 HOXC12P31275 282 aa8.11□□□□□ -1.11
CPS1-211ENST00000523702 ECI1P42126 302 aa8.11□□□□□ -1.11
CPS1-211ENST00000523702 AMPD2Q01433 879 aa8.11□□□□□ -1.11
CPS1-211ENST00000523702 SCRN1Q12765 414 aa8.11□□□□□ -1.11
CPS1-211ENST00000523702 GAB4Q2WGN9 574 aa8.11□□□□□ -1.11
CPS1-211ENST00000523702 ZC3H12BQ5HYM0 836 aaKnown RBP8.11□□□□□ -1.11
CPS1-211ENST00000523702 GPATCH3Q96I76 525 aa8.11□□□□□ -1.11
CPS1-211ENST00000523702 FEZ1Q99689 392 aa8.11□□□□□ -1.11
CPS1-211ENST00000523702 NCOA5Q9HCD5 579 aaKnown RBP8.11□□□□□ -1.11
CPS1-211ENST00000523702 GPATCH2Q9NW75 528 aa8.11□□□□□ -1.11
CPS1-211ENST00000523702 GSC2O15499 205 aa8.1□□□□□ -1.11
CPS1-211ENST00000523702 CLSTN1O94985 981 aa8.1□□□□□ -1.11
CPS1-211ENST00000523702 SNRPB2P08579 225 aaKnown RBP8.1□□□□□ -1.11
CPS1-211ENST00000523702 KCNJ6P48051 423 aa8.1□□□□□ -1.11
CPS1-211ENST00000523702 POU4F1Q01851 419 aa8.1□□□□□ -1.11
CPS1-211ENST00000523702 RTP2Q5QGT7 225 aa8.1□□□□□ -1.11
CPS1-211ENST00000523702 SLC35F1Q5T1Q4 408 aa8.1□□□□□ -1.11
CPS1-211ENST00000523702 ZPBP2Q6X784 338 aa8.1□□□□□ -1.11
CPS1-211ENST00000523702 DHX37Q8IY37 1157 aaKnown RBP8.1□□□□□ -1.11
CPS1-211ENST00000523702 SLC7A14Q8TBB6 771 aa8.1□□□□□ -1.11
CPS1-211ENST00000523702 NETO1Q8TDF5 533 aa8.1□□□□□ -1.11
CPS1-211ENST00000523702 COPS5Q92905 334 aa8.1□□□□□ -1.11
CPS1-211ENST00000523702 FOXP3Q9BZS1 431 aa8.1□□□□□ -1.11
CPS1-211ENST00000523702 ATP13A1Q9HD20 1204 aa8.1□□□□□ -1.11
CPS1-211ENST00000523702 IFT57Q9NWB7 429 aa8.1□□□□□ -1.11
CPS1-211ENST00000523702 TMEFF2Q9UIK5 374 aaPredicted RBP8.1□□□□□ -1.11
CPS1-211ENST00000523702 AURKAO14965 403 aa8.09□□□□□ -1.11
CPS1-211ENST00000523702 ESR1P03372 595 aa8.09□□□□□ -1.11
CPS1-211ENST00000523702 SCG5P05408 212 aa8.09□□□□□ -1.11
CPS1-211ENST00000523702 SYPP08247 313 aa8.09□□□□□ -1.11
CPS1-211ENST00000523702 FOSL1P15407 271 aa8.09□□□□□ -1.11
CPS1-211ENST00000523702 BMP8BP34820 402 aa8.09□□□□□ -1.11
CPS1-211ENST00000523702 CD96P40200 585 aa8.09□□□□□ -1.11
CPS1-211ENST00000523702 PABPC4Q13310 644 aaKnown RBP eCLIP8.09□□□□□ -1.11
CPS1-211ENST00000523702 PRSS36Q5K4E3 855 aa8.09□□□□□ -1.11
CPS1-211ENST00000523702 CRACR2BQ8N4Y2 399 aaPredicted RBP8.09□□□□□ -1.11
CPS1-211ENST00000523702 FRS2Q8WU20 508 aa8.09□□□□□ -1.11
CPS1-211ENST00000523702 ASXL2Q76L83 1435 aa8.09□□□□□ -1.11
CPS1-211ENST00000523702 PITPNM2Q9BZ72 1349 aa8.08□□□□□ -1.12
CPS1-211ENST00000523702 CCDC163A0A0D9SF12 145 aa8.08□□□□□ -1.12
CPS1-211ENST00000523702 C2orf71A6NGG8 1288 aa8.08□□□□□ -1.12
CPS1-211ENST00000523702 THBDP07204 575 aa8.08□□□□□ -1.12
CPS1-211ENST00000523702 SDSP20132 328 aa8.08□□□□□ -1.12
CPS1-211ENST00000523702 MASP1P48740 699 aa8.08□□□□□ -1.12
CPS1-211ENST00000523702 BNIP3Q12983 259 aa8.08□□□□□ -1.12
CPS1-211ENST00000523702 IFI16Q16666 785 aaKnown RBP8.08□□□□□ -1.12
CPS1-211ENST00000523702 CWF19L1Q69YN2 538 aaKnown RBP8.08□□□□□ -1.12
CPS1-211ENST00000523702 FILIP1Q7Z7B0 1213 aa8.08□□□□□ -1.12
CPS1-211ENST00000523702 IPO9Q96P70 1041 aaKnown RBP8.08□□□□□ -1.12
CPS1-211ENST00000523702 TRIT1Q9H3H1 467 aaKnown RBP8.08□□□□□ -1.12
CPS1-211ENST00000523702 PCDHA11Q9Y5I1 949 aa8.08□□□□□ -1.12
CPS1-211ENST00000523702 PLD2O14939 933 aa8.07□□□□□ -1.12
CPS1-211ENST00000523702 FKTNO75072 461 aa8.07□□□□□ -1.12
CPS1-211ENST00000523702 ZNF205O95201 554 aa8.07□□□□□ -1.12
CPS1-211ENST00000523702 GSTM1P09488 218 aa8.07□□□□□ -1.12
CPS1-211ENST00000523702 ITGB7P26010 798 aa8.07□□□□□ -1.12
CPS1-211ENST00000523702 CLCN7P51798 805 aa8.07□□□□□ -1.12
CPS1-211ENST00000523702 SUMO1P63165 101 aaKnown RBP8.07□□□□□ -1.12
CPS1-211ENST00000523702 KCNT2Q6UVM3 1135 aa8.07□□□□□ -1.12
CPS1-211ENST00000523702 CREG2Q8IUH2 290 aa8.07□□□□□ -1.12
CPS1-211ENST00000523702 LINC00116Q8NCU8 138 aa8.07□□□□□ -1.12
CPS1-211ENST00000523702 KCTD13Q8WZ19 329 aa8.07□□□□□ -1.12
CPS1-211ENST00000523702 CCDC140Q96MF4 163 aa8.07□□□□□ -1.12
CPS1-211ENST00000523702 PUS7Q96PZ0 661 aaKnown RBP8.07□□□□□ -1.12
CPS1-211ENST00000523702 SEMA6BQ9H3T3 888 aa8.07□□□□□ -1.12
CPS1-211ENST00000523702 AP5S1Q9NUS5 200 aa8.07□□□□□ -1.12
CPS1-211ENST00000523702 DUSP13Q9UII6 198 aa8.07□□□□□ -1.12
CPS1-211ENST00000523702 TCFL5Q9UL49 500 aa8.07□□□□□ -1.12
CPS1-211ENST00000523702 TRAF6Q9Y4K3 522 aa8.07□□□□□ -1.12
CPS1-211ENST00000523702 TMEM265A0A087WTH1 108 aa8.06□□□□□ -1.12
CPS1-211ENST00000523702 TMEM82A0PJX8 343 aa8.06□□□□□ -1.12
CPS1-211ENST00000523702 IRS4O14654 1257 aaPredicted RBP8.06□□□□□ -1.12
CPS1-211ENST00000523702 MED26O95402 600 aa8.06□□□□□ -1.12
CPS1-211ENST00000523702 MAP4K2Q12851 820 aa8.06□□□□□ -1.12
CPS1-211ENST00000523702 CPSF6Q16630 551 aaKnown RBP eCLIP8.06□□□□□ -1.12
CPS1-211ENST00000523702 AOC3Q16853 763 aa8.06□□□□□ -1.12
CPS1-211ENST00000523702 THAP5Q7Z6K1 395 aa8.06□□□□□ -1.12
CPS1-211ENST00000523702 CCDC103Q8IW40 242 aa8.06□□□□□ -1.12
CPS1-211ENST00000523702 SYNPOQ8N3V7 929 aa8.06□□□□□ -1.12
CPS1-211ENST00000523702 NPLOC4Q8TAT6 608 aa8.06□□□□□ -1.12
CPS1-211ENST00000523702 NINJ1Q92982 152 aa8.06□□□□□ -1.12
CPS1-211ENST00000523702 SLC52A2Q9HAB3 445 aa8.06□□□□□ -1.12
CPS1-211ENST00000523702 SNX11Q9Y5W9 270 aa8.06□□□□□ -1.12
CPS1-211ENST00000523702 NISCHQ9Y2I1 1504 aa8.05□□□□□ -1.12
CPS1-211ENST00000523702 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.05□□□□□ -1.12
CPS1-211ENST00000523702 RFPL3O75679 317 aa8.05□□□□□ -1.12
CPS1-211ENST00000523702 PLS3P13797 630 aa8.05□□□□□ -1.12
CPS1-211ENST00000523702 NOP2P46087 812 aaKnown RBP8.05□□□□□ -1.12
CPS1-211ENST00000523702 CEBPAP49715 358 aaPredicted RBP8.05□□□□□ -1.12
CPS1-211ENST00000523702 MSMPQ1L6U9 139 aa8.05□□□□□ -1.12
CPS1-211ENST00000523702 FNDC3BQ53EP0 1204 aaKnown RBP8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms